Literature DB >> 17955293

Genetic variation and population structure of hair crab (Erimacrus isenbeckii ) in Japan inferred from mitochondrial DNA sequence analysis.

Noriko Azuma1, Yasushi Kunihiro, Jun Sasaki, Eiji Mihara, Yukio Mihara, Tomoaki Yasunaga, Deuk-Hee Jin, Syuiti Abe.   

Abstract

Genetic variation and population structure of hair crab (Erimacrus isenbeckii) were examined using nucleotide sequence analysis of 580 base pairs (bp) in the 3' portion of the mitochondrial cytochrome c oxidase subunit I gene (COI) of 20 samples collected from 16 locales in Japan (the Hokkaido and Honshu Islands) and one in Korea. A total of 27 haplotypes was defined by 23 variable nucleotide sites in the examined COI region. Pairwise population F (ST) estimates and neighbor-joining tree inferred distinct genetic differentiation between the representative samples from the Pacific Ocean off the Eastern Hokkaido Island and the Sea of Japan, while others were intermediate between these two groups. AMOVA also showed a weak but significant differentiation among these three groups. The present results suggest a moderate population structure of hair crab, probably influenced by high gene flow between regional populations due to sea current dependent larval dispersal of this species.

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Year:  2007        PMID: 17955293     DOI: 10.1007/s10126-007-9033-1

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  16 in total

1.  Molecular phylogeny and biogeography of the marine shrimp Penaeus.

Authors:  J D Baldwin; A L Bass; B W Bowen; W H Clark
Journal:  Mol Phylogenet Evol       Date:  1998-12       Impact factor: 4.286

2.  Genetic structure of Japanese scallop population in Hokkaido, analyzed by mitochondrial haplotype distribution.

Authors:  Koji Nagashima; Maremi Sato; Kenji Kawamata; Aoi Nakamura; Tomoki Ohta
Journal:  Mar Biotechnol (NY)       Date:  2005-03-15       Impact factor: 3.619

3.  Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data.

Authors:  L Excoffier; P E Smouse; J M Quattro
Journal:  Genetics       Date:  1992-06       Impact factor: 4.562

4.  AN EXACT TEST FOR POPULATION DIFFERENTIATION.

Authors:  Michel Raymond; François Rousset
Journal:  Evolution       Date:  1995-12       Impact factor: 3.694

5.  Genetic population structure and contemporary dispersal patterns of a recent European invader, the Chinese mitten crab, Eriocheir sinensis.

Authors:  Leif-Matthias Herborg; David Weetman; Cock van Oosterhout; Bernd Hänfling
Journal:  Mol Ecol       Date:  2007-01       Impact factor: 6.185

6.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

7.  Phylogeography of a high-dispersal New Zealand sea-star: does upwelling block gene-flow?

Authors:  J M Waters; M S Roy
Journal:  Mol Ecol       Date:  2004-09       Impact factor: 6.185

8.  Phylogeography of the pantropical sea urchin Tripneustes: contrasting patterns of population structure between oceans.

Authors:  H A Lessios; J Kane; D R Robertson
Journal:  Evolution       Date:  2003-09       Impact factor: 3.694

9.  Molecular systematics of the Asian mitten crabs, genus Eriocheir (Crustacea: Brachyura).

Authors:  Boping Tang; Kaiya Zhou; Daxiang Song; Guang Yang; Aiyun Dai
Journal:  Mol Phylogenet Evol       Date:  2003-11       Impact factor: 4.286

10.  A global invader at home: population structure of the green crab, Carcinus maenas, in Europe.

Authors:  Joe Roman; Stephen R Palumbi
Journal:  Mol Ecol       Date:  2004-10       Impact factor: 6.185

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  2 in total

1.  Unique mitogenomic features in the scleractinian family pocilloporidae (scleractinia: astrocoeniina).

Authors:  Chienhsun Chen; Chih-Yung Chiou; Chang-Feng Dai; Chaolun Allen Chen
Journal:  Mar Biotechnol (NY)       Date:  2008-05-14       Impact factor: 3.727

2.  High Connectivity among Blue Crab (Callinectes sapidus) Populations in the Western South Atlantic.

Authors:  Ana Luzia Figueiredo Lacerda; Ralf Kersanach; Maria Cristina Silva Cortinhas; Pedro Fernandes Sanmartin Prata; Luiz Felipe Cestari Dumont; Maíra Carneiro Proietti; Rodrigo Maggioni; Fernando D'Incao
Journal:  PLoS One       Date:  2016-04-11       Impact factor: 3.240

  2 in total

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