| Literature DB >> 27064977 |
Ana Luzia Figueiredo Lacerda1, Ralf Kersanach2, Maria Cristina Silva Cortinhas1, Pedro Fernandes Sanmartin Prata1, Luiz Felipe Cestari Dumont1, Maíra Carneiro Proietti1, Rodrigo Maggioni3, Fernando D'Incao1.
Abstract
Population connectivity in the blue crab Callinectes sapidus was evaluated along 740 km of the Western South Atlantic coast. Blue crabs are the most exploited portunid in Brazil. Despite their economic importance, few studies report their ecology or population structure. Here we sampled four estuarine areas in southern Brazil during winter 2013 and summer 2014 in order to evaluate diversity, gene flow and structure of these populations. Nine microsatellite markers were evaluated for 213 adult crabs, with identification of seven polymorphic loci and 183 alleles. Pairwise FST values indicated low population structure ranging from -0.00023 to 0.01755. A Mantel test revealed that the geographic distance does not influence genetic (r = -0.48), and structure/migration rates confirmed this, showing that even the populations located at the opposite extremities of our covered region presented low FST and exchanged migrants. These findings show that there is a significant amount of gene flow between blue crab populations in South Brazil, likely influenced by local current dynamics that allow the transport of a high number of larvae between estuaries. Considering the elevated gene flow, the populations can be considered a single genetic stock. However, further information on population size and dynamics, as well as fishery demands and impacts at different regions, are necessary for harvest management purposes.Entities:
Mesh:
Year: 2016 PMID: 27064977 PMCID: PMC4827853 DOI: 10.1371/journal.pone.0153124
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Callinectes sapidus sampling areas in the Western South Atlantic.
LPA = Lagoa dos Patos; TRA = Tramandaí; LAG = Laguna; ITA = Itajaí.
Coordinates and sample sizes of study areas in winter 2013 and summer 2014.
| Location | Abbreviation | Latitude | Longitude | Sample size | |
|---|---|---|---|---|---|
| Winter (W) | Summer (S) | ||||
| LPA | 32°02’23.91”S | 52°07’43.32”O | 30 | 28 | |
| TRA | 29°58’56.29”S | 50°08’22.69”O | 34 | - | |
| LAG | 28°29’02.13”S | 48°47’12.35”O | 31 | 36 | |
| ITA | 26°54’32.80”S | 48°39’02.28”O | 21 | 33 | |
Sequences and annealing temperature T (°C) of forward (F) and reverse (R) primers used in PCRs, with underlined sequence in M13 tail, as well as fluorescent dye labels used for genotyping.
| Locus name | Primer sequence (5–3’) | Repeat motif | Anelling Temperature | Label |
|---|---|---|---|---|
| CSC-001 | F: | (CCTT)14 | 55°C | 6-FAM™ |
| R: ACGAGGAGAAAGTTGAGATTGC | ||||
| CSC-004 | F: | (TG)16 | 58°C | VIC® |
| R: AGGCTAATGCCACCATCATC | ||||
| CSC-007 | F: T | (GA)35 | 59°C | PET® |
| R: GAAAACCTATTCCGGGAAGC | ||||
| CSC-074 | F: | (GT)6 | 60°C | VIC® |
| R: CAAAGATGCCCCCTTATTTACC | ||||
| CSC-094 | F: | (TCTG)6 | 64°C | VIC® |
| R: GGAGAAACACCCTCAGAAAACC | ||||
| CSA-035 | F: | (GT)29 | 46°C | NED™ |
| R: AACAAGGAGATTACACGGATTC | ||||
| CSA-073 | F: | (GT)57 | 55°C | NED™ |
| R:GTCACCAAAGTTGAGCAAGACTCTCT | ||||
| CSA-092 | F: | (GT)13 | 52°C | 6-FAM™ |
| R: CTTCCATCCTAAACCACACCTGC | ||||
| CSA-121 | F: | (AGAC)9 | 56°C | PET® |
| R: AACTGCTTGCCTTCCTTCCATC |
Number of alleles to same seven loci found in this study and in Steven et al., (2005), as well as private alleles in this study, separated by pairwise populations.
| Locus | Number of alleles | Private alleles in this study (%) | ||||
|---|---|---|---|---|---|---|
| This study | Steven | Location | (%) | |||
| CSA-121 | 4 | 5 | LPA—TRA | 0.0177 | ||
| CSA-094 | 6 | 13 | LPA—LAG | 0.0153 | ||
| CSA-001 | 24 | 42 | LPA—ITA | 0.0185 | ||
| CSC-004 | 31 | 49 | TRA—ITA | 0.0210 | ||
| CSC-035 | 33 | 64 | TRA—LAG | 0.0157 | ||
| CSC-007 | 42 | 42 | ITA—LAG | 0.0132 | ||
| CSC-073 | 43 | 48 | ||||
| TOTAL | 183 | 263 | Average | 0.0167 | ||
LPA = Lagoa dos Patos; TRA = Tramandaí; LAG = Laguna; ITA = Itajaí.
Genetic diversity of seven nuclear loci of blue crabs populations sampled at the Western South Atlantic.
| Lagoa dos Patos | Tramandaí | Itajaí | Laguna | |
|---|---|---|---|---|
| 57 | 33 | 47 | 67 | |
| 4 | 3 | 4 | 4 | |
| 0.2069 | 0.2647 | 0.2037 | 0.1940 | |
| 0.2223 | 0.2412 | 0.3035 | 0.2524 | |
| 0.0091 | 1.0000 | 0.0065 | 0.1133 | |
| -0.0247 | -0.0646 | 0.2878 | 0.1040 | |
| 54 | 33 | 52 | 65 | |
| 20 | 11 | 17 | 22 | |
| 0.6379 | 0.4706 | 0.6111 | 0.6269 | |
| 0.6806 | 0.5095 | 0.5877 | 0.6540 | |
| 0.0196 | 0.2662 | 0.5659 | 0.1452 | |
| 0.0244 | 0.0153 | -0.0020 | 0.0097 | |
| 58 | 34 | 53 | 66 | |
| 26 | 12 | 21 | 28 | |
| 0.8276 | 0.7941 | 0.9444 | 0.7705 | |
| 0.8024 | 0.7204 | 0.7663 | 0.7463 | |
| 0.0840 | 0.0000* | 0.0000* | 0.0182 | |
| -0.0089 | 0.0186 | -0.0363 | 0.0590 | |
| 56 | 24 | 40 | 67 | |
| 13 | 7 | 9 | 16 | |
| 0.2413 | 0.1470 | 0.3333 | 0.3582 | |
| 0.5683 | 0.3679 | 0.5051 | 0.6041 | |
| 0.0000* | 0.0000* | 0.0000* | 0.0000* | |
| 0.5038 | 0.6771 | 0.03572 | 0.3936 | |
| 54 | 32 | 43 | 66 | |
| 14 | 10 | 10 | 19 | |
| 0.8103 | 0.6470 | 0.6111 | 0.7611 | |
| 0.7270 | 0.7021 | 0.5869 | 0.7415 | |
| 0.0021 | 0.0931 | 0.0000* | 0.0757 | |
| 0.0886 | 0.1737 | 0.1258 | 0.0963 | |
| 55 | 28 | 40 | 67 | |
| 26 | 23 | 26 | 33 | |
| 0.8103 | 0.7647 | 0.7037 | 0.9253 | |
| 0.8843 | 0.7764 | 0.7034 | 0.9558 | |
| 0.0000* | 0.0516 | 0.0040 | 0.0073 | |
| 0.0835 | 0.0301 | 0.0398 | 0.0476 | |
| 57 | 25 | 46 | 67 | |
| 5 | 3 | 4 | 5 | |
| 0.2586 | 0.0882 | 0.2777 | 0.3880 | |
| 0.2383 | 0.1374 | 0.3370 | 0.3488 | |
| 1.0000 | 0.2086 | 0.0706 | 0.9191 | |
| -0.0293 | 0.2420 | 0.2671 | -0.0313 |
N number of genotypes, h number of haplotypes, Ho observed heterozygosity, H expected heterozygosity, HWE Hardy-Weinberg equilibrium and F inbreeding coefficient. Asterisks indicate significant HWE values after a standard Bonferroni correction (*α < 0.001).
Pairwise F values (below diagonal) and p-values (above diagonal) between locations, considering seasons (α < 0.001).
| LPA W | LPA S | TRA W | ITA W | ITA S | LAG W | LAG S | |
|---|---|---|---|---|---|---|---|
| - | 0.4540 | 0.0173 | 0.0262 | 0.1634 | 0.1353 | 0.1336 | |
| -0.00094 | - | 0.1745 | 0.2023 | 0.6583 | 0.4003 | 0.7399 | |
| 0.01939 | 0.00648 | - | 0.7355 | 0.0883 | 0.0131 | 0.0517 | |
| 0.01869 | 0.00501 | -0.00788 | - | 0.0927 | 0.0433 | 0.1581 | |
| 0.00330 | -0.00507 | 0.00702 | 0.00551 | - | 0.2830 | 0.4298 | |
| 0.00720 | 0.00020 | 0.02376 | 0.01832 | 0.00085 | - | 0.7924 | |
| 0.00598 | -0.00436 | 0.01178 | 0.00532 | -0.00119 | -0.00489 | - |
Pairwise F values (below diagonal) and p-values (above diagonal) between locations.
| LPA | TRA | ITA | LAG | |
|---|---|---|---|---|
| - | 0.03605 | 0.14414 | 0.18919 | |
| 0.01245 | - | 0.27027 | 0.00000 | |
| 0.00323 | -0.00023 | - | 0.03604 | |
| 0.00373 | 0.01755 | 0.00408 | - |
*Asterisks indicate significant values (*α < 0.001).
Fig 2STRUCTURE assignment probabilities for blue crabs in South Brazil.
K = 2 clusters. Each vertical bar represents one individual, and vertical black lines separate the sampled populations: LPA = Lagoa dos Patos; TRA = Tramandaí; ITA = Itajaí; LAG = Laguna.
Fig 3Directional migration rates between blue crab populations, given as effective number of migrants.
LPA = Lagoa dos Patos; TRA = Tramandaí; ITA = Itajaí; LAG = Laguna.