Literature DB >> 27047303

Taking a look at the calibration of a CCD detector with a fiber-optic taper.

R W Alkire1, F J Rotella1, N E C Duke1, Zbyszek Otwinowski2, Dominika Borek2.   

Abstract

At the Structural Biology Center beamline 19BM, located at the Advanced Photon Source, the operational characteristics of the equipment are routinely checked to ensure they are in proper working order. After performing a partial flat-field calibration for the ADSC Quantum 210r CCD detector, it was confirmed that the detector operates within specifications. However, as a secondary check it was decided to scan a single reflection across one-half of a detector module to validate the accuracy of the calibration. The intensities from this single reflection varied by more than 30% from the module center to the corner of the module. Redistribution of light within bent fibers of the fiber-optic taper was identified to be a source of this variation. The degree to which the diffraction intensities are corrected to account for characteristics of the fiber-optic tapers depends primarily upon the experimental strategy of data collection, approximations made by the data processing software during scaling, and crystal symmetry.

Entities:  

Keywords:  CCD detectors; anomalous signal; data scaling; fiber-optic tapers; flat-field calibration

Year:  2016        PMID: 27047303      PMCID: PMC4815871          DOI: 10.1107/S1600576716000431

Source DB:  PubMed          Journal:  J Appl Crystallogr        ISSN: 0021-8898            Impact factor:   3.304


  17 in total

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Authors:  Zbyszek Otwinowski; Dominika Borek; Wladyslaw Majewski; Wladek Minor
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2.  Measurement errors and their consequences in protein crystallography.

Authors:  Dominika Borek; Wladek Minor; Zbyszek Otwinowski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-10-23

3.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01

4.  Quantifying instrument errors in macromolecular X-ray data sets.

Authors:  Kay Diederichs
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-05-15

5.  Design of a vacuum-compatible high-precision monochromatic beam-position monitor for use with synchrotron radiation from 5 to 25 keV.

Authors:  R W Alkire; G Rosenbaum; G Evans
Journal:  J Synchrotron Radiat       Date:  2000-03-01       Impact factor: 2.616

6.  Charge-coupled device-based area detectors.

Authors:  E M Westbrook; I Naday
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  Identification of patterns in diffraction intensities affected by radiation exposure.

Authors:  Dominika Borek; Zbigniew Dauter; Zbyszek Otwinowski
Journal:  J Synchrotron Radiat       Date:  2012-12-06       Impact factor: 2.616

8.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

9.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

10.  The point-spread function of fiber-coupled area detectors.

Authors:  James M Holton; Chris Nielsen; Kenneth A Frankel
Journal:  J Synchrotron Radiat       Date:  2012-09-05       Impact factor: 2.616

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  1 in total

1.  Real-space analysis of radiation-induced specific changes with independent component analysis.

Authors:  Dominika Borek; Raquel Bromberg; Johan Hattne; Zbyszek Otwinowski
Journal:  J Synchrotron Radiat       Date:  2018-02-22       Impact factor: 2.616

  1 in total

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