Literature DB >> 27019438

Role of habitat and great oxidation event on the occurrence of three multisubunit inorganic carbon-uptake systems in cyanobacteria.

Vandana Tomar1, Gurpreet Kaur Sidhu, Panchsheela Nogia, Rajesh Mehrotra, Sandhya Mehrotra.   

Abstract

The oxygenase reaction catalyzed by RuBisCO became an issue only after the evolution of the oxygenic photosynthesis in cyanobacteria. Several strategies were developed by autotrophic organisms as an evolutionary response to increase oxygen levels to help RuBisCO maximize its net carboxylation rate. One of the crucial advancements in this context was the development of more efficient inorganic carbon transporters which could help in increasing the influx of inorganic carbon (Ci) at the site of CO₂ fixation.We conducted a survey to find out the genes coding for cyanobacterial Ci transporters in 40 cyanobacterial phyla with respect to transporters present in Gloeobacter violaceous PCC 7421, an early-diverging cyanobacterium. An attempt was also made to correlate the prevalence of the kind of transporter present in the species with its habitat. Basically, two types of cyanobacterial inorganic carbon transporters exist, i.e. bicarbonate transporters and CO₂-uptake systems. The transporters also show variation in context to their structure as some exist as single subunit proteins (BicA and SbtA), while others exist as multisubunit proteins (namely BCT1, NdhI₃ and NdhI₄). The phylogeny and dist ribution of the former have been extensively studied and the present analysis provides an insight into the latter ones. The in silico analysis of the genes under study revealed that their distribution was greatly influenced by the habitat and major environmental changes such as the great oxidation event (GOE) in the course of their evolution.

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Year:  2016        PMID: 27019438     DOI: 10.1007/s12041-015-0606-x

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  14 in total

1.  Type 2 NADH dehydrogenases in the cyanobacterium Synechocystis sp. strain PCC 6803 are involved in regulation rather than respiration.

Authors:  C A Howitt; P K Udall; W F Vermaas
Journal:  J Bacteriol       Date:  1999-07       Impact factor: 3.490

Review 2.  Phylogenetic characterization of novel transport protein families revealed by genome analyses.

Authors:  M H Saier; B H Eng; S Fard; J Garg; D A Haggerty; W J Hutchinson; D L Jack; E C Lai; H J Liu; D P Nusinew; A M Omar; S S Pao; I T Paulsen; J A Quan; M Sliwinski; T T Tseng; S Wachi; G B Young
Journal:  Biochim Biophys Acta       Date:  1999-02-25

3.  Enhancing C3 photosynthesis.

Authors:  Susanne von Caemmerer; John R Evans
Journal:  Plant Physiol       Date:  2010-10       Impact factor: 8.340

Review 4.  Insights into the evolution of CCMs from comparisons with other resource acquisition and assimilation processes.

Authors:  John A Raven; Mario Giordano; John Beardall
Journal:  Physiol Plant       Date:  2008-05       Impact factor: 4.500

5.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

6.  Strain characterization and classification of oxyphotobacteria in clone cultures on the basis of 16S rRNA sequences from the variable regions V6, V7, and V8.

Authors:  K Rudi; O M Skulberg; F Larsen; K S Jakobsen
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

7.  An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences.

Authors:  B Nelissen; Y Van de Peer; A Wilmotte; R De Wachter
Journal:  Mol Biol Evol       Date:  1995-11       Impact factor: 16.240

8.  Variations in photosystem I properties in the primordial cyanobacterium Gloeobacter violaceus PCC 7421.

Authors:  Mamoru Mimuro; Makio Yokono; Seiji Akimoto
Journal:  Photochem Photobiol       Date:  2009-09-21       Impact factor: 3.421

Review 9.  CO2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution.

Authors:  Murray R Badger; G Dean Price
Journal:  J Exp Bot       Date:  2003-02       Impact factor: 6.992

Review 10.  Manipulation of Rubisco: the amount, activity, function and regulation.

Authors:  M A J Parry; P J Andralojc; R A C Mitchell; P J Madgwick; A J Keys
Journal:  J Exp Bot       Date:  2003-05       Impact factor: 6.992

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  1 in total

Review 1.  Regulatory components of carbon concentrating mechanisms in aquatic unicellular photosynthetic organisms.

Authors:  Vandana Tomar; Gurpreet Kaur Sidhu; Panchsheela Nogia; Rajesh Mehrotra; Sandhya Mehrotra
Journal:  Plant Cell Rep       Date:  2017-08-05       Impact factor: 4.570

  1 in total

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