Literature DB >> 27126360

Prediction models for platinum-based chemotherapy response and toxicity in advanced NSCLC patients.

Ji-Ye Yin1, Xi Li2, Xiang-Ping Li3, Ling Xiao3, Wei Zheng3, Juan Chen3, Chen-Xue Mao3, Chao Fang3, Jia-Jia Cui3, Cheng-Xian Guo4, Wei Zhang2, Yang Gao5, Chun-Fang Zhang5, Zi-Hua Chen6, Hui Zhou7, Hong-Hao Zhou2, Zhao-Qian Liu8.   

Abstract

In this study, we aimed to establish a platinum-based chemotherapy response and toxicity prediction model in advanced non-small cell lung cancer (NSCLC) patients. 416 single nucleotide polymorphisms (SNPs) in 185 genes were genotyped, and their association with drug response and toxicity were estimated using logistic regression. Nine data mining techniques were employed to establish the prediction model; the sensitivity, specificity, overall accuracy and receiver operating characteristic (ROC) curve were used to assess the models' performance. Finally, selected models were validated in an independent cohort. The models established by naïve Bayesian algorithm had the best performance. The response prediction model achieved a sensitivity of 0.90 and a specificity of 0.47 with the ROC area under curve (AUC) of 0.80. The overall toxicity prediction model achieved a sensitivity of 0.86 and a specificity of 0.46 with the ROC AUC of 0.73. The hematological toxicity prediction model achieved a sensitivity of 0.89 and a specificity of 0.39 with the ROC AUC of 0.76. The gastrointestinal toxicity prediction model achieved a sensitivity of 0.93 and a specificity of 0.35 with the ROC AUC of 0.80. In conclusion, we provided platinum-based chemotherapy response and toxicity prediction models for advanced NSCLC patients.
Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

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Keywords:  Data mining; NSCLC; Platinum; Response; SNP; Toxicity

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Year:  2016        PMID: 27126360     DOI: 10.1016/j.canlet.2016.04.029

Source DB:  PubMed          Journal:  Cancer Lett        ISSN: 0304-3835            Impact factor:   8.679


  9 in total

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2.  Prognostic value of patient-reported outcome measures (PROMs) in adults with non-small cell Lung Cancer: a scoping review.

Authors:  Kuan Liao; Tianxiao Wang; Jake Coomber-Moore; David C Wong; Fabio Gomes; Corinne Faivre-Finn; Matthew Sperrin; Janelle Yorke; Sabine N van der Veer
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3.  A radiomics prognostic scoring system for predicting progression-free survival in patients with stage IV non-small cell lung cancer treated with platinum-based chemotherapy.

Authors:  Lan He; Zhenhui Li; Xin Chen; Yanqi Huang; Lixu Yan; Changhong Liang; Zaiyi Liu
Journal:  Chin J Cancer Res       Date:  2021-10-31       Impact factor: 4.026

4.  Sequential Whole Exome Sequencing Reveals Somatic Mutations Associated with Platinum Response in NSCLC.

Authors:  Ao-Xiang Guo; Fan Xiao; Wei-Hua Shao; Yan Zhan; Le Zhang; Jing Xiong; Yang Gao; Ji-Ye Yin
Journal:  Onco Targets Ther       Date:  2020-07-03       Impact factor: 4.147

5.  The P38α rs3804451 Variant Predicts Chemotherapy Response and Survival of Patients with Non-Small Cell Lung Cancer Treated with Platinum-Based Chemotherapy.

Authors:  Ming Jia; Yuan Xu; Meiling Zhu; Mengyun Wang; Menghong Sun; Ji Qian; Jianhua Chang; Qingyi Wei
Journal:  Transl Oncol       Date:  2016-11-08       Impact factor: 4.243

6.  Genome-scale analysis identifies NEK2, DLGAP5 and ECT2 as promising diagnostic and prognostic biomarkers in human lung cancer.

Authors:  Yuan-Xiang Shi; Ji-Ye Yin; Yao Shen; Wei Zhang; Hong-Hao Zhou; Zhao-Qian Liu
Journal:  Sci Rep       Date:  2017-08-14       Impact factor: 4.379

7.  Gene-gene and gene-environment interactions influence platinum-based chemotherapy response and toxicity in non-small cell lung cancer patients.

Authors:  Jia-Jia Cui; Lei-Yun Wang; Tao Zhu; Wei-Jing Gong; Hong-Hao Zhou; Zhao-Qian Liu; Ji-Ye Yin
Journal:  Sci Rep       Date:  2017-07-11       Impact factor: 4.379

8.  Gene-gene and gene-environment interaction data for platinum-based chemotherapy in non-small cell lung cancer.

Authors:  Lei-Yun Wang; Jia-Jia Cui; Jun-Yan Liu; Ao-Xiang Guo; Zhen-Yu Zhao; Ying-Zi Liu; Ji-Chu Wu; Min Li; Cheng-Ping Hu; Yang Gao; Hong-Hao Zhou; Ji-Ye Yin
Journal:  Sci Data       Date:  2018-12-11       Impact factor: 6.444

9.  Genome-wide analysis identify novel germline genetic variations in ADCY1 influencing platinum-based chemotherapy response in non-small cell lung cancer.

Authors:  Chenxue Mao; Juan Chen; Ting Zou; Yuankang Zhou; Junyan Liu; Xi Li; Xiangping Li; Min Li; Pinhua Pan; Wei Zhuo; Yang Gao; Shuo Hu; Desheng Xiao; Lin Wu; Zhan Wang; Heng Xu; Wen Yang; Yingjie Xu; Haihua Xiao; Kazuhiko Hanada; Wei Zhang; Honghao Zhou; Jiye Yin; Zhaoqian Liu
Journal:  Acta Pharm Sin B       Date:  2021-10-16       Impact factor: 14.903

  9 in total

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