Literature DB >> 27090055

G-quadruplex DNA-based asymmetric catalysis of michael addition: Effects of sonication, ligands, and co-solvents.

Hua Zhao1, Kai Shen1.   

Abstract

There is an escalating interest of using double stranded DNA molecules as a chiral scaffold to construct metal-biomacromolecule hybrid catalysts for asymmetric synthesis. Several recent studies also evaluated the use of G-quadruplex DNA-based catalysts for asymmetric Diels-Alder and Friedel-Crafts reactions. However, there is still a lack of understanding of how different oligonucleotides, salts (such as NaCl and KCl), metal ligands and co-solvents affect the catalytic performance of quadruplex DNA-based hybrid catalysts. In this study, we aim to systematically evaluate these key factors in asymmetric Michael addition reactions, and to examine the conformational and molecular changes of DNA by circular dichroism (CD) spectroscopy and gel electrophoresis. We achieved up to 95% yield and 50% enantiomeric excess (ee) when the reaction of 2-acylimidazole 1a and dimethylmalonate was catalyzed by 5'-G3 (TTAG3 )3 -3' (G4DNA1) in 20 mM MOPS (pH 6.5) containing 50 mM KCl and 40 µM [Cu(dmbipy)(NO3 )2 ], and G4DNA1 was pre-sonicated in ice bath for 10 min prior to the reaction. G-quadruplex-based hybrid catalysts provide a new tool for asymmetric catalysis, but future mechanistic studies should be sought to further improve the catalytic efficiency. The current work presents a systematic study of asymmetric Michael addition catalyzed by G-quadruplex catalysts constructed via non-covalent complexing, and an intriguing finding of the effect of pre-sonication on catalytic efficiency.
© 2016 American Institute of Chemical Engineers Biotechnol. Prog., 32:891-898, 2016. © 2016 American Institute of Chemical Engineers.

Entities:  

Keywords:  DNA-based hybrid catalyst; Michael addition; asymmetric catalysis; ionic liquid; quadruplex DNA

Mesh:

Substances:

Year:  2016        PMID: 27090055      PMCID: PMC6986171          DOI: 10.1002/btpr.2281

Source DB:  PubMed          Journal:  Biotechnol Prog        ISSN: 1520-6033


  33 in total

1.  Crystal structure of parallel quadruplexes from human telomeric DNA.

Authors:  Gary N Parkinson; Michael P H Lee; Stephen Neidle
Journal:  Nature       Date:  2002-05-26       Impact factor: 49.962

2.  Tuning the stereoselectivity of a DNA-catalyzed michael addition through covalent modification.

Authors:  Surjendu Dey; Andres Jäschke
Journal:  Angew Chem Int Ed Engl       Date:  2015-07-29       Impact factor: 15.336

3.  Alpha,beta-unsaturated 2-acyl imidazoles as a practical class of dienophiles for the DNA-based catalytic asymmetric Diels-Alder reaction in water.

Authors:  Arnold J Boersma; Ben L Feringa; Gerard Roelfes
Journal:  Org Lett       Date:  2007-08-09       Impact factor: 6.005

4.  Enantioselective Friedel-Crafts reactions in water catalyzed by a human telomeric G-quadruplex DNA metalloenzyme.

Authors:  Changhao Wang; Yinghao Li; Guoqing Jia; Yan Liu; Shengmei Lu; Can Li
Journal:  Chem Commun (Camb)       Date:  2012-05-18       Impact factor: 6.222

5.  The influence of G-quadruplex structure on DNA-based asymmetric catalysis using the G-quadruplex-bound cationic porphyrin TMPyP4·Cu.

Authors:  Michael Wilking; Ulrich Hennecke
Journal:  Org Biomol Chem       Date:  2013-09-25       Impact factor: 3.876

6.  Ionic liquids and proteases: a clean alliance for semisynthesis.

Authors:  Nicole Wehofsky; Christian Wespe; Vaclav Cerovsky; Andreas Pech; Eva Hoess; Rainer Rudolph; Frank Bordusa
Journal:  Chembiochem       Date:  2008-06-16       Impact factor: 3.164

7.  Catalytic enantioselective syn hydration of enones in water using a DNA-based catalyst.

Authors:  Arnold J Boersma; David Coquière; Danny Geerdink; Fiora Rosati; Ben L Feringa; Gerard Roelfes
Journal:  Nat Chem       Date:  2010-09-19       Impact factor: 24.427

8.  DNA-Based Asymmetric Catalysis: Role of Ionic Solvents and Glymes.

Authors:  Hua Zhao; Kai Shen
Journal:  RSC Adv       Date:  2014-01-01       Impact factor: 3.361

9.  Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers.

Authors:  Kah Wai Lim; Samir Amrane; Serge Bouaziz; Weixin Xu; Yuguang Mu; Dinshaw J Patel; Kim Ngoc Luu; Anh Tuân Phan
Journal:  J Am Chem Soc       Date:  2009-04-01       Impact factor: 15.419

10.  Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution.

Authors:  Anh Tuân Phan; Kim Ngoc Luu; Dinshaw J Patel
Journal:  Nucleic Acids Res       Date:  2006-10-12       Impact factor: 16.971

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  2 in total

1.  Encapsulation and Ultrasound-Triggered Release of G-Quadruplex DNA in Multilayer Hydrogel Microcapsules.

Authors:  Aaron Alford; Brenna Tucker; Veronika Kozlovskaya; Jun Chen; Nirzari Gupta; Racquel Caviedes; Jenna Gearhart; David Graves; Eugenia Kharlampieva
Journal:  Polymers (Basel)       Date:  2018-12-05       Impact factor: 4.329

2.  A Localized Enantioselective Catalytic Site on Short DNA Sequences and Their Amphiphiles.

Authors:  Jun Guo; Danyu Wang; Evangelia Pantatosaki; Huihui Kuang; George K Papadopoulos; Michael Tsapatsis; Efrosini Kokkoli
Journal:  JACS Au       Date:  2022-01-20
  2 in total

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