Literature DB >> 27103383

Beryllium-induced lung disease exhibits expression profiles similar to sarcoidosis.

Li Li1, Lori J Silveira2, Nabeel Hamzeh3, May Gillespie2, Peggy M Mroz2, Annyce S Mayer4, Tasha E Fingerlin2, Lisa A Maier4.   

Abstract

A subset of beryllium-exposed workers develop beryllium sensitisation (BeS) which precedes chronic beryllium disease (CBD). We conducted an in-depth analysis of differentially expressed candidate genes in CBD.We performed Affymetrix GeneChip 1.0 ST array analysis on peripheral blood mononuclear cells (PBMCs) from 10 CBD, 10 BeS and 10 beryllium-exposed, nondiseased controls stimulated with BeSO4 or medium. The differentially expressed genes were validated by high-throughput real-time PCR in this group and in an additional group of cases and nonexposed controls. The functional roles of the top candidate genes in CBD were assessed using a pharmacological inhibitor. CBD gene expression data were compared with whole blood and lung tissue in sarcoidosis from the Gene Expression Omnibus.We confirmed almost 450 genes that were significantly differentially expressed between CBD and controls. The top enrichment of genes was for JAK (Janus kinase)-STAT (signal transducer and activator of transcription) signalling. A JAK2 inhibitor significantly decreased tumour necrosis factor-α and interferon-γ production. Furthermore, we found 287 differentially expressed genes overlapped in CBD/sarcoidosis. The top shared pathways included cytokine-cytokine receptor interactions, and Toll-like receptor, chemokine and JAK-STAT signalling pathways.We show that PBMCs demonstrate differentially expressed gene profiles relevant to the immunnopathogenesis of CBD. CBD and sarcoidosis share similar differential expression of pathogenic genes and pathways.
Copyright ©ERS 2016.

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Year:  2016        PMID: 27103383      PMCID: PMC5134922          DOI: 10.1183/13993003.01469-2015

Source DB:  PubMed          Journal:  Eur Respir J        ISSN: 0903-1936            Impact factor:   16.671


  46 in total

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Review 2.  Stats: multifaceted regulators of transcription.

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3.  TNF polymorphism and bronchoalveolar lavage cell TNF-alpha levels in chronic beryllium disease and beryllium sensitization.

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4.  Beryllium-specific CD4+ T cells in blood as a biomarker of disease progression.

Authors:  Allison K Martin; Douglas G Mack; Michael T Falta; Margaret M Mroz; Lee S Newman; Lisa A Maier; Andrew P Fontenot
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Review 5.  Ruxolitinib, an oral JAK1 and JAK2 inhibitor, in myelofibrosis.

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6.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

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7.  Common patterns and disease-related signatures in tuberculosis and sarcoidosis.

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10.  Beryllium increases the CD14(dim)CD16+ subset in the lung of chronic beryllium disease.

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Journal:  Nat Rev Drug Discov       Date:  2017-11-06       Impact factor: 84.694

2.  JAK inhibition as a therapeutic strategy for immune and inflammatory diseases.

Authors:  Daniella M Schwartz; Yuka Kanno; Alejandro Villarino; Michael Ward; Massimo Gadina; John J O'Shea
Journal:  Nat Rev Drug Discov       Date:  2017-12-28       Impact factor: 84.694

3.  Age-associated B Cells Appear in Patients with Granulomatous Lung Diseases.

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Journal:  Am J Respir Crit Care Med       Date:  2020-10-01       Impact factor: 21.405

4.  Beryllium-specific CD4+ T cells induced by chemokine neoantigens perpetuate inflammation.

Authors:  Michael T Falta; Jeremy C Crawford; Alex N Tinega; Laurie G Landry; Frances Crawford; Douglas G Mack; Allison K Martin; Shaikh M Atif; Li Li; Radleigh G Santos; Maki Nakayama; John W Kappler; Lisa A Maier; Paul G Thomas; Clemencia Pinilla; Andrew P Fontenot
Journal:  J Clin Invest       Date:  2021-05-03       Impact factor: 14.808

5.  Genomic biomarkers in chronic beryllium disease and sarcoidosis.

Authors:  Nancy W Lin; Lisa A Maier; Margaret M Mroz; Sean Jacobson; Kristyn MacPhail; Sucai Liu; Zhe Lei; Briana Q Barkes; Tasha E Fingerlin; Nabeel Hamzeh; Annyce S Mayer; Clara I Restrepo; Divya Chhabra; Ivana V Yang; Li Li
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6.  Proteomic characteristics of beryllium sulfate-induced differentially expressed proteins in rats.

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Review 7.  Innate and Adaptive Immunity in Noninfectious Granulomatous Lung Disease.

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Journal:  J Immunol       Date:  2022-04-15       Impact factor: 5.426

8.  DNA Methylation Changes in Lung Immune Cells Are Associated with Granulomatous Lung Disease.

Authors:  Ivana V Yang; Iain Konigsberg; Kristyn MacPhail; Li Li; Elizabeth J Davidson; Peggy M Mroz; Nabeel Hamzeh; May Gillespie; Lori J Silveira; Tasha E Fingerlin; Lisa A Maier
Journal:  Am J Respir Cell Mol Biol       Date:  2019-01       Impact factor: 6.914

9.  Single-cell RNA sequencing identifies macrophage transcriptional heterogeneities in granulomatous diseases.

Authors:  Shu-Yi Liao; Shaikh M Atif; Kara Mould; Iain R Konigsberg; Rui Fu; Elizabeth Davidson; Li Li; Andrew P Fontenot; Lisa A Maier; Ivana V Yang
Journal:  Eur Respir J       Date:  2021-06-17       Impact factor: 16.671

10.  Polymorphism of FCGR3A gene in chronic beryllium disease.

Authors:  Bing Liu; Lisa A Maier; Nabeel Hamzeh; Kristyn MacPhail; Margaret M Mroz; Hongbo Liu; Li Li
Journal:  Genes Immun       Date:  2018-09-24       Impact factor: 2.676

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