| Literature DB >> 27123964 |
Luke R Lloyd-Jones1, Hien D Nguyen2, Geoffrey J McLachlan2, Wayne Sumpton3, You-Gan Wang4.
Abstract
Understanding how aquatic species grow is fundamental in fisheries because stock assessment often relies on growth dependent statistical models. Length-frequency-based methods become important when more applicable data for growth model estimation are either not available or very expensive. In this article, we develop a new framework for growth estimation from length-frequency data using a generalized von Bertalanffy growth model (VBGM) framework that allows for time-dependent covariates to be incorporated. A finite mixture of normal distributions is used to model the length-frequency cohorts of each month with the means constrained to follow a VBGM. The variances of the finite mixture components are constrained to be a function of mean length, reducing the number of parameters and allowing for an estimate of the variance at any length. To optimize the likelihood, we use a minorization-maximization (MM) algorithm with a Nelder-Mead sub-step. This work was motivated by the decline in catches of the blue swimmer crab (BSC) (Portunus armatus) off the east coast of Queensland, Australia. We test the method with a simulation study and then apply it to the BSC fishery data.Entities:
Keywords: Blue swimmer crab; Growth model estimation; Length-frequency data; Minorization-maximization algorithm; Mixture modeling
Mesh:
Year: 2016 PMID: 27123964 DOI: 10.1111/biom.12531
Source DB: PubMed Journal: Biometrics ISSN: 0006-341X Impact factor: 2.571