Literature DB >> 27031184

Two-stage sample-to-answer system based on nucleic acid amplification approach for detection of malaria parasites.

Qing Liu1, Jeonghun Nam2, Sangho Kim3, Chwee Teck Lim4, Mi Kyoung Park1, Yong Shin5.   

Abstract

Rapid, early, and accurate diagnosis of malaria is essential for effective disease management and surveillance, and can reduce morbidity and mortality associated with the disease. Although significant advances have been achieved for the diagnosis of malaria, these technologies are still far from ideal, being time consuming, complex and poorly sensitive as well as requiring separate assays for sample processing and detection. Therefore, the development of a fast and sensitive method that can integrate sample processing with detection of malarial infection is desirable. Here, we report a two-stage sample-to-answer system based on nucleic acid amplification approach for detection of malaria parasites. It combines the Dimethyl adipimidate (DMA)/Thin film Sample processing (DTS) technique as a first stage and the Mach-Zehnder Interferometer-Isothermal solid-phase DNA Amplification (MZI-IDA) sensing technique as a second stage. The system can extract DNA from malarial parasites using DTS technique in a closed system, not only reducing sample loss and contamination, but also facilitating the multiplexed malarial DNA detection using the fast and accurate MZI-IDA technique. Here, we demonstrated that this system can deliver results within 60min (including sample processing, amplification and detection) with high sensitivity (<1 parasite μL(-1)) in a label-free and real-time manner. The developed system would be of great potential for better diagnosis of malaria in low-resource settings.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Isothermal DNA amplification; Mach-Zehnder interferometer; Malaria parasites; Sample processing; Tropical disease

Mesh:

Substances:

Year:  2016        PMID: 27031184     DOI: 10.1016/j.bios.2016.03.050

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  5 in total

1.  Lab-on-a-Film disposable for genotyping multidrug-resistant Mycobacterium tuberculosis from sputum extracts.

Authors:  Alexander C Kukhtin; Thomas Sebastian; Julia Golova; Alex Perov; Christopher Knickerbocker; Yvonne Linger; Arial Bueno; Peter Qu; Michael Villanueva; Rebecca C Holmberg; Darrell P Chandler; Christopher G Cooney
Journal:  Lab Chip       Date:  2019-03-27       Impact factor: 6.799

2.  Sample-to-Answer Microfluidic Nucleic Acid Testing (NAT) on Lab-on-a-Disc for Malaria Detection at Point of Need.

Authors:  Gihoon Choi; Weihua Guan
Journal:  Methods Mol Biol       Date:  2022

3.  An Ultracompact Real-Time Fluorescence Loop-Mediated Isothermal Amplification (LAMP) Analyzer.

Authors:  Gihoon Choi; Weihua Guan
Journal:  Methods Mol Biol       Date:  2022

4.  Rapid and accurate detection of KRAS mutations in colorectal cancers using the isothermal-based optical sensor for companion diagnostics.

Authors:  Choong Eun Jin; Seung-Seop Yeom; Bonhan Koo; Tae Yoon Lee; Jeong Hoon Lee; Yong Shin; Seok-Byung Lim
Journal:  Oncotarget       Date:  2017-08-08

5.  An isothermal, label-free, and rapid one-step RNA amplification/detection assay for diagnosis of respiratory viral infections.

Authors:  Bonhan Koo; Choong Eun Jin; Tae Yoon Lee; Jeong Hoon Lee; Mi Kyoung Park; Heungsup Sung; Se Yoon Park; Hyun Jung Lee; Sun Mi Kim; Ji Yeun Kim; Sung-Han Kim; Yong Shin
Journal:  Biosens Bioelectron       Date:  2016-11-23       Impact factor: 10.618

  5 in total

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