Literature DB >> 27064268

The interaction with gold suppresses fiber-like conformations of the amyloid β (16-22) peptide.

Luca Bellucci1, Albert Ardèvol2, Michele Parrinello2, Helmut Lutz3, Hao Lu3, Tobias Weidner3, Stefano Corni4.   

Abstract

Inorganic surfaces and nanoparticles can accelerate or inhibit the fibrillation process of proteins and peptides, including the biomedically relevant amyloid β peptide. However, the microscopic mechanisms that determine such an effect are still poorly understood. By means of large-scale, state-of-the-art enhanced sampling molecular dynamics simulations, here we identify an interaction mechanism between the segments 16-22 of the amyloid β peptide, known to be fibrillogenic by itself, and the Au(111) surface in water that leads to the suppression of fiber-like conformations from the peptide conformational ensemble. Moreover, thanks to advanced simulation analysis techniques, we characterize the conformational selection vs. induced fit nature of the gold effect. Our results disclose an inhibition mechanism that is rooted in the details of the microscopic peptide-surface interaction rather than in general phenomena such as peptide sequestration from the solution.

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Year:  2016        PMID: 27064268     DOI: 10.1039/c6nr01539e

Source DB:  PubMed          Journal:  Nanoscale        ISSN: 2040-3364            Impact factor:   7.790


  10 in total

1.  Ubiquitin immobilized on mesoporous MCM41 silica surfaces - Analysis by solid-state NMR with biophysical and surface characterization.

Authors:  Nurit Adiram-Filiba; Avital Schremer; Eli Ohaion; Merav Nadav-Tsubery; Tammi Lublin-Tennenbaum; Keren Keinan-Adamsky; Gil Goobes
Journal:  Biointerphases       Date:  2017-05-31       Impact factor: 2.456

Review 2.  Self-assembling peptide-based building blocks in medical applications.

Authors:  Handan Acar; Samanvaya Srivastava; Eun Ji Chung; Mathew R Schnorenberg; John C Barrett; James L LaBelle; Matthew Tirrell
Journal:  Adv Drug Deliv Rev       Date:  2016-08-14       Impact factor: 15.470

3.  Effect of the air-water interface on the conformation of amyloid beta.

Authors:  Suman Samantray; David L Cheung
Journal:  Biointerphases       Date:  2020-12-17       Impact factor: 2.456

4.  Developments and Ongoing Challenges for Analysis of Surface-Bound Proteins.

Authors:  Tobias Weidner; David G Castner
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

5.  Predicting the orientation of protein G B1 on hydrophobic surfaces using Monte Carlo simulations.

Authors:  Elisa T Harrison; Tobias Weidner; David G Castner; Gianluca Interlandi
Journal:  Biointerphases       Date:  2016-12-06       Impact factor: 2.456

Review 6.  Molecular Modeling for Nanomaterial-Biology Interactions: Opportunities, Challenges, and Perspectives.

Authors:  Tommaso Casalini; Vittorio Limongelli; Mélanie Schmutz; Claudia Som; Olivier Jordan; Peter Wick; Gerrit Borchard; Giuseppe Perale
Journal:  Front Bioeng Biotechnol       Date:  2019-10-17

7.  Fibril Structure Demonstrates the Role of Iodine Labelling on a Pentapeptide Self-Assembly.

Authors:  Alessandro Marchetti; Andrea Pizzi; Greta Bergamaschi; Nicola Demitri; Ulrike Stollberg; Ulf Diederichsen; Claudia Pigliacelli; Pierangelo Metrangolo
Journal:  Chemistry       Date:  2022-02-17       Impact factor: 5.020

8.  Acidic pH Promotes Refolding and Macroscopic Assembly of Amyloid β (16-22) Peptides at the Air-Water Interface.

Authors:  Hao Lu; Luca Bellucci; Shumei Sun; Daizong Qi; Marta Rosa; Rüdiger Berger; Stefano Corni; Mischa Bonn
Journal:  J Phys Chem Lett       Date:  2022-07-15       Impact factor: 6.888

9.  In Situ Generation of Chiroptically-Active Gold-Peptide Superstructures Promoted by Iodination.

Authors:  Claudia Pigliacelli; Kavitha Buntara Sanjeeva; Andrea Pizzi; Alessandro Gori; Francesca Baldelli Bombelli; Pierangelo Metrangolo
Journal:  ACS Nano       Date:  2019-01-16       Impact factor: 15.881

10.  Computational screening of nanoparticles coupling to Aβ40 peptides and fibrils.

Authors:  Soumyo Sen; Lela Vuković; Petr Král
Journal:  Sci Rep       Date:  2019-11-28       Impact factor: 4.379

  10 in total

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