Literature DB >> 24320512

Texture analysis improves level set segmentation of the anterior abdominal wall.

Zhoubing Xu1, Wade M Allen, Rebeccah B Baucom, Benjamin K Poulose, Bennett A Landman.   

Abstract

PURPOSE: The treatment of ventral hernias (VH) has been a challenging problem for medical care. Repair of these hernias is fraught with failure; recurrence rates ranging from 24% to 43% have been reported, even with the use of biocompatible mesh. Currently, computed tomography (CT) is used to guide intervention through expert, but qualitative, clinical judgments, notably, quantitative metrics based on image-processing are not used. The authors propose that image segmentation methods to capture the three-dimensional structure of the abdominal wall and its abnormalities will provide a foundation on which to measure geometric properties of hernias and surrounding tissues and, therefore, to optimize intervention.
METHODS: In this study with 20 clinically acquired CT scans on postoperative patients, the authors demonstrated a novel approach to geometric classification of the abdominal. The authors' approach uses a texture analysis based on Gabor filters to extract feature vectors and follows a fuzzy c-means clustering method to estimate voxelwise probability memberships for eight clusters. The memberships estimated from the texture analysis are helpful to identify anatomical structures with inhomogeneous intensities. The membership was used to guide the level set evolution, as well as to derive an initial start close to the abdominal wall.
RESULTS: Segmentation results on abdominal walls were both quantitatively and qualitatively validated with surface errors based on manually labeled ground truth. Using texture, mean surface errors for the outer surface of the abdominal wall were less than 2 mm, with 91% of the outer surface less than 5 mm away from the manual tracings; errors were significantly greater (2-5 mm) for methods that did not use the texture.
CONCLUSIONS: The authors' approach establishes a baseline for characterizing the abdominal wall for improving VH care. Inherent texture patterns in CT scans are helpful to the tissue classification, and texture analysis can improve the level set segmentation around the abdominal region.

Entities:  

Mesh:

Year:  2013        PMID: 24320512      PMCID: PMC3838426          DOI: 10.1118/1.4828791

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  18 in total

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Authors:  S Herlidou; Y Rolland; J Y Bansard; E Le Rumeur; J D de Certaines
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2.  A global optimisation method for robust affine registration of brain images.

Authors:  M Jenkinson; S Smith
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3.  A comparison of suture repair with mesh repair for incisional hernia.

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Journal:  N Engl J Med       Date:  2000-08-10       Impact factor: 91.245

Review 4.  Texture analysis of medical images.

Authors:  G Castellano; L Bonilha; L M Li; F Cendes
Journal:  Clin Radiol       Date:  2004-12       Impact factor: 2.350

5.  Extraction and tracking of MRI tagging sheets using a 3D Gabor filter bank.

Authors:  Zhen Qian; Dimitris N Metaxas; Leon Axel
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2006

Review 6.  Quantitative imaging biomarkers in the clinical development of targeted therapeutics: current and future perspectives.

Authors:  James P B O'Connor; Alan Jackson; Marie-Claude Asselin; David L Buckley; Geoff J M Parker; Gordon C Jayson
Journal:  Lancet Oncol       Date:  2008-08       Impact factor: 41.316

7.  Texture discrimination by Gabor functions.

Authors:  M R Turner
Journal:  Biol Cybern       Date:  1986       Impact factor: 2.086

Review 8.  Development of biomarkers in multiple sclerosis.

Authors:  Bibiana Bielekova; Roland Martin
Journal:  Brain       Date:  2004-06-04       Impact factor: 13.501

9.  Quantitative Anatomical Labeling of the Anterior Abdominal Wall.

Authors:  Wade M Allen; Zhoubing Xu; Andrew J Asman; Benjamin K Poulose; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-28

10.  A randomized clinical trial comparing two methods of fascia closure following midline laparotomy.

Authors:  J B Trimbos; I B Smit; J P Holm; J Hermans
Journal:  Arch Surg       Date:  1992-10
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  3 in total

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Authors:  Zhoubing Xu; Benjamin N Conrad; Rebeccah B Baucom; Seth A Smith; Benjamin K Poulose; Bennett A Landman
Journal:  J Med Imaging (Bellingham)       Date:  2016-08-26

2.  Whole Abdominal Wall Segmentation using Augmented Active Shape Models (AASM) with Multi-Atlas Label Fusion and Level Set.

Authors:  Zhoubing Xu; Rebeccah B Baucom; Richard G Abramson; Benjamin K Poulose; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-21

3.  Quantitative CT Imaging of Ventral Hernias: Preliminary Validation of an Anatomical Labeling Protocol.

Authors:  Zhoubing Xu; Andrew J Asman; Rebeccah B Baucom; Richard G Abramson; Benjamin K Poulose; Bennett A Landman
Journal:  PLoS One       Date:  2015-10-28       Impact factor: 3.240

  3 in total

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