| Literature DB >> 27042269 |
Mei-Cen Zhou1, Ping Yu2, Qi Sun1, Yu-Xiu Li1.
Abstract
AIMS/Entities:
Keywords: Glucose and lipid metabolism; Peroxisome proliferator‐activated receptor signaling pathway; Uncoupling protein 2
Mesh:
Substances:
Year: 2015 PMID: 27042269 PMCID: PMC4773664 DOI: 10.1111/jdi.12402
Source DB: PubMed Journal: J Diabetes Investig ISSN: 2040-1116 Impact factor: 4.232
Oligonucleotide sequences for messenger ribonucleic acid quantitative reverse transcription polymerase chain reaction
| Gene symbol | Forward primer (5′–3′) | Reverse primer (5′–3′) |
|---|---|---|
|
| AGACCACTCGCATTCCTTTGAC | GCAGGTTCTACTTTGATCGCACT |
|
| AGACCAGGGCTGAGTGGATGAT | CAGACGTGGGACCAAAGAGACTAT |
|
| GTGGAAAAGGTAGACGAGCTAAAGA | TACAGAGGGAGGAGGAGCAGAG |
|
| TCATCTCTTCATTGACTCCCTGCTG | TGCTTCTCTTGGCTCTGACCTTGT |
|
| GAGTTGCTCTTGGGGTGGTG | GGCCTTCTTGCAGGTGTTTATC |
|
| GTCAAAGAGAAGGGCGGAAAAC | CACCAGAGTGTATCGCAAGAAGG |
|
| CAGCCTTTGTCCTCGCTACCTC | GGCATGGTGTTGGAAATGTCGG |
|
| GGCAAAAGGCAAGGAGAAGCA | GGGAAAGAGGTGAGAGAAGAGCG |
|
| ACCTCCTGTTCTTGCTGTCTCCC | AACGGGCTGTCTGCTGTGAATC |
| β‐actin | TGTTACCAACTG GGACGACA | GGGGTGTTGAAGGTCT CAAA |
Acsl3, acyl‐CoA synthetase long‐chain family member 3; Dbi, diazepam binding inhibitor; Fads2, fatty acid desaturase 2; Lpl, lipoprotein lipase; Me1, malic enzyme 1; PPARα, peroxisome proliferator‐activated receptor alpha; PPARδ, peroxisome proliferator‐activated receptor delta; PPARγ, peroxisome proliferator‐activated receptor gamma; Scd1, stearoyl‐CoA desaturase 1.
Comparison of uncoupling protein 2−/− group and uncoupling protein 2+/+ group at baseline
| UCP2+/+ ( | UCP2−/− ( | |
|---|---|---|
| FBG (mmol/L) | 5.05 ± 0.53 | 4.54 ± 1.24 |
| Fasting insulin (ng/mL) | 0.27 ± 0.09 | 0.29 ± 0.22 |
There were no significant differences between the groups. FBG, fasting blood glucose; UCP2, uncoupling protein 2.
Figure 1Fasting blood glucose was measured every 4 weeks and was found to significantly differ in the uncoupling protein 2 (UCP2)−/− group on the high‐fat diet compared with the UCP2+/+ group on the high‐fat diet. There was no significant difference in fasting blood glucose between the UCP2−/− group on the high‐fat diet vs the normal chow diet group. **P < 0.01.
Comparison of uncoupling protein 2−/− groups and uncoupling protein 2+/+ groups after 16 weeks
| UCP2+/+ on high fat diet ( | UCP2−/− on high fat diet ( | UCP2+/+ on normal diet ( | UCP2−/− on normal diet ( | |
|---|---|---|---|---|
| Weight gain | 8.55 ± 2.38 | 8.57 ± 3.44 | 6.23 ± 2.06 | 7.02 ± 1.93 |
| Liver/bodyweight (100×) | 6.42 ± 0.61 | 6.31 ± 0.46 | 6.11 ± 0.59 | 6.18 ± 0.65 |
| FBG (mmol/L) | 9.27 ± 1.25 | 6.57 ± 2.17 | 5.09 ± 1.01 | 5.93 ± 1.04 |
| Fasting insulin (ng/mL) | 0.24 ± 0.10 | 0.41 ± 0.19 | 0.27 ± 0.09 | 0.26 ± 0.08 |
| AIRg | 0.09 ± 0.01 | 0.11 ± 0.02 | 0.14 ± 0.03 | 0.13 ± 0.01 |
| Si | 0.32 ± 0.11 | 0.45 ± 0.07 | 0.41 ± 0.08 | 0.44 ± 0.09 |
| Disposition index | 0.03 ± 0.01 | 0.05 ± 0.01 | 0.05 ± 0.02 | 0.06 ± 0.02 |
*P < 0.05, **P < 0.01. AIRg, acute insulin response to glucose; FBG, fasting blood glucose; Si, sensitivity index; UCP2, uncoupling protein 2.
Figure 2Two‐hour intraperitoneal glucose tolerance test intraperitoneal glucose tolerance test (IPGTT): plasma glucose profiles in response to (a) an exogenous glucose load and (b) area under the curve (AUC), (c) serum insulin profiles in response to an exogenous glucose load and (d) AUC; (e) insulin tolerance test (ITT): plasma glucose profiles in response to exogenously administered insulin and (f) AUC. *P < 0.05, **P < 0.01, ## P < 0.01. UCP2, uncoupling protein 2.
Figure 3In the 16th week, the following serum lipid concentrations were measured among the groups: (a) serum total cholesterol; (b) serum triglycerides; and (c) serum free fatty acid. ***P < 0.001, **P < 0.01, *P < 0.05. UCP2, uncoupling protein 2.
Figure 4(a–e) Hematoxylin–eosin staining staining at the 16 weeks. (a) Uncoupling protein 2 (UCP2)+/+ group in normal diet (black arrow, steatosis; magnification: ×10). (b) UCP2+/+ group on the high‐fat diet (magnification: ×20). (c) UCP2−/− group in normal diet (magnification: ×10). (e) UCP2−/− group on the high‐fat diet (magnification: ×20). (c, f) Oil red O staining at 16 weeks (blue arrow, red lipid droplet; magnification: ×10). (c) UCP2+/+ group on the high‐fat diet (magnification: ×40). (f) UCP2−/− group on the high‐fat diet (magnification: ×40). (g) Histopathological evaluation of steatosis in the UCP2+/+ group and UCP2−/− group on the high‐fat diet. *P < 0.05.
Figure 5Gene array data analysis comparing the gene expression of the uncoupling protein 2 (UCP2)−/− groups with that of the UCP2+/+ groups. (a) Heat map diagram: the differential expression of hepatic messenger ribonucleic acids between the UCP2−/− group on high‐fat diet and the UCP2−/− group on the normal diet. The tree was based on the log2 transformation of the normalized probe signal intensities using hierarchical clustering. The hierarchical clustering was based on the differentially expressed messenger ribonucleic acids. (b) Heat map diagram: the differential expression of hepatic messenger ribonucleic acids between the UCP2+/+ group on the high‐fat diet and the UCP2+/+ group on the normal diet. (c) Volcano plot: this graph shows the log2 of the fold change in the expression of each gene between the UCP2−/− groups and the UCP2+/+ groups, and the P‐values obtained from the t‐test. The blue plots show that the threshold for the fold change in gene expression was >1.5, and the P‐value was <0.05. The red plots show the upregulated genes in the peroxisome proliferator‐activated receptor signaling pathway.
Gene ontology groups of differentially upregulated genes in uncoupling protein 2−/− group
| GO ID | GO name | Enrichment |
| FDR |
|---|---|---|---|---|
| GO:0055114 | Oxidation‐reduction process | 10.87 | 8.48 × 10−12 | 3.25 × 10−09 |
| GO:0008152 | Metabolic process | 8.72 | 1.28 × 10−11 | 3.25 × 10−09 |
| GO:0006633 | Fatty acid biosynthetic process | 50.13 | 4.49 × 10−10 | 7.61 × 10−08 |
| GO:0006629 | Lipid metabolic process | 12.91 | 4.73 × 10−09 | 6.01 × 10−07 |
| GO:0006810 | Transport | 5.04 | 7.48 × 10−08 | 7.60 × 10−06 |
| GO:0006631 | Fatty acid metabolic process | 20.71 | 2.07 × 10−06 | 0.000175 |
| GO:0043123 | Positive regulation of I‐kappa B kinase/NF‐kappa B cascade | 22.85 | 1.18 × 10−05 | 0.000858 |
| GO:0000038 | Very‐long‐chain fatty acid metabolic process | 89.97 | 1.94 × 10−05 | 0.001231 |
| GO:0001676 | Long‐chain fatty acid metabolic process | 68.55 | 4.57 × 10−05 | 0.002185 |
| GO:0006082 | Organic acid metabolic process | 319.89 | 5.16 × 10−05 | 0.002185 |
Top 10 gene ontology (GO) categories, P < 0.01. FDR, false discovery rate.
Kyoto Encyclopedia of Genes and Genomes pathways of differentially upregulated genes in uncoupling protein 2−/− group
| KEGG ID | Pathway name | Gene symbol | Enrichment |
| FDR |
|---|---|---|---|---|---|
| 00982 | Drug metabolism‐cytochrome P450 |
| 54.41 | 6.92 × 10−16 | 6.71 × 10−14 |
| 05204 | Chemical carcinogenesis |
| 45.45 | 2.21 × 10−12 | 7.89 × 10−11 |
| 00980 | Metabolism of xenobiotics by cytochrome P450 |
| 44.98 | 2.44 × 10−12 | 7.89 × 10−11 |
| 03320 | PPAR signaling pathway |
| 47.39 | 3.19 × 10−11 | 7.73 × 10−10 |
| 01100 | Metabolic pathways |
| 6.57 | 4.04 × 10−09 | 7.85 × 10−08 |
| 01040 | Biosynthesis of unsaturated fatty acids |
| 95.97 | 7.43 × 10−09 | 1.07 × 10−07 |
| 00480 | Glutathione metabolism |
| 52.35 | 7.71 × 10−09 | 1.07 × 10−07 |
| 00983 | Drug metabolism – other enzymes |
| 31.46 | 3.42 × 10−05 | 0.00041 |
| 00830 | Retinol metabolism |
| 22.06 | 0.000139 | 0.00142 |
| 04640 | Hematopoietic cell lineage |
| 21.81 | 0.000146 | 0.00142 |
| 00061 | Fatty acid biosynthesis |
| 159.94 | 0.000257 | 0.00227 |
| 04614 | Renin‐angiotensin system |
| 45.70 | 0.003526 | 0.02850 |
| 00062 | Fatty acid elongation |
| 39.99 | 0.004615 | 0.03221 |
| 00590 | Arachidonic acid metabolism |
| 14.69 | 0.004650 | 0.03221 |
| 04710 | Circadian rhythm |
| 30.96 | 0.007701 | 0.04980 |
| 04910 | Insulin signaling pathway |
| 10.21 | 0.013101 | 0.07479 |
| 05166 | HTLV‐I infection |
| 6.62 | 0.013108 | 0.07479 |
| 00620 | Pyruvate metabolism |
| 22.85 | 0.014048 | 0.07570 |
| 02010 | ABC transporters |
| 20.86 | 0.016795 | 0.08574 |
| 00591 | Linoleic acid metabolism |
| 19.19 | 0.019771 | 0.09588 |
| 05152 | Tuberculosis |
| 8.04 | 0.025432 | 0.11747 |
| 04920 | Adipocytokine signaling pathway |
| 13.52 | 0.038981 | 0.17187 |
| 04260 | Cardiac muscle contraction |
| 12.15 | 0.047810 | 0.20164 |
Fold change >1.5, P < 0.05. FDR, false discovery rate; HTLV‐I, human T‐cell leukemia virus 1; KEGG, Kyoto Encyclopedia of Genes and Genomes; PPAR, peroxisome proliferator‐activated receptor.
Fold change of differential gene expression in liver as measured by gene array and quantitative reverse transcription polymerase chain reaction at the 16th week
| Gene symbol | Fold change (gene array) |
| Fold change (RT–qPCR) |
| |
|---|---|---|---|---|---|
| UCP2−/− groups vs UCP2+/+ groups |
| 1.91 | 0.0053975 | 2.5 ± 0.11 | 0.001 |
|
| 1.6 | 0.0003178 | 1.89 ± 0.03 | 0.006 | |
|
| 1.71 | 0.0137553 | 2.0 ± 0.27 | 0.002 | |
|
| 1.62 | 0.0051632 | 1.94 ± 0.20 | 0.0001 | |
|
| 1.75 | 0.0000479 | 2.0 ± 0.18 | 0.018 | |
|
| 1.88 | 0.0035999 | 2.1 ± 0.21 | 0.035 | |
|
| 1.54 | 0.006165 | 1.68 ± 0.18 | 0.012 | |
|
| 0.96 | 0.453672 | 0.98 ± 0.05 | 0.33 | |
|
| 1.01 | 0.903472 | 1.03 ± 0.09 | 0.86 |
The quantitative reverse transcription polymerase chain reaction (RT–qPCR) results were consistent with those of the gene array. UCP2, uncoupling protein 2.