Literature DB >> 27023772

The gar is a fish... is a bird... is a mammal?

David M Parichy1.   

Abstract

Teleosts have emerged as important model organisms, yet their ancestrally duplicated genomes sometimes complicate developmental genetic analyses and comparisons to humans. A new genome sequence of spotted gar, a fish related to teleosts but lacking a duplicated genome, now helps to bridge human and teleost biology.

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Mesh:

Year:  2016        PMID: 27023772     DOI: 10.1038/ng.3532

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  14 in total

Review 1.  Preservation of duplicate genes by complementary, degenerative mutations.

Authors:  A Force; M Lynch; F B Pickett; A Amores; Y L Yan; J Postlethwait
Journal:  Genetics       Date:  1999-04       Impact factor: 4.562

2.  Ohnologs are overrepresented in pathogenic copy number mutations.

Authors:  Aoife McLysaght; Takashi Makino; Hannah M Grayton; Maria Tropeano; Kevin J Mitchell; Evangelos Vassos; David A Collier
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-24       Impact factor: 11.205

Review 3.  A new model army: Emerging fish models to study the genomics of vertebrate Evo-Devo.

Authors:  Ingo Braasch; Samuel M Peterson; Thomas Desvignes; Braedan M McCluskey; Peter Batzel; John H Postlethwait
Journal:  J Exp Zool B Mol Dev Evol       Date:  2014-08-11       Impact factor: 2.656

Review 4.  Whole-genome duplication in teleost fishes and its evolutionary consequences.

Authors:  Stella M K Glasauer; Stephan C F Neuhauss
Journal:  Mol Genet Genomics       Date:  2014-08-05       Impact factor: 3.291

5.  SCPP genes in the coelacanth: tissue mineralization genes shared by sarcopterygians.

Authors:  Kazuhiko Kawasaki; Chris T Amemiya
Journal:  J Exp Zool B Mol Dev Evol       Date:  2014-09       Impact factor: 2.656

6.  Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution.

Authors:  Jeramiah J Smith; Shigehiro Kuraku; Carson Holt; Tatjana Sauka-Spengler; Ning Jiang; Michael S Campbell; Mark D Yandell; Tereza Manousaki; Axel Meyer; Ona E Bloom; Jennifer R Morgan; Joseph D Buxbaum; Ravi Sachidanandam; Carrie Sims; Alexander S Garruss; Malcolm Cook; Robb Krumlauf; Leanne M Wiedemann; Stacia A Sower; Wayne A Decatur; Jeffrey A Hall; Chris T Amemiya; Nil R Saha; Katherine M Buckley; Jonathan P Rast; Sabyasachi Das; Masayuki Hirano; Nathanael McCurley; Peng Guo; Nicolas Rohner; Clifford J Tabin; Paul Piccinelli; Greg Elgar; Magali Ruffier; Bronwen L Aken; Stephen M J Searle; Matthieu Muffato; Miguel Pignatelli; Javier Herrero; Matthew Jones; C Titus Brown; Yu-Wen Chung-Davidson; Kaben G Nanlohy; Scot V Libants; Chu-Yin Yeh; David W McCauley; James A Langeland; Zeev Pancer; Bernd Fritzsch; Pieter J de Jong; Baoli Zhu; Lucinda L Fulton; Brenda Theising; Paul Flicek; Marianne E Bronner; Wesley C Warren; Sandra W Clifton; Richard K Wilson; Weiming Li
Journal:  Nat Genet       Date:  2013-02-24       Impact factor: 38.330

7.  The zebrafish reference genome sequence and its relationship to the human genome.

Authors:  Kerstin Howe; Matthew D Clark; Carlos F Torroja; James Torrance; Camille Berthelot; Matthieu Muffato; John E Collins; Sean Humphray; Karen McLaren; Lucy Matthews; Stuart McLaren; Ian Sealy; Mario Caccamo; Carol Churcher; Carol Scott; Jeffrey C Barrett; Romke Koch; Gerd-Jörg Rauch; Simon White; William Chow; Britt Kilian; Leonor T Quintais; José A Guerra-Assunção; Yi Zhou; Yong Gu; Jennifer Yen; Jan-Hinnerk Vogel; Tina Eyre; Seth Redmond; Ruby Banerjee; Jianxiang Chi; Beiyuan Fu; Elizabeth Langley; Sean F Maguire; Gavin K Laird; David Lloyd; Emma Kenyon; Sarah Donaldson; Harminder Sehra; Jeff Almeida-King; Jane Loveland; Stephen Trevanion; Matt Jones; Mike Quail; Dave Willey; Adrienne Hunt; John Burton; Sarah Sims; Kirsten McLay; Bob Plumb; Joy Davis; Chris Clee; Karen Oliver; Richard Clark; Clare Riddle; David Elliot; David Eliott; Glen Threadgold; Glenn Harden; Darren Ware; Sharmin Begum; Beverley Mortimore; Beverly Mortimer; Giselle Kerry; Paul Heath; Benjamin Phillimore; Alan Tracey; Nicole Corby; Matthew Dunn; Christopher Johnson; Jonathan Wood; Susan Clark; Sarah Pelan; Guy Griffiths; Michelle Smith; Rebecca Glithero; Philip Howden; Nicholas Barker; Christine Lloyd; Christopher Stevens; Joanna Harley; Karen Holt; Georgios Panagiotidis; Jamieson Lovell; Helen Beasley; Carl Henderson; Daria Gordon; Katherine Auger; Deborah Wright; Joanna Collins; Claire Raisen; Lauren Dyer; Kenric Leung; Lauren Robertson; Kirsty Ambridge; Daniel Leongamornlert; Sarah McGuire; Ruth Gilderthorp; Coline Griffiths; Deepa Manthravadi; Sarah Nichol; Gary Barker; Siobhan Whitehead; Michael Kay; Jacqueline Brown; Clare Murnane; Emma Gray; Matthew Humphries; Neil Sycamore; Darren Barker; David Saunders; Justene Wallis; Anne Babbage; Sian Hammond; Maryam Mashreghi-Mohammadi; Lucy Barr; Sancha Martin; Paul Wray; Andrew Ellington; Nicholas Matthews; Matthew Ellwood; Rebecca Woodmansey; Graham Clark; James D Cooper; James Cooper; Anthony Tromans; Darren Grafham; Carl Skuce; Richard Pandian; Robert Andrews; Elliot Harrison; Andrew Kimberley; Jane Garnett; Nigel Fosker; Rebekah Hall; Patrick Garner; Daniel Kelly; Christine Bird; Sophie Palmer; Ines Gehring; Andrea Berger; Christopher M Dooley; Zübeyde Ersan-Ürün; Cigdem Eser; Horst Geiger; Maria Geisler; Lena Karotki; Anette Kirn; Judith Konantz; Martina Konantz; Martina Oberländer; Silke Rudolph-Geiger; Mathias Teucke; Christa Lanz; Günter Raddatz; Kazutoyo Osoegawa; Baoli Zhu; Amanda Rapp; Sara Widaa; Cordelia Langford; Fengtang Yang; Stephan C Schuster; Nigel P Carter; Jennifer Harrow; Zemin Ning; Javier Herrero; Steve M J Searle; Anton Enright; Robert Geisler; Ronald H A Plasterk; Charles Lee; Monte Westerfield; Pieter J de Jong; Leonard I Zon; John H Postlethwait; Christiane Nüsslein-Volhard; Tim J P Hubbard; Hugues Roest Crollius; Jane Rogers; Derek L Stemple
Journal:  Nature       Date:  2013-04-17       Impact factor: 49.962

8.  New genomic and fossil data illuminate the origin of enamel.

Authors:  Qingming Qu; Tatjana Haitina; Min Zhu; Per Erik Ahlberg
Journal:  Nature       Date:  2015-09-23       Impact factor: 49.962

Review 9.  Genetics and early development of zebrafish.

Authors:  C B Kimmel
Journal:  Trends Genet       Date:  1989-08       Impact factor: 11.639

10.  Genome evolution and meiotic maps by massively parallel DNA sequencing: spotted gar, an outgroup for the teleost genome duplication.

Authors:  Angel Amores; Julian Catchen; Allyse Ferrara; Quenton Fontenot; John H Postlethwait
Journal:  Genetics       Date:  2011-08       Impact factor: 4.562

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  1 in total

1.  Evolutionary divergence of the vertebrate TNFAIP8 gene family: Applying the spotted gar orthology bridge to understand ohnolog loss in teleosts.

Authors:  Con Sullivan; Christopher R Lage; Jeffrey A Yoder; John H Postlethwait; Carol H Kim
Journal:  PLoS One       Date:  2017-06-28       Impact factor: 3.240

  1 in total

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