| Literature DB >> 27039700 |
Anisha Keshavan1, Friedemann Paul2, Mona K Beyer3, Alyssa H Zhu4, Nico Papinutto5, Russell T Shinohara6, William Stern7, Michael Amann8, Rohit Bakshi9, Antje Bischof10, Alessandro Carriero11, Manuel Comabella12, Jason C Crane13, Sandra D'Alfonso14, Philippe Demaerel15, Benedicte Dubois16, Massimo Filippi17, Vinzenz Fleischer18, Bertrand Fontaine19, Laura Gaetano20, An Goris21, Christiane Graetz22, Adriane Gröger23, Sergiu Groppa24, David A Hafler25, Hanne F Harbo26, Bernhard Hemmer27, Kesshi Jordan28, Ludwig Kappos29, Gina Kirkish30, Sara Llufriu31, Stefano Magon32, Filippo Martinelli-Boneschi33, Jacob L McCauley34, Xavier Montalban35, Mark Mühlau36, Daniel Pelletier37, Pradip M Pattany38, Margaret Pericak-Vance39, Isabelle Cournu-Rebeix40, Maria A Rocca41, Alex Rovira42, Regina Schlaeger43, Albert Saiz44, Till Sprenger45, Alessandro Stecco46, Bernard M J Uitdehaag47, Pablo Villoslada48, Mike P Wattjes49, Howard Weiner50, Jens Wuerfel51, Claus Zimmer52, Frauke Zipp53, Stephen L Hauser54, Jorge R Oksenberg55, Roland G Henry56.
Abstract
A concern for researchers planning multisite studies is that scanner and T1-weighted sequence-related biases on regional volumes could overshadow true effects, especially for studies with a heterogeneous set of scanners and sequences. Current approaches attempt to harmonize data by standardizing hardware, pulse sequences, and protocols, or by calibrating across sites using phantom-based corrections to ensure the same raw image intensities. We propose to avoid harmonization and phantom-based correction entirely. We hypothesized that the bias of estimated regional volumes is scaled between sites due to the contrast and gradient distortion differences between scanners and sequences. Given this assumption, we provide a new statistical framework and derive a power equation to define inclusion criteria for a set of sites based on the variability of their scaling factors. We estimated the scaling factors of 20 scanners with heterogeneous hardware and sequence parameters by scanning a single set of 12 subjects at sites across the United States and Europe. Regional volumes and their scaling factors were estimated for each site using Freesurfer's segmentation algorithm and ordinary least squares, respectively. The scaling factors were validated by comparing the theoretical and simulated power curves, performing a leave-one-out calibration of regional volumes, and evaluating the absolute agreement of all regional volumes between sites before and after calibration. Using our derived power equation, we were able to define the conditions under which harmonization is not necessary to achieve 80% power. This approach can inform choice of processing pipelines and outcome metrics for multisite studies based on scaling factor variability across sites, enabling collaboration between clinical and research institutions.Entities:
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Year: 2016 PMID: 27039700 PMCID: PMC5656257 DOI: 10.1016/j.neuroimage.2016.03.051
Source DB: PubMed Journal: Neuroimage ISSN: 1053-8119 Impact factor: 6.556