Literature DB >> 270659

Structure of proteins: packing of alpha-helices and pleated sheets.

C Chothia, M Levitt, D Richardson.   

Abstract

Simple models are presented that describe the rules for almost all the packing that occurs between and among alpha-helices and pleated sheets. These packing rules, together with the primary and secondary structures, are the major determinants of the three-dimensional structure of proteins.

Mesh：

Year:  1977        PMID： 270659      PMCID： PMC431889          DOI： 10.1073/pnas.74.10.4130

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  9 in total

1.  Alpha-carbon coordinates for bovine Cu,Zn superoxide dismutase.

Authors:  J S Richardson; K A Thomas; D C Richardson
Journal:  Biochem Biophys Res Commun       Date:  1975-04-21       Impact factor: 3.575

2.  Structural invariants in protein folding.

Authors:  C Chothia
Journal:  Nature       Date:  1975-03-27       Impact factor: 49.962

3.  Thermodynamic fluctuations in protein molecules.

Authors:  A Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  1976-08       Impact factor: 11.205

4.  Sidechain torsional potentials and motion of amino acids in porteins: bovine pancreatic trypsin inhibitor.

Authors:  B R Gelin; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1975-06       Impact factor: 11.205

5.  The polypeptide-chain configuration in hemoglobin and other globular proteins.

Authors:  L PAULING; R B COREY
Journal:  Proc Natl Acad Sci U S A       Date:  1951-05       Impact factor: 11.205

6.  The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain.

Authors:  L PAULING; R B COREY; H R BRANSON
Journal:  Proc Natl Acad Sci U S A       Date:  1951-04       Impact factor: 11.205

7.  Structural patterns in globular proteins.

Authors:  M Levitt; C Chothia
Journal:  Nature       Date:  1976-06-17       Impact factor: 49.962

8.  Conformation of twisted beta-pleated sheets in proteins.

Authors:  C Chothia
Journal:  J Mol Biol       Date:  1973-04-05       Impact factor: 5.469

9.  The interpretation of protein structures: total volume, group volume distributions and packing density.

Authors:  F M Richards
Journal:  J Mol Biol       Date:  1974-01-05       Impact factor: 5.469
  9 in total
  68 in total

1.  Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association.

Authors:  M M Javadpour; M Eilers; M Groesbeek; S O Smith
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

2.  Mechanics and dynamics of B1 domain of protein G: role of packing and surface hydrophobic residues.

Authors:  M A Ceruso; A Amadei; A Di Nola
Journal:  Protein Sci       Date:  1999-01       Impact factor: 6.725

3.  Analysis of interactive packing of secondary structural elements in alpha/beta units in proteins.

Authors:  B V Reddy; H A Nagarajaram; T L Blundell
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

4.  Comparison of helix interactions in membrane and soluble alpha-bundle proteins.

Authors:  Markus Eilers; Ashish B Patel; Wei Liu; Steven O Smith
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

5.  Interhelical angle and distance preferences in globular proteins.

Authors:  Sangyoon Lee; Gregory S Chirikjian
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

6.  Strong electrostatic loop-helix interactions in bundle motif protein structures.

Authors:  K C Chou; C Zheng
Journal:  Biophys J       Date:  1992-09       Impact factor: 4.033

7.  Uniformity, ideality, and hydrogen bonds in transmembrane alpha-helices.

Authors:  Sanguk Kim; Timothy A Cross
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

8.  The NMR solution structure of the 30S ribosomal protein S27e encoded in gene RS27_ARCFU of Archaeoglobus fulgidis reveals a novel protein fold.

Authors:  Catherine Herve du Penhoat; Hanudatta S Atreya; Yang Shen; Gaohua Liu; Thomas B Acton; Rong Xiao; Zhaohui Li; Diana Murray; Gaetano T Montelione; Thomas Szyperski
Journal:  Protein Sci       Date:  2004-05       Impact factor: 6.725

9.  Local packing modulates diversity of iron pathways and cooperative behavior in eukaryotic and prokaryotic ferritins.

Authors:  Anatoly M Ruvinsky; Ilya A Vakser; Mario Rivera
Journal:  J Chem Phys       Date:  2014-03-21       Impact factor: 3.488

10.  The tyrosine corner: a feature of most Greek key beta-barrel proteins.

Authors:  J M Hemmingsen; K M Gernert; J S Richardson; D C Richardson
Journal:  Protein Sci       Date:  1994-11       Impact factor: 6.725
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