Literature DB >> 35247855

Ruffling is essential for Staphylococcus aureus IsdG-catalyzed degradation of heme to staphylobilin.

Ariel E Schuelke-Sanchez1, Amanda R Cornetta1, Taylor A J Kocian1, Matthew A Conger1, Matthew D Liptak2.   

Abstract

Non-canonical heme oxygenases are enzymes that degrade heme to non-biliverdin products within bacterial heme iron acquisition pathways. These enzymes all contain a conserved second-sphere Trp residue that is essential for enzymatic turnover. Here, UV/Vis absorption (Abs) and circular dichroism (CD) spectroscopies were employed to show that the W67F variant of IsdG perturbs the heme substrate conformation. In general, a dynamic equilibrium between "planar" and "ruffled" substrate conformations exists within non-canonical heme oxygenases, and that the second-sphere Trp favors population of the "ruffled" substrate conformation. 1H nuclear magnetic resonance and magnetic CD spectroscopies were used to characterize the electronic structures of IsdG and IsdI variants with different substrate conformational distributions. These data revealed that the "ruffled" substrate conformation promotes partial porphyrin-to‑iron electron transfer, which makes the meso carbons of the porphyrin ring susceptible to radical attack. Finally, UV/Vis Abs spectroscopy was utilized to quantify the enzymatic rates, and electrospray ionization mass spectrometry was used to identify the product distributions, for variants of IsdG with altered substrate conformational distributions. In general, the rate of heme oxygenation by non-canonical heme oxygenases depends upon the population of the "ruffled" substrate conformation. Also, the production of staphylobilin or mycobilin by these enzymes is correlated with the population of the "ruffled" substrate conformation, since variants that favor population of the "planar" substrate conformation yield significant amounts of biliverdin. These data can be understood within the framework of a concerted rearrangement mechanism for the monooxygenation of heme to meso-hydroxyheme by non-canonical heme oxygenases.
Copyright © 2022 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Biliverdin; Enzyme kinetics; Heme oxygenase; Magnetic circular dichroism; Nuclear magnetic resonance; Staphylobilin

Mesh:

Substances:

Year:  2022        PMID: 35247855      PMCID: PMC8930504          DOI: 10.1016/j.jinorgbio.2022.111775

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.336


  48 in total

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8.  Ruffling of metalloporphyrins bound to IsdG and IsdI, two heme-degrading enzymes in Staphylococcus aureus.

Authors:  Woo Cheol Lee; Michelle L Reniere; Eric P Skaar; Michael E P Murphy
Journal:  J Biol Chem       Date:  2008-08-19       Impact factor: 5.157

9.  Time-resolved Studies of IsdG Protein Identify Molecular Signposts along the Non-canonical Heme Oxygenase Pathway.

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10.  A Dynamic Substrate is Required for MhuD-Catalyzed Degradation of Heme to Mycobilin.

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Journal:  Biochemistry       Date:  2021-03-17       Impact factor: 3.162

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