Literature DB >> 27014587

Genetic association between inflammatory genes (IL-1α, CD14, LGALS2, PSMA6) and risk of ischemic stroke: A meta-analysis.

Shubham Misra1, Pradeep Kumar1, Amit Kumar1, Ram Sagar1, Kamalesh Chakravarty1, Kameshwar Prasad1.   

Abstract

BACKGROUND: Sequence variations in genes involved in inflammatory system are known to contribute to the risk of cerebrovascular diseases (CVD) including stroke. Very few number of studies have been published in the context of the association between Interleukin-1α(IL-1α), CD14 cell surface glycoprotein (CD14), Galectin-2-encoding gene (LGALS2)and proteasome subunit type 6 (PSMA6) gene polymorphisms with susceptibility to ischemic stroke (IS).
OBJECTIVE: The present meta-analysis aimed to provide a comprehensive account of the association between IL-1α (-C889T and -C511T), CD14 (-C159T), LGALS2 (-C3279T) and PSMA6 (-C8G) gene polymorphisms and susceptibility to IS.
METHODS: A literature search for eligible genetic studies published before August 31, 2015 was conducted in the PubMed, Medline, EMBASE, OVID, and Google Scholar databases. Fixed or random effects models were used to estimate the Pooled Odds ratio (OR) and 95% confidence interval (CI) using RevMan 5.3 software.
RESULTS: Total 21 studies were included in our meta-analysis. No significant association was observed between IL-1α (-C889T) [OR = 1.18, 95% CI: 0.67-2.08, P = 0.58], IL-1α (-C511T) [OR = 0.95, 95% CI: 0.66-1.37, P = 0.77], LGALS2(-C2379T) [OR = 0.29, 95% CI: 0.02-4.26, P = 0.37] and CD14 (-C260T) [OR = 0.93, 95% CI: 0.77-1.11, P = 0. 42] gene polymorphisms and risk of IS. However, protective level of association was observed between PSMA6 (-C8G) gene polymorphism and susceptibility to IS under the recessive model [OR = 0.25, 95% CI: 0.08-0.72, P = 0.01].
CONCLUSION: Our meta-analysis shows that IL-1α (-C889T and -C511T), CD14 (-C159T), LGALS2 (-C3279T) and gene polymorphisms are not significantly associated with the risk of IS while PSMA6 (-C8G) gene polymorphism may play a protective role with the susceptibility of IS. Further prospective large epidemiological studies are needed to confirm these findings in different populations.

Entities:  

Keywords:  Cerebral infarction; Cytokines; Inflammatory gene; Ischemic stroke; Meta-analysis; Polymorphisms

Year:  2016        PMID: 27014587      PMCID: PMC4792905          DOI: 10.1016/j.mgene.2016.01.003

Source DB:  PubMed          Journal:  Meta Gene        ISSN: 2214-5400


Introduction

Stroke is among the leading causes of death in the world and a common cause of disability (Feigin et al., 2009, Bevan and Markus, 2011). Its incidence is rising with increasing life expectancy, although about 20% of strokes occur before the age of 65. Ischemic stroke (IS) is a heterogeneous multi-factorial, polygenic, complex disease resulting from the combination of vascular, environmental and genetic factors (Kim et al., 2012). Inflammation and genetics are both prominent mechanisms in the pathogenesis of ischemic stroke (Jin et al., 2010). Candidate genes, stroke susceptible alleles and their association with stroke pathogenesis have been intensively studied in the last few years (Carr et al., 2002, Hansson, 2005, Takashima et al., 2007). Numerous epidemiological studies in twins and families have revealed that the genetic factors in addition to other risk factors are involved in the predisposition of stroke. Recent findings have suggested that variations in the pro and anti-inflammatory cytokine genes may be associated with the risk of stroke. The genes encoding interleukin-1α (IL-1α), CD14 cell surface glycoprotein (CD14), galectin-2-encoding gene (LGALS2) and proteasome subunit type 6 (PSMA6), all of which are involved in the inflammatory mechanisms, were reported to be involved in the pathogenesis of cerebrovascular diseases (Takashima et al., 2007, Ozaki et al., 2006, Um et al., 2003, Wright et al., 1990, DeGraba, 2004). CD14 is a receptor for bacterial lipopolysaccharide (LPS, endotoxin), and it mediates cell activation by LPS, while IL-1α acts as a proinflammatory cytokine which contributes to atherogenesis. Increased activity of PSMA6 activates the nuclear factor КB (NF-КB). (NF-КB) is a central transcription factor that regulates the expression of the genes of adhesion molecules and cytokines which are involved in atherogenesis. LGALS2 gene C3279T is encoded by galectin-2 which is thought to reduce the transcriptional level of galectin-2, and also play a role in protection against myocardial infarction. The single nucleotide polymorphisms (SNPs) present in the genes CD14 (-C260T), IL-1α (-C511T, -C889T), LGALS2 (-C3279T) and PSMA6 (-C8G) respectively, were found to be associated with increased risk of cardiovascular diseases in different populations, but limited studies have been published so far examining these SNPs and their association with susceptibility for IS. Since a single study may not prove to be sufficient in providing reliable conclusions because of the presence of small amounts of subjects and weight age of statistical and clinical heterogeneities, therefore, we carried out this meta-analysis, which combines the eligible published literatures based on quantitative synthesis to obtain a more convincing assessment of the association between these inflammatory gene polymorphisms and risk of IS.

Materials and methods

Identification of relevant studies

A literature search for eligible candidate gene studies published before August 31, 2015 was conducted in the PubMed, Medline, EMBASE, OVID and Google Scholar databases. The following combinations of main keywords were used: (‘Interleukin-1 alpha’ or ‘IL-1α’ or ‘IL1F1’) and (‘CD14 cell surface glycoprotein’ or ‘CD14’) and (‘Galectin-2-encoding gene’ or ‘LGALS2’ or ‘HL14’) and (‘proteasome subunit type 6’ or ‘PSMA6’) and (‘ischemic stroke’ or ‘cerebral infarction’ or ‘IS’) and (‘genetic polymorphism’ or ‘single nucleotide polymorphisms’ or ‘SNP’). Fixed or random effects models were used to estimate the Pooled Odds ratio (OR) and 95% confidence interval (CI). Begg's funnel plot was used to assess the publication bias in the studies. Meta-analysis was carried out by using RevMan 5.3 software.

Inclusion and exclusion criteria

To be included in the analysis, eligible studies have to meet the following criteria: (1) case–control studies on the association between the IL-1α (-C889T or -C511T); CD14 (-C260T); LGALS2 (-C3279T); PSMA6 (-C8G) genetic polymorphisms and susceptibility to IS; (2) all patients in the candidate studies meet the diagnostic criteria for IS; (3) studies with sufficient available data to calculate ORs with corresponding 95% CIs. The major reasons for excluding studies were: (1) not a case–control study; (2) duplicate publications with overlapping subjects from the same study; and (3) no available data reported. This meta-analysis was conducted according to the Preferred Reporting Items for Systematic Reviews and Meta-analyses (PRISMA) guideline (Moher et al., 2009). No author was contacted regarding the missing information that was required for the meta-analysis to avoid the risk of retrieval bias.

Data extraction

According to the PRISMA guidelines, two investigators independently SM and PK checked each full-text report for eligibility and extracted the following data from eligible studies: surname of first author, year of publication, country of origin, ethnicity, definition and number of case and control, age, sex ratio, genotyping method and genotype frequency, etc. Disagreements were solved by discussion between all authors until consensus was reached.

Quality assessment

We also evaluated the methodological quality of every study which is included in our analysis using a quality assessment scale developed for genetic association studies (Attia et al., 2003) which was modified by us to increase the relevance of our study. This scale took into account both traditional epidemiological considerations and genetic issues. The scores ranged from 0 (worst) to 16 (best). Details of the scale are presented in Table 1. Two authors independently assessed the quality of included studies. Discrepancies over quality scores were resolved by discussion among all the authors and subsequent consensus was reached.
Table 1

Scale for quality assessment.

CriteriaScore
Representativeness of cases
Selected from any population disease registry or multiple center sites2
Selected from any cardiology/neurology1
Not described0



Source of controls
Population or neighbor based3
Hospital based2
Healthy volunteers with total description1
Healthy volunteers without total description0.5
Not described0



Matching of controls
Age & sex match2
Smoking, hypertensive, diabetics1
Not matched0



Ascertainment of IS
Adequate confirmation2
Diagnosis of IS by patient medical record1
Not described0



Ascertainment of controls
Stroke frees status by using appropriate QVSS or CT/MRI1
Not described0



Genotyping
Genotyping done under blinded conditions1
Unblinded or not mentioned0



Genotyping method
DNA sequencing/multiplex PCR2
PCR-RFLP1
Others0



HWE
Allelic frequency in accordance HWE2
Not HWE but followed statistics to adjust confounding1
Not checked0



Association assessment
Appropriate statistics and examining confounders and effect modifiers1
Inappropriate statistics used Inappropriate statistics used0
Total score16

Statistical analysis

Genotype distributions in the controls were tested for confirmation to Hardy–Weinberg equilibrium (HWE) using the chi-square test. The association between the inflammatory genetic polymorphisms and susceptibility to IS was assessed by the pooled OR with their corresponding 95% CI under two genetic models, including dominant and recessive models. Taking into consideration possible heterogeneity between-study, a statistical test for heterogeneity was first conducted using Cochran's Q statistic and I2 metric (Higgins et al., 2003). We considered the presence of significant heterogeneity at the 10% level of significance and values of I2 exceeding 50% as an indicator of significant heterogeneity. When no heterogeneity was found with P < 0.10 or I2, 50%, a fixed-effect model was used to estimate the pooled ORs and 95% CIs. Otherwise, a random-effect model was applied. Begg's funnel plot was used to assess the potential for publication bias.

Results

A total of 99 published articles were identified by using the pre-specified search strategy. Fig. 1 depicts a flow chart of both the retrieved and excluded studies with their reasons for exclusion. Out of 99 retrieved articles, 42 studies were excluded due to its irrelevancy to our interest and 9 studies were excluded as they were in duplicate records. Keeping the inclusion criteria in mind, 21 case–control studies were included in our meta-analysis. Studies were carried out in two major ethnic populations; 9 studies were in Asian and the other 11 studies were in Caucasian population. The publication years of the included studies ranged from 2000 to 2013. 17 studies in this meta-analysis had controls in HWE. The quality scores of all included studies were moderately high. Out of 21 studies, 8 studies had hospital based and 13 studies had population based source of controls. Begg's funnel plot suggested significant publication bias in the studies (Fig. 3). Table 2 gives a summary of the characteristics and methodological quality of all the included studies.
Fig. 1

Flow diagram of the selection of studies and specific reasons for exclusion from the present meta-analysis.

Fig. 3

Begg's funnel plot for assessing publication bias for (1) IL1α-C889T, (2) IL1α-C511T, (3) PSMA6- C8G, (4) LGALS2-C3279T and (5) CD14-C260T gene polymorphisms.

Table 2

Characteristic of studies included in the meta-analysis of the association of TNF-α gene polymorphism with the risk of ischemic stroke.

S. noAuthor, yearOriginEthnicitySample size case(N)/control(N)Gene polymorphismVariantPCR-methodMatching criteriaM/FCase M/FControl M/FAgeCase/controlHWESource of controlQuality score
1.Banerjee I, 2008(Banerjee et al., 2008)IndiaAsian112/212IL-1α PSMA6C889T 8C/GPCR-RFLPAge–sex and geography72/40143/6958.6 ± 14.257.4 ± 8.8YesHB10
2.Olsson S, 2012(Olsson et al., 2012)SwedenCaucasian844/668IL-1αC889T C511TNAAge–sex554/290392/27659 (51–64)58 (50–64)YesPB12
3.Li N, 2010(Li et al., 2010)ChinaAsian371/371IL-1αC889T C511TPCR-RFLPNA230/141247/12463.88 ± 7.3662.87 ± 7.57YesPB12
4.Zhao J, 2012(Zhao et al., 2012)ChinaAsian682/598IL-1αC889TPCR-RFLPAge–sex403/279336/26262.09 ± 9.4361.84 ± 10.12YesHB13
5.Zhang Z, 2013(Zhang et al., 2013)ChinaAsian440/486IL-1αC889T C511TPCR-sequencingAge–sex291/149314/17266.6 ± 8.466.1 ± 5.2YesHB13
6.Zee RYL, 2008 (Zee et al., 2008)USACaucasian258/258IL-1αC511TABI fluorescence-based allelic discriminationAge–smokingGeography62.1 ± 0.561.7 ± 0.5YesPB11
7.Um JY, 2003 (Um et al., 2003)KoreaAsian360/519IL-1αC889TPCR-RFLPAge–sex177/183250/26961.0 ± 14.562.2 ± 9.8YesHB10
8.Lai J, 2006ChinaAsian112/95IL-1αC511TPCR-RFLPGeography72/4060/3556.9 ± 13.157.4 ± 10.0YesPB11
9.Dziedzic T, 2005 (a)PolandCaucasian122/227IL-1αC511TPCR-RFLPAge–sex66/56123/10463.2 ± 12.462.8 ± 12.4YesHB12
10.Dziedzic T, 2005 (b)PolandCaucasian221/219IL-1αC511TPCR-RFLPAge–sex91/13094/12570.4 ± 13.169.2 ± 13.0YesHB12
11.Rubattu S, 2005ItalyCaucasian115/180IL-1αC511TPCR-RFLPAge51/6498/8235.95 ± 8.1234.7 ± 6.9YesPB12
12.Lacoviello L, 2005ItalyCaucasian134/134IL-1αC511TDNA sequencingAge–sex69/6565/6535 ± 735 ± 8YesPB15
13.Seripa D, 2003ItalyCaucasian101/110IL-1αC511TPCR-RFLPAge51/50 60/5065.8 ± 10.463.7 ± 14.0YesPB12
14.Freilinger T, 2009 (Freilinger et al., 2009)GermanyCaucasian601/736PSMA6 LGALS28C/G C3279TMALDI-TOF mass spectrometryAge–sex377/− 447/−64/− 62/−YesHB10
15.Szolnoki Z, 2009 (Szolnoki et al., 2009)HungaryCaucasian385/303LGALS2C3279TPCR-RFLPNA222/163201/10267.4 ± 13.6557.4 ± 14.3YesHB9
16.Lin TM, 2008 (Lin et al., 2008)TaiwanAsian450/450CD14C260TPCR-RFLPAge–sex248/202252/19864.2 ± 12.763.2 ± 12.3NoPB10
17.Lichy C, 2002 (Lichy et al., 2002)GermanyCaucasian151/149CD14C260TPCR-RFLPAge-sex107/44 109/4059.7 ± 10.858.1 ± 10.1NoPB10
18.Zee RYL, 2002(Zee et al., 2002)USACaucasian338/338CD14C260TPCR-FRLPAge–smokingNA61.0 ± 8.360.5 ± 8.2YesHB11
19.Ito D, 2000 (Ito et al., 2000)JapanAsian235/309CD14C260TPCR-RFLPAge–sex183/52238/7158.3 ± 7.858. ± 64.4NoHB9
20.Kis Z, 2007 (Kis et al., 2007)HungaryCaucasian59/52CD14C260TNested PCRNA38/2126/2652.850.4NoHB8
21.Park MH, 2006KoreaAsian125/125CD14C260TPCR-RFLPAge–sex63/6263/6266.74 ± 7.6966.84 ± 7.86YesHB13

Abbreviations: PCR — polymerase chain reaction; RFLP — restriction fragment length polymorphism; M — male; F — female; NA — not available; PB — population based; HB — hospital based; MALDI-TOF — matrix assisted laser desorption ionization-time of flight; and HWE — Hardy Weinberg equilibrium.

IL-1α gene polymorphism with the susceptibility of IS

For C889T, six case–control studies with a total of 2809 IS patients and 2854 controls showed a non-significant association with susceptibility to IS under dominant [TT + TC vs. CC: OR = 1.18, 95% CI: 0.67–2.08, P = 0.58], and recessive models [TT vs. CC + TC: OR = 1.15, 95% CI: 0.82–1.62, P = 0.43] (Fig. 2).
Fig. 2

Forest plot for the association between (1) IL1α-C889T, (2) IL1α-C511T, (3) PSMA6-C8G, (4) LGALS2-C3279T and (5) CD14-C260T gene polymorphisms and IS risk under (A) dominant model, (B) recessive model.

For C511T, 10 case–control studies with a total of 2718 IS patients and 2748 controls showed a non-significant association with susceptibility to IS under dominant [TT + TC vs. CC: OR = 0.95, 95% CI: 0.66–1.37, P = 0.77] and recessive models [TT vs. CC + TC: OR = 1.17, 95% CI: 0.88–1.54, P = 0.28] (Fig. 2).

PSMA6 gene polymorphism with the susceptibility of IS

For PSMA6-C8G genetic polymorphism, two case–control studies with a total of 713 IS patients and 948 controls showed a non-significant association with susceptibility to IS under dominant model [GG + GC vs. CC: OR = 0.35, 95% CI: 0.08–1.54, P = 0.16] and a protective level of association with the recessive model [GG vs. CC + GC: OR = 0.25, 95% CI: 0.08–0.72, P = 0.01] (Fig. 2).

LGALS2 gene polymorphism with the susceptibility of IS

For LGALS2-C2379T genetic polymorphism, two case–control studies with a total of 986 IS patients and 1039 controls showed a non-significant association with susceptibility to IS under dominant [TT + CT vs. CC: OR = 0.29, 95% CI: 0.02–4.26, P = 0.37] and recessive models [TT vs. CC + TC: OR = 0.44, 95% CI: 0.09–2.09, P = 0.30] (Fig. 2).

CD14 gene polymorphism with the susceptibility of IS

For CD14-C260T genetic polymorphism, six case-control studies with a total of 1358 IS patients and 1423 controls showed a non-significant association with susceptibility to IS under dominant [TT + TC vs. CC: OR = 0.93, 95% CI: 0.77–1.11, P = 0. 42] and recessive models [TT vs. CC + TC: OR = 1.02, 95% CI: 0.86–1.21, P = 0. 81] (Fig. 2).

Discussion

In our comprehensive meta-analysis, five SNPs of four genes involving 21 studies with 6216 IS cases and 6539 controls were analyzed. Our findings suggest that the variants in the inflammatory genes did not show any significant association with the risk of IS. No significant association was observed under both dominant and recessive models of IL-1α (-C889T and -C511T), CD14 (-C159T), LGALS2 (-C3279T) and dominant model of PSMA6 (-C8G) gene polymorphisms with the risk of IS. However, the recessive model of PSMA6 (-C8G) gene polymorphism showed a protective level of association with susceptibility to IS. Our findings are consistent with the recently published meta-analysis of IL-1α showing no significant association with the risk of IS for C511T, however Zou et al. (2015) concluded that IL-1α (-C889T) was found to be associated with the risk of IS (Zou et al., 2015). Previous meta-analysis by Ye et al. (2012) also showed no association for IL-1α (C889T and C511T) with the risk of IS in overall population. But, T allele of IL-1α C511T showed a 1.97 fold risk of IS in Polish population compared with the control group. It may be possible that the effect of IL-1α C511T polymorphism on IS risk might be modified by age or other unknown factors (Ye et al., 2012). Meta-analysis published by Pu et al. (2013) suggested that CD14 (-C-260T) polymorphism is a risk factor of coronary heart disease (CHD), especially in East Asians (Pu et al., 2013). Our meta-analysis is the first meta-analysis to report the association of inflammatory gene polymorphisms with the risk of IS to the best of our knowledge. Overall findings did not observe any significant association between IL-1α (-C889T and -C511T), CD14 (-C159T), LGALS2 (-C3279T) and PSMA6 (-C8G) gene polymorphisms and risk of IS. The present meta-analysis must be interpreted with caution because of certain limitations. First, the studies included in meta-analysis were varied in ethnicity, age and environmental factors. Second, the use of different methodologies for genotyping method, selection of controls and matching criteria may have lead to heterogeneity. Therefore, more credible evidences are required to illustrate solid conclusions on the association between inflammatory gene polymorphisms and risk of IS. In summary, our meta-analysis shows that IL-1α (-C889T and -C511T), CD14 (-C159T), LGALS2 (-C3279T) and gene polymorphisms are not significantly associated with the risk of IS while PSMA6 (-C8G) gene polymorphism may play a protective role with the susceptibility of IS. Further prospective large epidemiological studies are needed to confirm these findings.

Funding source

None.

Conflict of interest

No potential conflict of interest.
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