Literature DB >> 27022133

Minireview: Multiomic candidate biomarkers for clinical manifestations of sickle cell severity: Early steps to precision medicine.

Steven R Goodman1, Betty S Pace2, Kirk C Hansen3, Angelo D'alessandro3, Yang Xia4, Ovidiu Daescu5, Stephen J Glatt6.   

Abstract

In this review, we provide a description of those candidate biomarkers which have been demonstrated by multiple-omics approaches to vary in correlation with specific clinical manifestations of sickle cell severity. We believe that future clinical analyses of severity phenotype will require a multiomic analysis, or an omics stack approach, which includes integrated interactomics. It will also require the analysis of big data sets. These candidate biomarkers, whether they are individual or panels of functionally linked markers, will require future validation in large prospective and retrospective clinical studies. Once validated, the hope is that informative biomarkers will be used for the identification of individuals most likely to experience severe complications, and thereby be applied for the design of patient-specific therapeutic approaches and response to treatment. This would be the beginning of precision medicine for sickle cell disease.
© 2016 by the Society for Experimental Biology and Medicine.

Entities:  

Keywords:  Genomics; interactomics; metabolomics; precision medicine; proteomics; sickle cell disease

Mesh:

Substances:

Year:  2016        PMID: 27022133      PMCID: PMC4950385          DOI: 10.1177/1535370216640150

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  88 in total

1.  The Senegal DNA haplotype is associated with the amelioration of anemia in African-American sickle cell anemia patients.

Authors:  R L Nagel; S Erlingsson; M E Fabry; H Croizat; S M Susuka; H Lachman; M Sutton; C Driscoll; E Bouhassira; H H Billett
Journal:  Blood       Date:  1991-03-15       Impact factor: 22.113

Review 2.  The human red blood cell proteome and interactome.

Authors:  Steven R Goodman; Anastasia Kurdia; Larry Ammann; David Kakhniashvili; Ovidiu Daescu
Journal:  Exp Biol Med (Maywood)       Date:  2007-12

Review 3.  Blood-related proteomics.

Authors:  Giancarlo Liumbruno; Angelo D'Alessandro; Giuliano Grazzini; Lello Zolla
Journal:  J Proteomics       Date:  2009-06-27       Impact factor: 4.044

Review 4.  Deconstructing sickle cell disease: reappraisal of the role of hemolysis in the development of clinical subphenotypes.

Authors:  Gregory J Kato; Mark T Gladwin; Martin H Steinberg
Journal:  Blood Rev       Date:  2006-11-07       Impact factor: 8.250

5.  Beta-S gene cluster haplotypes modulate hematologic and hemorheologic expression in sickle cell anemia. Use in predicting clinical severity.

Authors:  D R Powars; H J Meiselman; T C Fisher; A Hiti; C Johnson
Journal:  Am J Pediatr Hematol Oncol       Date:  1994-02

Review 6.  The red blood cell proteome and interactome: an update.

Authors:  Angelo D'Alessandro; Pier Giorgio Righetti; Lello Zolla
Journal:  J Proteome Res       Date:  2010-01       Impact factor: 4.466

7.  Corepressor-dependent silencing of fetal hemoglobin expression by BCL11A.

Authors:  Jian Xu; Daniel E Bauer; Marc A Kerenyi; Thuy D Vo; Serena Hou; Yu-Jung Hsu; Huilan Yao; Jennifer J Trowbridge; Gail Mandel; Stuart H Orkin
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-01       Impact factor: 11.205

8.  The Keap1/Nrf2 pathway in health and disease: from the bench to the clinic.

Authors:  Maria A O'Connell; John D Hayes
Journal:  Biochem Soc Trans       Date:  2015-08-03       Impact factor: 5.407

9.  HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers.

Authors:  Ralph Stadhouders; Suleyman Aktuna; Supat Thongjuea; Ali Aghajanirefah; Farzin Pourfarzad; Wilfred van Ijcken; Boris Lenhard; Helen Rooks; Steve Best; Stephan Menzel; Frank Grosveld; Swee Lay Thein; Eric Soler
Journal:  J Clin Invest       Date:  2014-03-10       Impact factor: 14.808

10.  Role of innate immunity-triggered pathways in the pathogenesis of Sickle Cell Disease: a meta-analysis of gene expression studies.

Authors:  Bidossessi Wilfried Hounkpe; Maiara Marx Luz Fiusa; Marina Pereira Colella; Loredana Nilkenes Gomes da Costa; Rafaela de Oliveira Benatti; Sara T Olalla Saad; Fernando Ferreira Costa; Magnun Nueldo Nunes dos Santos; Erich Vinicius De Paula
Journal:  Sci Rep       Date:  2015-12-09       Impact factor: 4.379

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  6 in total

1.  Effects of red blood cell (RBC) transfusion on sickle cell disease recipient plasma and RBC metabolism.

Authors:  Rachel Culp-Hill; Amudan J Srinivasan; Sarah Gehrke; Reed Kamyszek; Andrea Ansari; Nirmish Shah; Ian Welsby; Angelo D'Alessandro
Journal:  Transfusion       Date:  2018-09-28       Impact factor: 3.157

2.  Sickle cell disease severity: an introduction.

Authors:  Betty S Pace; Steven R Goodman
Journal:  Exp Biol Med (Maywood)       Date:  2016-04

Review 3.  The Spectrinome: The Interactome of a Scaffold Protein Creating Nuclear and Cytoplasmic Connectivity and Function.

Authors:  Steven R Goodman; Daniel Johnson; Steven L Youngentob; David Kakhniashvili
Journal:  Exp Biol Med (Maywood)       Date:  2019-09-04

4.  Metabolic impact of red blood cell exchange with rejuvenated red blood cells in sickle cell patients.

Authors:  Sarah Gehrke; Nirmish Shah; Fabia Gamboni; Reed Kamyszek; Amudan J Srinivasan; Alan Gray; Matthew Landrigan; Ian Welsby; Angelo D'Alessandro
Journal:  Transfusion       Date:  2019-08-05       Impact factor: 3.157

5.  Biomarkers of clinical severity in treated and untreated sickle cell disease: a comparison by genotypes of a single center cohort and African Americans in the NHANES study.

Authors:  Franklin Njoku; Xu Zhang; Binal N Shah; Roberto F Machado; Jin Han; Santosh L Saraf; Victor R Gordeuk
Journal:  Br J Haematol       Date:  2021-07-15       Impact factor: 8.615

6.  Metabolomic Profiling of Plasma and Erythrocytes in Sickle Mice Points to Altered Nociceptive Pathways.

Authors:  Klétigui Casimir Dembélé; Thomas Mintz; Charlotte Veyrat-Durebex; Floris Chabrun; Stéphanie Chupin; Lydie Tessier; Gilles Simard; Daniel Henrion; Delphine Mirebeau-Prunier; Juan Manuel Chao de la Barca; Pierre-Louis Tharaux; Pascal Reynier
Journal:  Cells       Date:  2020-05-26       Impact factor: 6.600

  6 in total

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