Literature DB >> 27048323

The importance of GC-MS date processing and analysis strategies suitable for plant and environmental metabolomics : with references to Changes in the abundance of sugars and sugar-like compounds in tall fescue (Festuca arundinacea) due to growth in naphthalene-treated sand.

Kai P Law1,2, Ting-Li Han3,4.   

Abstract

Entities:  

Year:  2016        PMID： 27048323     DOI： 10.1007/s11356-016-6546-z

Source DB:  PubMed          Journal:  Environ Sci Pollut Res Int        ISSN： 0944-1344            Impact factor:   4.223


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  10 in total

1.  metaMS: an open-source pipeline for GC-MS-based untargeted metabolomics.

Authors:  Ron Wehrens; Georg Weingart; Fulvio Mattivi
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2014-03-12       Impact factor: 3.205

2.  Systematic identification of conserved metabolites in GC/MS data for metabolomics and biomarker discovery.

Authors:  Mark P Styczynski; Joel F Moxley; Lily V Tong; Jason L Walther; Kyle L Jensen; Gregory N Stephanopoulos
Journal:  Anal Chem       Date:  2007-02-01       Impact factor: 6.986

3.  MetaboliteDetector: comprehensive analysis tool for targeted and nontargeted GC/MS based metabolome analysis.

Authors:  Karsten Hiller; Jasper Hangebrauk; Christian Jäger; Jana Spura; Kerstin Schreiber; Dietmar Schomburg
Journal:  Anal Chem       Date:  2009-05-01       Impact factor: 6.986

4.  Metab: an R package for high-throughput analysis of metabolomics data generated by GC-MS.

Authors:  Raphael Aggio; Silas Granato Villas-Bôas; Katya Ruggiero
Journal:  Bioinformatics       Date:  2011-06-22       Impact factor: 6.937

5.  A software complement to AMDIS for processing GC-MS metabolomic data.

Authors:  Volker Behrends; Gregory D Tredwell; Jacob G Bundy
Journal:  Anal Biochem       Date:  2011-04-23       Impact factor: 3.365

Review 6.  Stable isotope coded derivatizing reagents as internal standards in metabolite profiling.

Authors:  Per Bruheim; Hans Fredrik Nyvold Kvitvang; Silas G Villas-Boas
Journal:  J Chromatogr A       Date:  2013-04-09       Impact factor: 4.759

7.  Evaluation of automated sample preparation, retention time locked gas chromatography-mass spectrometry and data analysis methods for the metabolomic study of Arabidopsis species.

Authors:  Qun Gu; Frank David; Frédéric Lynen; Klaus Rumpel; Jasper Dugardeyn; Dominique Van Der Straeten; Guowang Xu; Pat Sandra
Journal:  J Chromatogr A       Date:  2011-01-18       Impact factor: 4.759

8.  Metabolite profiling for plant functional genomics.

Authors:  O Fiehn; J Kopka; P Dörmann; T Altmann; R N Trethewey; L Willmitzer
Journal:  Nat Biotechnol       Date:  2000-11       Impact factor: 54.908

9.  GC-MS based targeted metabolic profiling identifies changes in the wheat metabolome following deoxynivalenol treatment.

Authors:  Benedikt Warth; Alexandra Parich; Christoph Bueschl; Denise Schoefbeck; Nora Katharina Nicole Neumann; Bernhard Kluger; Katharina Schuster; Rudolf Krska; Gerhard Adam; Marc Lemmens; Rainer Schuhmacher
Journal:  Metabolomics       Date:  2014-09-27       Impact factor: 4.290

Review 10.  Spectral deconvolution for gas chromatography mass spectrometry-based metabolomics: current status and future perspectives.

Authors:  Xiuxia Du; Steven H Zeisel
Journal:  Comput Struct Biotechnol J       Date:  2013-06-28       Impact factor: 7.271
  10 in total
  1 in total

1.  Analytical challenges of untargeted GC-MS-based metabolomics and the critical issues in selecting the data processing strategy.

Authors:  Ting-Li Han; Yang Yang; Hua Zhang; Kai P Law
Journal:  F1000Res       Date:  2017-06-22
  1 in total

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