Literature DB >> 27123964

Mixture of time-dependent growth models with an application to blue swimmer crab length-frequency data.

Luke R Lloyd-Jones1, Hien D Nguyen2, Geoffrey J McLachlan2, Wayne Sumpton3, You-Gan Wang4.   

Abstract

Understanding how aquatic species grow is fundamental in fisheries because stock assessment often relies on growth dependent statistical models. Length-frequency-based methods become important when more applicable data for growth model estimation are either not available or very expensive. In this article, we develop a new framework for growth estimation from length-frequency data using a generalized von Bertalanffy growth model (VBGM) framework that allows for time-dependent covariates to be incorporated. A finite mixture of normal distributions is used to model the length-frequency cohorts of each month with the means constrained to follow a VBGM. The variances of the finite mixture components are constrained to be a function of mean length, reducing the number of parameters and allowing for an estimate of the variance at any length. To optimize the likelihood, we use a minorization-maximization (MM) algorithm with a Nelder-Mead sub-step. This work was motivated by the decline in catches of the blue swimmer crab (BSC) (Portunus armatus) off the east coast of Queensland, Australia. We test the method with a simulation study and then apply it to the BSC fishery data.
© 2016, The International Biometric Society.

Entities:  

Keywords:  Blue swimmer crab; Growth model estimation; Length-frequency data; Minorization-maximization algorithm; Mixture modeling

Mesh:

Year:  2016        PMID: 27123964     DOI: 10.1111/biom.12531

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  1 in total

1.  A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture.

Authors:  Shipeng Dong; Dapeng Liu; Boshan Zhu; Liye Yu; Hongwei Shan; Fang Wang
Journal:  Animals (Basel)       Date:  2022-07-18       Impact factor: 3.231

  1 in total

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