Literature DB >> 27102963

A CRISPR Path to Engineering New Genetic Mouse Models for Cardiovascular Research.

Joseph M Miano1, Qiuyu Martin Zhu2, Charles J Lowenstein2.   

Abstract

Previous efforts to target the mouse genome for the addition, subtraction, or substitution of biologically informative sequences required complex vector design and a series of arduous steps only a handful of laboratories could master. The facile and inexpensive clustered regularly interspaced short palindromic repeats (CRISPR) method has now superseded traditional means of genome modification such that virtually any laboratory can quickly assemble reagents for developing new mouse models for cardiovascular research. Here, we briefly review the history of CRISPR in prokaryotes, highlighting major discoveries leading to its formulation for genome modification in the animal kingdom. Core components of CRISPR technology are reviewed and updated. Practical pointers for 2-component and 3-component CRISPR editing are summarized with many applications in mice including frameshift mutations, deletion of enhancers and noncoding genes, nucleotide substitution of protein-coding and gene regulatory sequences, incorporation of loxP sites for conditional gene inactivation, and epitope tag integration. Genotyping strategies are presented and topics of genetic mosaicism and inadvertent targeting discussed. Finally, clinical applications and ethical considerations are addressed as the biomedical community eagerly embraces this astonishing innovation in genome editing to tackle previously intractable questions.
© 2016 American Heart Association, Inc.

Entities:  

Keywords:  epitope; frameshift mutation; genetics; genome editing; genotype; nucleotide

Mesh:

Substances:

Year:  2016        PMID: 27102963      PMCID: PMC4882230          DOI: 10.1161/ATVBAHA.116.304790

Source DB:  PubMed          Journal:  Arterioscler Thromb Vasc Biol        ISSN: 1079-5642            Impact factor:   8.311


  149 in total

1.  Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria.

Authors:  F J Mojica; C Díez-Villaseñor; E Soria; G Juez
Journal:  Mol Microbiol       Date:  2000-04       Impact factor: 3.501

2.  Identification of genes that are associated with DNA repeats in prokaryotes.

Authors:  Ruud Jansen; Jan D A van Embden; Wim Gaastra; Leo M Schouls
Journal:  Mol Microbiol       Date:  2002-03       Impact factor: 3.501

3.  Directed evolution of the site specificity of Cre recombinase.

Authors:  Stephen W Santoro; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

4.  The human genome browser at UCSC.

Authors:  W James Kent; Charles W Sugnet; Terrence S Furey; Krishna M Roskin; Tom H Pringle; Alan M Zahler; David Haussler
Journal:  Genome Res       Date:  2002-06       Impact factor: 9.043

5.  Targeted chromosomal cleavage and mutagenesis in Drosophila using zinc-finger nucleases.

Authors:  Marina Bibikova; Mary Golic; Kent G Golic; Dana Carroll
Journal:  Genetics       Date:  2002-07       Impact factor: 4.562

Review 6.  Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics.

Authors:  Lynne E Maquat
Journal:  Nat Rev Mol Cell Biol       Date:  2004-02       Impact factor: 94.444

7.  Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements.

Authors:  Francisco J M Mojica; César Díez-Villaseñor; Jesús García-Martínez; Elena Soria
Journal:  J Mol Evol       Date:  2005-02       Impact factor: 2.395

8.  Multiple promoters direct expression of three AKAP12 isoforms with distinct subcellular and tissue distribution profiles.

Authors:  Jeffrey W Streb; Chad M Kitchen; Irwin H Gelman; Joseph M Miano
Journal:  J Biol Chem       Date:  2004-10-20       Impact factor: 5.157

9.  Adeno-associated virus (AAV)-7 and -8 poorly transduce vascular endothelial cells and are sensitive to proteasomal degradation.

Authors:  L Denby; S A Nicklin; A H Baker
Journal:  Gene Ther       Date:  2005-10       Impact factor: 5.250

10.  Targeted mutagenesis of the endogenous mouse Mis gene promoter: in vivo definition of genetic pathways of vertebrate sexual development.

Authors:  N A Arango; R Lovell-Badge; R R Behringer
Journal:  Cell       Date:  1999-11-12       Impact factor: 41.582

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  23 in total

1.  The ethics of genome editing in non-human animals: a systematic review of reasons reported in the academic literature.

Authors:  Nienke de Graeff; Karin R Jongsma; Josephine Johnston; Sarah Hartley; Annelien L Bredenoord
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-05-13       Impact factor: 6.237

Review 2.  Challenges and Opportunities in Linking Long Noncoding RNAs to Cardiovascular, Lung, and Blood Diseases.

Authors:  Jane E Freedman; Joseph M Miano
Journal:  Arterioscler Thromb Vasc Biol       Date:  2016-11-17       Impact factor: 8.311

3.  CRISPR-Mediated Single Nucleotide Polymorphism Modeling in Rats Reveals Insight Into Reduced Cardiovascular Risk Associated With Mediterranean G6PD Variant.

Authors:  Atsushi Kitagawa; Igor Kizub; Christina Jacob; Kevin Michael; Angelo D'Alessandro; Julie A Reisz; Michael Grzybowski; Aron M Geurts; Petra Rocic; Rakhee Gupte; Joseph M Miano; Sachin A Gupte
Journal:  Hypertension       Date:  2020-06-08       Impact factor: 10.190

Review 4.  CRISPR-Cas9 Genome Editing for Treatment of Atherogenic Dyslipidemia.

Authors:  Alexandra C Chadwick; Kiran Musunuru
Journal:  Arterioscler Thromb Vasc Biol       Date:  2017-08-24       Impact factor: 8.311

5.  Loss of LMOD1 impairs smooth muscle cytocontractility and causes megacystis microcolon intestinal hypoperistalsis syndrome in humans and mice.

Authors:  Danny Halim; Michael P Wilson; Daniel Oliver; Erwin Brosens; Joke B G M Verheij; Yu Han; Vivek Nanda; Qing Lyu; Michael Doukas; Hans Stoop; Rutger W W Brouwer; Wilfred F J van IJcken; Orazio J Slivano; Alan J Burns; Christine K Christie; Karen L de Mesy Bentley; Alice S Brooks; Dick Tibboel; Suowen Xu; Zheng Gen Jin; Tono Djuwantono; Wei Yan; Maria M Alves; Robert M W Hofstra; Joseph M Miano
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-14       Impact factor: 11.205

6.  CRISPR-Cas9-Mediated Epitope Tagging Provides Accurate and Versatile Assessment of Myocardin-Brief Report.

Authors:  Qing Lyu; Vidhi Dhagia; Yu Han; Bing Guo; Mary E Wines-Samuelson; Christine K Christie; Qiangzong Yin; Orazio J Slivano; Paul Herring; Xiaochun Long; Sachin A Gupte; Joseph M Miano
Journal:  Arterioscler Thromb Vasc Biol       Date:  2018-09       Impact factor: 8.311

Review 7.  Relevance of mouse models of cardiac fibrosis and hypertrophy in cardiac research.

Authors:  Vikrant Rai; Poonam Sharma; Swati Agrawal; Devendra K Agrawal
Journal:  Mol Cell Biochem       Date:  2016-10-20       Impact factor: 3.396

Review 8.  Making ends meet: targeted integration of DNA fragments by genome editing.

Authors:  Yutaka Yamamoto; Susan A Gerbi
Journal:  Chromosoma       Date:  2018-07-12       Impact factor: 4.316

Review 9.  Genome Editing: The Recent History and Perspective in Cardiovascular Diseases.

Authors:  Kiran Musunuru
Journal:  J Am Coll Cardiol       Date:  2017-12-05       Impact factor: 24.094

10.  What Do We Really Think About Human Germline Genome Editing, and What Does It Mean for Medicine?

Authors:  Kiran Musunuru; William R Lagor; Joseph M Miano
Journal:  Circ Cardiovasc Genet       Date:  2017-10
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