Literature DB >> 27044320

The role of RNA editing by ADAR1 in prevention of innate immune sensing of self-RNA.

Jacki E Heraud-Farlow1, Carl R Walkley2,3.   

Abstract

The innate immune system is the first line of the cellular defence against invading pathogens. A critical component of this defence is the capacity to discriminate foreign RNA molecules, which are distinct from most cellular RNAs in structure and/or modifications. However, a series of rare autoimmune/autoinflammatory diseases in humans highlight the propensity for the innate immune sensing system to be activated by endogenous cellular double-stranded RNAs (dsRNAs), underscoring the fine line between distinguishing self from non-self. The RNA editing enzyme ADAR1 has recently emerged as a key regulator that prevents innate immune pathway activation, principally the cytosolic dsRNA sensor MDA5, from inducing interferon in response to double-stranded RNA structures within endogenous RNAs. Adenosine-to-Inosine RNA editing by ADAR1 is proposed to destabilise duplexes formed from inverted repetitive elements within RNAs, which appear to prevent MDA5 from sensing these RNA as virus-like in the cytoplasm. Aberrant activation of these pathways has catastrophic effects at both a cellular and organismal level, contributing to one of the causes of the conditions collectively known as the type I interferonopathies.

Entities:  

Keywords:  ADAR1; Innate immune sensing; Interferonopathy; MDA5; RNA editing; dsRNA

Mesh:

Substances:

Year:  2016        PMID: 27044320     DOI: 10.1007/s00109-016-1416-1

Source DB:  PubMed          Journal:  J Mol Med (Berl)        ISSN: 0946-2716            Impact factor:   4.599


  44 in total

1.  Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2.

Authors:  M Higuchi; S Maas; F N Single; J Hartner; A Rozov; N Burnashev; D Feldmeyer; R Sprengel; P H Seeburg
Journal:  Nature       Date:  2000-07-06       Impact factor: 49.962

Review 2.  Innate immune sensing and signaling of cytosolic nucleic acids.

Authors:  Jiaxi Wu; Zhijian J Chen
Journal:  Annu Rev Immunol       Date:  2014       Impact factor: 28.527

3.  Structural basis for dsRNA recognition, filament formation, and antiviral signal activation by MDA5.

Authors:  Bin Wu; Alys Peisley; Claire Richards; Hui Yao; Xiaohui Zeng; Cecilie Lin; Feixia Chu; Thomas Walz; Sun Hur
Journal:  Cell       Date:  2012-12-27       Impact factor: 41.582

Review 4.  Protein kinase PKR and RNA adenosine deaminase ADAR1: new roles for old players as modulators of the interferon response.

Authors:  Christian K Pfaller; Zhiqun Li; Cyril X George; Charles E Samuel
Journal:  Curr Opin Immunol       Date:  2011-09-15       Impact factor: 7.486

Review 5.  MDA5-filament, dynamics and disease.

Authors:  Yoandris del Toro Duany; Bin Wu; Sun Hur
Journal:  Curr Opin Virol       Date:  2015-02-09       Impact factor: 7.090

6.  Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus.

Authors:  Martin Schlee; Andreas Roth; Veit Hornung; Cristina Amparo Hagmann; Vera Wimmenauer; Winfried Barchet; Christoph Coch; Markus Janke; Aleksandra Mihailovic; Greg Wardle; Stefan Juranek; Hiroki Kato; Taro Kawai; Hendrik Poeck; Katherine A Fitzgerald; Osamu Takeuchi; Shizuo Akira; Thomas Tuschl; Eicke Latz; Janos Ludwig; Gunther Hartmann
Journal:  Immunity       Date:  2009-07-02       Impact factor: 31.745

7.  Characterization of human disease phenotypes associated with mutations in TREX1, RNASEH2A, RNASEH2B, RNASEH2C, SAMHD1, ADAR, and IFIH1.

Authors:  Yanick J Crow; Diana S Chase; Johanna Lowenstein Schmidt; Marcin Szynkiewicz; Gabriella M A Forte; Hannah L Gornall; Anthony Oojageer; Beverley Anderson; Amy Pizzino; Guy Helman; Mohamed S Abdel-Hamid; Ghada M Abdel-Salam; Sam Ackroyd; Alec Aeby; Guillermo Agosta; Catherine Albin; Stavit Allon-Shalev; Montse Arellano; Giada Ariaudo; Vijay Aswani; Riyana Babul-Hirji; Eileen M Baildam; Nadia Bahi-Buisson; Kathryn M Bailey; Christine Barnerias; Magalie Barth; Roberta Battini; Michael W Beresford; Geneviève Bernard; Marika Bianchi; Thierry Billette de Villemeur; Edward M Blair; Miriam Bloom; Alberto B Burlina; Maria Luisa Carpanelli; Daniel R Carvalho; Manuel Castro-Gago; Anna Cavallini; Cristina Cereda; Kate E Chandler; David A Chitayat; Abigail E Collins; Concepcion Sierra Corcoles; Nuno J V Cordeiro; Giovanni Crichiutti; Lyvia Dabydeen; Russell C Dale; Stefano D'Arrigo; Christian G E L De Goede; Corinne De Laet; Liesbeth M H De Waele; Ines Denzler; Isabelle Desguerre; Koenraad Devriendt; Maja Di Rocco; Michael C Fahey; Elisa Fazzi; Colin D Ferrie; António Figueiredo; Blanca Gener; Cyril Goizet; Nirmala R Gowrinathan; Kalpana Gowrishankar; Donncha Hanrahan; Bertrand Isidor; Bülent Kara; Nasaim Khan; Mary D King; Edwin P Kirk; Ram Kumar; Lieven Lagae; Pierre Landrieu; Heinz Lauffer; Vincent Laugel; Roberta La Piana; Ming J Lim; Jean-Pierre S-M Lin; Tarja Linnankivi; Mark T Mackay; Daphna R Marom; Charles Marques Lourenço; Shane A McKee; Isabella Moroni; Jenny E V Morton; Marie-Laure Moutard; Kevin Murray; Rima Nabbout; Sheela Nampoothiri; Noemi Nunez-Enamorado; Patrick J Oades; Ivana Olivieri; John R Ostergaard; Belén Pérez-Dueñas; Julie S Prendiville; Venkateswaran Ramesh; Magnhild Rasmussen; Luc Régal; Federica Ricci; Marlène Rio; Diana Rodriguez; Agathe Roubertie; Elisabetta Salvatici; Karin A Segers; Gyanranjan P Sinha; Doriette Soler; Ronen Spiegel; Tommy I Stödberg; Rachel Straussberg; Kathryn J Swoboda; Mohnish Suri; Uta Tacke; Tiong Y Tan; Johann te Water Naude; Keng Wee Teik; Maya Mary Thomas; Marianne Till; Davide Tonduti; Enza Maria Valente; Rudy Noel Van Coster; Marjo S van der Knaap; Grace Vassallo; Raymon Vijzelaar; Julie Vogt; Geoffrey B Wallace; Evangeline Wassmer; Hannah J Webb; William P Whitehouse; Robyn N Whitney; Maha S Zaki; Sameer M Zuberi; John H Livingston; Flore Rozenberg; Pierre Lebon; Adeline Vanderver; Simona Orcesi; Gillian I Rice
Journal:  Am J Med Genet A       Date:  2015-01-16       Impact factor: 2.802

8.  Adenosine deaminases that act on RNA induce reproducible changes in abundance and sequence of embryonic miRNAs.

Authors:  Cornelia Vesely; Stefanie Tauber; Fritz J Sedlazeck; Arndt von Haeseler; Michael F Jantsch
Journal:  Genome Res       Date:  2012-02-06       Impact factor: 9.043

9.  The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.

Authors:  Niamh M Mannion; Sam M Greenwood; Robert Young; Sarah Cox; James Brindle; David Read; Christoffer Nellåker; Cornelia Vesely; Chris P Ponting; Paul J McLaughlin; Michael F Jantsch; Julia Dorin; Ian R Adams; A D J Scadden; Marie Ohman; Liam P Keegan; Mary A O'Connell
Journal:  Cell Rep       Date:  2014-11-13       Impact factor: 9.423

10.  A genome-wide map of hyper-edited RNA reveals numerous new sites.

Authors:  Hagit T Porath; Shai Carmi; Erez Y Levanon
Journal:  Nat Commun       Date:  2014-08-27       Impact factor: 14.919

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  12 in total

1.  Nucleic acid-mediated autoinflammation and autoimmunity-type I interferonopathies.

Authors:  Min Ae Lee-Kirsch; Claudia Günther; Axel Roers
Journal:  J Mol Med (Berl)       Date:  2016-10       Impact factor: 4.599

2.  RNA editing underlies genetic risk of common inflammatory diseases.

Authors:  Stephen B Montgomery; Jin Billy Li; Qin Li; Michael J Gloudemans; Jonathan M Geisinger; Boming Fan; François Aguet; Tao Sun; Gokul Ramaswami; Yang I Li; Jin-Biao Ma; Jonathan K Pritchard
Journal:  Nature       Date:  2022-08-03       Impact factor: 69.504

3.  RNA editing by ADAR1 leads to context-dependent transcriptome-wide changes in RNA secondary structure.

Authors:  Oz Solomon; Ayelet Di Segni; Karen Cesarkas; Hagit T Porath; Victoria Marcu-Malina; Orel Mizrahi; Noam Stern-Ginossar; Nitzan Kol; Sarit Farage-Barhom; Efrat Glick-Saar; Yaniv Lerenthal; Erez Y Levanon; Ninette Amariglio; Ron Unger; Itamar Goldstein; Eran Eyal; Gidi Rechavi
Journal:  Nat Commun       Date:  2017-11-13       Impact factor: 14.919

4.  Protein recoding by ADAR1-mediated RNA editing is not essential for normal development and homeostasis.

Authors:  Jacki E Heraud-Farlow; Alistair M Chalk; Sandra E Linder; Qin Li; Scott Taylor; Joshua M White; Lokman Pang; Brian J Liddicoat; Ankita Gupte; Jin Billy Li; Carl R Walkley
Journal:  Genome Biol       Date:  2017-09-05       Impact factor: 13.583

5.  ADAR1 and PACT contribute to efficient translation of transcripts containing HIV-1 trans-activating response (TAR) element.

Authors:  Evelyn Chukwurah; Indhira Handy; Rekha C Patel
Journal:  Biochem J       Date:  2017-03-23       Impact factor: 3.857

Review 6.  RIG-I-Like Receptor Signaling in Singleton-Merten Syndrome.

Authors:  Changming Lu; Mary MacDougall
Journal:  Front Genet       Date:  2017-09-12       Impact factor: 4.599

7.  The A946T variant of the RNA sensor IFIH1 mediates an interferon program that limits viral infection but increases the risk for autoimmunity.

Authors:  Jacquelyn A Gorman; Christian Hundhausen; John S Errett; Amy E Stone; Eric J Allenspach; Yan Ge; Tanvi Arkatkar; Courtnee Clough; Xuezhi Dai; Socheath Khim; Kathleen Pestal; Denny Liggitt; Karen Cerosaletti; Daniel B Stetson; Richard G James; Mohamed Oukka; Patrick Concannon; Michael Gale; Jane H Buckner; David J Rawlings
Journal:  Nat Immunol       Date:  2017-05-29       Impact factor: 25.606

8.  Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells.

Authors:  Hugh S Gannon; Tao Zou; Michael K Kiessling; Galen F Gao; Diana Cai; Peter S Choi; Alexandru P Ivan; Ilana Buchumenski; Ashton C Berger; Jonathan T Goldstein; Andrew D Cherniack; Francisca Vazquez; Aviad Tsherniak; Erez Y Levanon; William C Hahn; Matthew Meyerson
Journal:  Nat Commun       Date:  2018-12-21       Impact factor: 14.919

9.  Widespread cis-regulation of RNA editing in a large mammal.

Authors:  Thomas J Lopdell; Victoria Hawkins; Christine Couldrey; Kathryn Tiplady; Stephen R Davis; Bevin L Harris; Russell G Snell; Mathew D Littlejohn
Journal:  RNA       Date:  2018-12-10       Impact factor: 4.942

10.  Lung expression of genes putatively involved in SARS-CoV-2 infection is modulated in cis by germline variants.

Authors:  Chiara E Cotroneo; Nunzia Mangano; Tommaso A Dragani; Francesca Colombo
Journal:  Eur J Hum Genet       Date:  2021-03-01       Impact factor: 4.246

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