Literature DB >> 14573959

Measurement errors and their consequences in protein crystallography.

Dominika Borek1, Wladek Minor, Zbyszek Otwinowski.   

Abstract

This article analyzes the relative impact of various types of measurement uncertainties on different stages of structure determination. The treatment of errors is an important part of the experimental process and becomes critical when data quality is barely sufficient to solve and/or answer detailed questions about the structure. The sources and types of experimental errors are described and methods of minimizing their impact are discussed. Practical calculations of sigma estimates in DENZO and SCALEPACK are presented.

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Year:  2003        PMID： 14573959     DOI： 10.1107/s0907444903020924

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN： 0907-4449


  37 in total

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Authors:  Y Zhang; Sergey M Vorobiev; Bruce G Gibson; Binghua Hao; Gurjit S Sidhu; Vishnu S Mishra; Elena G Yarmola; Michael R Bubb; Steven C Almo; Frederick S Southwick
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3.  A llama-derived gelsolin single-domain antibody blocks gelsolin-G-actin interaction.

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Journal:  Cell Mol Life Sci       Date:  2010-02-07       Impact factor: 9.261

4.  Microcrystallography using single-bounce monocapillary optics.

Authors:  R E Gillilan; M J Cook; S W Cornaby; D H Bilderback
Journal:  J Synchrotron Radiat       Date:  2010-01-19       Impact factor: 2.616

5.  Structure-based alteration of substrate specificity and catalytic activity of sulfite oxidase from sulfite oxidation to nitrate reduction.

Authors:  James A Qiu; Heather L Wilson; K V Rajagopalan
Journal:  Biochemistry       Date:  2012-01-30       Impact factor: 3.162

6.  Trypanosomatid Deoxyhypusine Synthase Activity Is Dependent on Shared Active-Site Complementation between Pseudoenzyme Paralogs.

Authors:  Gustavo A Afanador; Diana R Tomchick; Margaret A Phillips
Journal:  Structure       Date:  2018-09-06       Impact factor: 5.006

7.  Expression, purification, crystallization and preliminary crystallographic analysis of the proliferation-associated protein Ebp1.

Authors:  Eva Kowalinski; Gert Bange; Klemens Wild; Irmgard Sinning
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-08-25

8.  Protein AMPylation by an Evolutionarily Conserved Pseudokinase.

Authors:  Anju Sreelatha; Samantha S Yee; Victor A Lopez; Brenden C Park; Lisa N Kinch; Sylwia Pilch; Kelly A Servage; Junmei Zhang; Jenny Jiou; Monika Karasiewicz-Urbańska; Małgorzata Łobocka; Nick V Grishin; Kim Orth; Roza Kucharczyk; Krzysztof Pawłowski; Diana R Tomchick; Vincent S Tagliabracci
Journal:  Cell       Date:  2018-09-27       Impact factor: 41.582

9.  Crystal structures of Mycobacterium tuberculosis S-adenosyl-L-homocysteine hydrolase in ternary complex with substrate and inhibitors.

Authors:  Manchi C M Reddy; Gokulan Kuppan; Nishant D Shetty; Joshua L Owen; Thomas R Ioerger; James C Sacchettini
Journal:  Protein Sci       Date:  2008-09-24       Impact factor: 6.725

10.  Diffraction data analysis in the presence of radiation damage.

Authors:  Dominika Borek; Marcin Cymborowski; Mischa Machius; Wladek Minor; Zbyszek Otwinowski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24
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