Literature DB >> 27061804

Using fatty acids to fingerprint biofilm communities: a means to quickly and accurately assess stream quality.

Jared L DeForest1, Samuel A Drerup2, Morgan L Vis2.   

Abstract

The assessment of lotic ecosystem quality plays an essential role to help determine the extent of environmental stress and the effectiveness of restoration activities. Methods that incorporate biological properties are considered ideal because they provide direct assessment of the end goal of a vigorous biological community. Our primary objective was to use biofilm lipids to develop an accurate biomonitoring tool that requires little expertise and time to facilitate assessment. A model was created of fatty acid biomarkers most associated with predetermined stream quality classification, exceptional warm water habitat (EWH), warm water habitat (WWH), and limited resource (LR-AMD), and validated along a gradient of known stream qualities. The fatty acid fingerprint of the biofilm community was statistically different (P = 0.03) and was generally unique to recognized stream quality. One striking difference was essential fatty acids (DHA, EPA, and ARA) were absent from LR-AMD and only recovered from WWH and EWH, 45 % more in EWH than WWH. Independently testing the model along a stream quality gradient, this model correctly categorized six of the seven sites, with no match due to low sample biomass. These results provide compelling evidence that biofilm fatty acid analysis can be a sensitive, accurate, and cost-effective biomonitoring tool. We conceive of future studies expanding this research to more in-depth studies of remediation efforts, determining the applicable geographic area for the method and the addition of multiple stressors with the possibility of distinguishing among stressors.

Entities:  

Keywords:  Aquatic ecosystems; Benthic biofilm; Biomonitoring; Essential fatty acids; Fatty acids; Reclamation

Mesh:

Substances:

Year:  2016        PMID: 27061804     DOI: 10.1007/s10661-016-5290-7

Source DB:  PubMed          Journal:  Environ Monit Assess        ISSN: 0167-6369            Impact factor:   2.513


  10 in total

Review 1.  Eutrophication of freshwater and coastal marine ecosystems: a global problem.

Authors:  Val H Smith
Journal:  Environ Sci Pollut Res Int       Date:  2003       Impact factor: 4.223

2.  A rapid method of total lipid extraction and purification.

Authors:  E G BLIGH; W J DYER
Journal:  Can J Biochem Physiol       Date:  1959-08

3.  Distribution of aquatic macrophytes in contrasting river systems: a critique of compositional-based assessment of water quality.

Authors:  Benoît O L Demars; Anthony C Edwards
Journal:  Sci Total Environ       Date:  2008-11-01       Impact factor: 7.963

4.  Direct and indirect influence of parental bedrock on streambed microbial community structure in forested streams.

Authors:  Jennifer J Mosher; Robert H Findlay
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

Review 5.  Ecological assessments with algae: a review and synthesis.

Authors:  Jan Stevenson
Journal:  J Phycol       Date:  2014-05-06       Impact factor: 2.923

6.  Comparison of microbial community assays for the assessment of stream biofilm ecology.

Authors:  A J A Vinten; R R E Artz; N Thomas; J M Potts; L Avery; S J Langan; H Watson; Y Cook; C Taylor; C Abel; E Reid; B K Singh
Journal:  J Microbiol Methods       Date:  2011-03-21       Impact factor: 2.363

7.  The use of phospholipid fatty acid analysis to measure impact of acid rock drainage on microbial communities in sediments.

Authors:  E A Ben-David; P J Holden; D J M Stone; B D Harch; L J Foster
Journal:  Microb Ecol       Date:  2004-08-24       Impact factor: 4.552

8.  Use of leaf litter breakdown and macroinvertebrates to evaluate gradient of recovery in an acid mine impacted stream remediated with an active alkaline doser.

Authors:  Kelly S Johnson; Peter C Thompson; Lori Gromen; Jen Bowman
Journal:  Environ Monit Assess       Date:  2014-02-28       Impact factor: 2.513

9.  Biome-level biogeography of streambed microbiota.

Authors:  Robert H Findlay; Christine Yeates; Meredith A J Hullar; David A Stahl; Louis A Kaplan
Journal:  Appl Environ Microbiol       Date:  2008-03-31       Impact factor: 4.792

10.  Fatty acid composition at the base of aquatic food webs is influenced by habitat type and watershed land use.

Authors:  James H Larson; William B Richardson; Brent C Knights; Lynn A Bartsch; Michelle R Bartsch; John C Nelson; Jason A Veldboom; Jon M Vallazza
Journal:  PLoS One       Date:  2013-08-05       Impact factor: 3.240

  10 in total
  2 in total

1.  Do grazers respond to or control food quality? Cross-scale analysis of algivorous fish in littoral Lake Tanganyika.

Authors:  Renalda N Munubi; Peter B McIntyre; Yvonne Vadeboncoeur
Journal:  Oecologia       Date:  2018-08-12       Impact factor: 3.225

2.  Seasonality of total fatty acid profiles in acid mine drainage impaired streams.

Authors:  Samuel A Drerup; Morgan L Vis
Journal:  Environ Monit Assess       Date:  2018-07-14       Impact factor: 2.513

  2 in total

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