Literature DB >> 27035523

Measurement of Heme Ruffling Changes in MhuD Using UV-vis Spectroscopy.

Amanda B Graves1, Max T Graves1, Matthew D Liptak1.   

Abstract

For decades it has been known that an out-of-plane ruffling distortion of heme perturbs its UV-vis absorption (Abs) spectrum, but whether increased ruffling induces a red or blue shift of the Soret band has remained a topic of debate. This debate has been resolved by the spectroscopic and computational characterization of Mycobacterium tuberculosis MhuD presented here, an enzyme that converts heme, oxygen, and reducing equivalents to nonheme iron and mycobilin. W66F and W66A MhuD have been characterized using (1)H nuclear magnetic resonance, Abs, and magnetic circular dichroism spectroscopies, and the data have been used to develop an experimentally validated theoretical model of ruffled, ferric heme. The PBE density functional theory (DFT) model that has been developed accurately reproduces the observed spectral changes from wild type enzyme, and the underlying quantum mechanical origins of these ruffling-induced changes were revealed by analyzing the PBE DFT description of the electronic structure. Small amounts of heme ruffling have no influence on the energy of the Q-band and blue-shift the Soret band due to symmetry-allowed mixing of the Fe 3dxy and porphyrin a2u orbitals. Larger amounts of ruffling red-shift both the Q and Soret bands due to disruption of π-bonding within the porphyrin ring.

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Year:  2016        PMID: 27035523     DOI: 10.1021/acs.jpcb.6b01497

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  13 in total

1.  Naturally Occurring A51V Variant of Human Cytochrome c Destabilizes the Native State and Enhances Peroxidase Activity.

Authors:  Haotian Lei; Bruce E Bowler
Journal:  J Phys Chem B       Date:  2019-10-14       Impact factor: 2.991

2.  Formation and Reactivity of New Isoporphyrins: Implications for Understanding the Tyr-His Cross-Link Cofactor Biogenesis in Cytochrome c Oxidase.

Authors:  Melanie A Ehudin; Laura Senft; Alicja Franke; Ivana Ivanović-Burmazović; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2019-06-26       Impact factor: 15.419

3.  Catalytic iron-carbene intermediate revealed in a cytochrome c carbene transferase.

Authors:  Russell D Lewis; Marc Garcia-Borràs; Matthew J Chalkley; Andrew R Buller; K N Houk; S B Jennifer Kan; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-26       Impact factor: 11.205

4.  Spectroscopic Evidence for Electronic Control of Heme Hydroxylation by IsdG.

Authors:  Matthew A Conger; Amanda R Cornetta; Matthew D Liptak
Journal:  Inorg Chem       Date:  2019-11-06       Impact factor: 5.165

Review 5.  Biological and Bioinspired Inorganic N-N Bond-Forming Reactions.

Authors:  Christina Ferousi; Sean H Majer; Ida M DiMucci; Kyle M Lancaster
Journal:  Chem Rev       Date:  2020-02-28       Impact factor: 60.622

6.  Iron Acquisition in Mycobacterium tuberculosis.

Authors:  Alex Chao; Paul J Sieminski; Cedric P Owens; Celia W Goulding
Journal:  Chem Rev       Date:  2018-11-26       Impact factor: 60.622

7.  Ruffling is essential for Staphylococcus aureus IsdG-catalyzed degradation of heme to staphylobilin.

Authors:  Ariel E Schuelke-Sanchez; Amanda R Cornetta; Taylor A J Kocian; Matthew A Conger; Matthew D Liptak
Journal:  J Inorg Biochem       Date:  2022-02-25       Impact factor: 4.336

8.  The Eponymous Cofactors in Cytochrome P460s from Ammonia-Oxidizing Bacteria Are Iron Porphyrinoids Whose Macrocycles Are Dibasic.

Authors:  Meghan A Smith; Kyle M Lancaster
Journal:  Biochemistry       Date:  2017-12-06       Impact factor: 3.162

9.  Influence of heme c attachment on heme conformation and potential.

Authors:  Jesse G Kleingardner; Benjamin D Levin; Giorgio Zoppellaro; K Kristoffer Andersson; Sean J Elliott; Kara L Bren
Journal:  J Biol Inorg Chem       Date:  2018-08-24       Impact factor: 3.358

10.  A Dynamic Substrate is Required for MhuD-Catalyzed Degradation of Heme to Mycobilin.

Authors:  Biswash Thakuri; Bruce D O'Rourke; Amanda B Graves; Matthew D Liptak
Journal:  Biochemistry       Date:  2021-03-17       Impact factor: 3.162

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