Literature DB >> 27118418

Automated sample preparation in a microfluidic culture device for cellular metabolomics.

Laura A Filla1, Katherine L Sanders, Robert T Filla, James L Edwards.   

Abstract

Sample pretreatment in conventional cellular metabolomics entails rigorous lysis and extraction steps which increase the duration as well as limit the consistency of these experiments. We report a biomimetic cell culture microfluidic device (MFD) which is coupled with an automated system for rapid, reproducible cell lysis using a combination of electrical and chemical mechanisms. In-channel microelectrodes were created using facile fabrication methods, enabling the application of electric fields up to 1000 V cm(-1). Using this platform, average lysing times were 7.12 s and 3.03 s for chips with no electric fields and electric fields above 200 V cm(-1), respectively. Overall, the electroporation MFDs yielded a ∼10-fold improvement in lysing time over standard chemical approaches. Detection of multiple intracellular nucleotides and energy metabolites in MFD lysates was demonstrated using two different MS platforms. This work will allow for the integrated culture, automated lysis, and metabolic analysis of cells in an MFD which doubles as a biomimetic model of the vasculature.

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Year:  2016        PMID: 27118418      PMCID: PMC4902300          DOI: 10.1039/c6an00237d

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  30 in total

Review 1.  Fabrication of microfluidic systems in poly(dimethylsiloxane).

Authors:  J C McDonald; D C Duffy; J R Anderson; D T Chiu; H Wu; O J Schueller; G M Whitesides
Journal:  Electrophoresis       Date:  2000-01       Impact factor: 3.535

2.  Solvent compatibility of poly(dimethylsiloxane)-based microfluidic devices.

Authors:  Jessamine Ng Lee; Cheolmin Park; George M Whitesides
Journal:  Anal Chem       Date:  2003-12-01       Impact factor: 6.986

3.  Complexity of human circulation design: tips for students.

Authors:  Sven Kurbel; Mario Gros; Svjetlana Maric
Journal:  Adv Physiol Educ       Date:  2009-06       Impact factor: 2.288

4.  All electronic approach for high-throughput cell trapping and lysis with electrical impedance monitoring.

Authors:  Shideh Kabiri Ameri; Pramod K Singh; Mehmet R Dokmeci; Ali Khademhosseini; Qiaobing Xu; Sameer R Sonkusale
Journal:  Biosens Bioelectron       Date:  2013-11-18       Impact factor: 10.618

5.  Metabolomic analysis of eukaryotic tissue and prokaryotes using negative mode MALDI time-of-flight mass spectrometry.

Authors:  James L Edwards; Robert T Kennedy
Journal:  Anal Chem       Date:  2005-04-01       Impact factor: 6.986

6.  Thiol metabolomics of endothelial cells using capillary liquid chromatography mass spectrometry with isotope coded affinity tags.

Authors:  Wei Yuan; James L Edwards
Journal:  J Chromatogr A       Date:  2011-03-02       Impact factor: 4.759

7.  Characterization of cell lysis events on a microfluidic device for high-throughput single cell analysis.

Authors:  Amy D Hargis; Jean Pierre Alarie; John Michael Ramsey
Journal:  Electrophoresis       Date:  2011-10-25       Impact factor: 3.535

8.  Bacterial chromosome extraction and isolation.

Authors:  Christelle Prinz; Jonas O Tegenfeldt; Robert H Austin; Edward C Cox; James C Sturm
Journal:  Lab Chip       Date:  2002-11-07       Impact factor: 6.799

Review 9.  Diabetic neuropathy: mechanisms to management.

Authors:  James L Edwards; Andrea M Vincent; Hsinlin T Cheng; Eva L Feldman
Journal:  Pharmacol Ther       Date:  2008-06-13       Impact factor: 12.310

10.  Decreased glycolytic and tricarboxylic acid cycle intermediates coincide with peripheral nervous system oxidative stress in a murine model of type 2 diabetes.

Authors:  Lucy M Hinder; Anuradha Vivekanandan-Giri; Lisa L McLean; Subramaniam Pennathur; Eva L Feldman
Journal:  J Endocrinol       Date:  2013-01-02       Impact factor: 4.286

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  3 in total

1.  Sample-to-analysis platform for rapid intracellular mass spectrometry from small numbers of cells.

Authors:  Austin L Culberson; Mason A Chilmonczyk; Peter A Kottke; Annie C Bowles-Welch; Delta Ghoshal; Andrei G Fedorov
Journal:  Lab Chip       Date:  2021-11-25       Impact factor: 6.799

2.  Microfluidic Irreversible Electroporation-A Versatile Tool to Extract Intracellular Contents of Bacteria and Yeast.

Authors:  Alexander Rockenbach; Suresh Sudarsan; Judith Berens; Michael Kosubek; Jaroslav Lazar; Philipp Demling; René Hanke; Philip Mennicken; Birgitta E Ebert; Lars M Blank; Uwe Schnakenberg
Journal:  Metabolites       Date:  2019-09-30

Review 3.  Metabolomics-Guided Elucidation of Plant Abiotic Stress Responses in the 4IR Era: An Overview.

Authors:  Morena M Tinte; Kekeletso H Chele; Justin J J van der Hooft; Fidele Tugizimana
Journal:  Metabolites       Date:  2021-07-08
  3 in total

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