| Literature DB >> 27006821 |
Jamshid M Ashurov1, Nodira J Obidova1, Hudaybergen B Abdireymov2, Bakhtiyar T Ibragimov1.
Abstract
The reaction of 2-(2-oxo-2,3-di-hydro-1,3-benzo-thia-zol-3-yl)acetic acid (Entities:
Keywords: crystal structure; hydrogen bonding; triethanolamine; α-(N-benzothiazolin-2-one) acetic acid
Year: 2016 PMID: 27006821 PMCID: PMC4778810 DOI: 10.1107/S2056989016002930
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of (I), showing the atom-labelling scheme. Unlabelled atoms are generated by the inversion centre.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O4—H4⋯O2i | 0.88 (3) | 1.71 (3) | 2.572 (4) | 166 (3) |
| O5—H5⋯O3ii | 0.86 (1) | 1.75 (2) | 2.577 (4) | 159 (3) |
| O6—H6⋯O2 | 0.82 | 1.88 | 2.697 (4) | 173 |
| C8—H8 | 0.97 | 2.48 | 3.432 (6) | 167 |
| C12—H12 | 0.97 | 2.53 | 3.455 (6) | 159 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .
Figure 2Part of the crystal structure with hydrogen bonds shown as dashed lines. For clarity, H atoms not involved in hydrogen bonding are not shown.
Figure 3The crystal structure packing of (I). Hydrogen bonds are indicated by black dashed lines and π–π stacking interactions by red dashed lines.
Experimental details
| Crystal data | |
| Chemical formula | [Co(C6H15NO3)2](C9H6NO3S)2 |
|
| 773.73 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 293 |
|
| 14.6953 (6), 9.7043 (3), 12.1311 (4) |
| β (°) | 98.513 (4) |
|
| 1710.94 (11) |
|
| 2 |
| Radiation type | Cu |
| μ (mm−1) | 5.66 |
| Crystal size (mm) | 0.28 × 0.24 × 0.18 |
| Data collection | |
| Diffractometer | Oxford Diffraction Xcalibur Ruby |
| Absorption correction | Multi-scan (SCALE3 ABSPACK in |
|
| 0.280, 0.797 |
| No. of measured, independent and observed [ | 7096, 3487, 2693 |
|
| 0.048 |
| (sin θ/λ)max (Å−1) | 0.629 |
| Refinement | |
|
| 0.061, 0.175, 1.03 |
| No. of reflections | 3487 |
| No. of parameters | 230 |
| No. of restraints | 6 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.47, −0.53 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009 ▸), SHELXS97, SHELXL97 XP and SHELXTL (Sheldrick, 2008 ▸).
| [Co(C6H15NO3)2](C9H6NO3S)2 | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 1414 reflections |
| θ = 3.7–75.3° | |
| µ = 5.66 mm−1 | |
| β = 98.513 (4)° | Block, dark orange |
| 0.28 × 0.24 × 0.18 mm | |
| Oxford Diffraction Xcalibur Ruby diffractometer | 3487 independent reflections |
| Radiation source: fine-focus sealed tube | 2693 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.2576 pixels mm-1 | θmax = 75.8°, θmin = 5.5° |
| ω scans | |
| Absorption correction: multi-scan (SCALE3 ABSPACK in | |
| 7096 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3487 reflections | (Δ/σ)max < 0.001 |
| 230 parameters | Δρmax = 0.47 e Å−3 |
| 6 restraints | Δρmin = −0.53 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 1.0000 | 0.0000 | 1.0000 | 0.0321 (2) | |
| S1 | 1.42643 (10) | 0.51313 (12) | 1.23063 (9) | 0.0613 (3) | |
| O4 | 1.09939 (16) | −0.1150 (3) | 1.1029 (2) | 0.0405 (6) | |
| H4 | 1.1359 (16) | −0.175 (3) | 1.078 (2) | 0.061* | |
| O2 | 1.21319 (18) | 0.7409 (3) | 1.0090 (3) | 0.0511 (7) | |
| O5 | 0.92168 (17) | 0.0172 (2) | 1.1309 (2) | 0.0397 (6) | |
| H5 | 0.8630 (7) | 0.025 (4) | 1.130 (2) | 0.060* | |
| C4 | 1.3618 (3) | 0.3107 (6) | 0.8983 (4) | 0.0640 (12) | |
| H4A | 1.3469 | 0.2728 | 0.8275 | 0.077* | |
| N2 | 1.07355 (19) | 0.1681 (3) | 1.0879 (2) | 0.0354 (6) | |
| O6 | 1.1297 (3) | 0.4967 (3) | 0.9585 (3) | 0.0719 (11) | |
| H6 | 1.1537 | 0.5703 | 0.9793 | 0.108* | |
| O3 | 1.25064 (18) | 0.9228 (3) | 0.9142 (3) | 0.0593 (8) | |
| O1 | 1.4058 (3) | 0.7837 (3) | 1.1993 (3) | 0.0715 (9) | |
| N1 | 1.3885 (2) | 0.6444 (3) | 1.0445 (3) | 0.0432 (7) | |
| C11 | 1.0861 (3) | 0.2771 (4) | 1.0053 (3) | 0.0455 (9) | |
| H11A | 1.0256 | 0.3054 | 0.9693 | 0.055* | |
| H11B | 1.1176 | 0.2363 | 0.9484 | 0.055* | |
| C1 | 1.4051 (2) | 0.4195 (4) | 1.1068 (3) | 0.0441 (8) | |
| C9 | 1.2684 (2) | 0.8119 (4) | 0.9634 (3) | 0.0437 (8) | |
| C10 | 1.1382 (3) | 0.4043 (4) | 1.0483 (3) | 0.0507 (9) | |
| H10A | 1.1122 | 0.4435 | 1.1102 | 0.061* | |
| H10B | 1.2024 | 0.3826 | 1.0731 | 0.061* | |
| C6 | 1.3850 (2) | 0.5060 (4) | 1.0156 (3) | 0.0405 (8) | |
| C13 | 1.1640 (3) | 0.1118 (4) | 1.1391 (4) | 0.0535 (10) | |
| H13A | 1.1899 | 0.1712 | 1.2002 | 0.064* | |
| H13B | 1.2056 | 0.1126 | 1.0841 | 0.064* | |
| C15 | 1.0160 (3) | 0.2213 (4) | 1.1688 (3) | 0.0464 (9) | |
| H15A | 0.9732 | 0.2890 | 1.1321 | 0.056* | |
| H15B | 1.0551 | 0.2672 | 1.2292 | 0.056* | |
| C8 | 1.3671 (3) | 0.7592 (4) | 0.9693 (4) | 0.0500 (10) | |
| H8A | 1.3771 | 0.7314 | 0.8952 | 0.060* | |
| H8B | 1.4092 | 0.8341 | 0.9928 | 0.060* | |
| C7 | 1.4049 (3) | 0.6711 (5) | 1.1570 (4) | 0.0520 (10) | |
| C12 | 1.1576 (3) | −0.0320 (5) | 1.1821 (4) | 0.0542 (11) | |
| H12A | 1.2186 | −0.0725 | 1.1962 | 0.065* | |
| H12B | 1.1329 | −0.0298 | 1.2520 | 0.065* | |
| C3 | 1.3811 (3) | 0.2232 (5) | 0.9886 (4) | 0.0628 (12) | |
| H3 | 1.3783 | 0.1283 | 0.9781 | 0.075* | |
| C5 | 1.3638 (3) | 0.4522 (5) | 0.9094 (3) | 0.0522 (10) | |
| H5A | 1.3512 | 0.5095 | 0.8475 | 0.063* | |
| C2 | 1.4045 (3) | 0.2764 (4) | 1.0941 (4) | 0.0540 (10) | |
| H2 | 1.4195 | 0.2186 | 1.1552 | 0.065* | |
| C14 | 0.9626 (3) | 0.1087 (4) | 1.2162 (3) | 0.0480 (9) | |
| H14A | 1.0035 | 0.0572 | 1.2714 | 0.058* | |
| H14B | 0.9148 | 0.1495 | 1.2530 | 0.058* |
| Co1 | 0.0309 (4) | 0.0303 (4) | 0.0344 (4) | 0.0010 (3) | 0.0022 (3) | 0.0001 (3) |
| S1 | 0.0879 (9) | 0.0538 (7) | 0.0408 (5) | 0.0058 (5) | 0.0049 (5) | 0.0012 (4) |
| O4 | 0.0378 (12) | 0.0369 (14) | 0.0464 (13) | 0.0066 (10) | 0.0050 (10) | 0.0020 (11) |
| O2 | 0.0412 (13) | 0.0348 (14) | 0.0799 (19) | 0.0011 (11) | 0.0180 (13) | 0.0036 (13) |
| O5 | 0.0371 (12) | 0.0378 (14) | 0.0445 (14) | −0.0006 (10) | 0.0072 (10) | −0.0045 (10) |
| C4 | 0.056 (2) | 0.075 (3) | 0.058 (3) | 0.007 (2) | −0.001 (2) | −0.025 (2) |
| N2 | 0.0368 (14) | 0.0308 (15) | 0.0384 (14) | −0.0032 (11) | 0.0050 (11) | −0.0025 (12) |
| O6 | 0.090 (3) | 0.048 (2) | 0.072 (2) | −0.0219 (16) | −0.007 (2) | 0.0152 (16) |
| O3 | 0.0405 (14) | 0.0499 (18) | 0.089 (2) | 0.0076 (13) | 0.0143 (14) | 0.0197 (16) |
| O1 | 0.094 (3) | 0.0485 (19) | 0.069 (2) | 0.0017 (17) | 0.0040 (18) | −0.0165 (16) |
| N1 | 0.0388 (15) | 0.0467 (19) | 0.0439 (16) | 0.0064 (13) | 0.0056 (12) | 0.0039 (14) |
| C11 | 0.052 (2) | 0.039 (2) | 0.0442 (19) | −0.0072 (17) | 0.0051 (16) | −0.0020 (16) |
| C1 | 0.0381 (17) | 0.048 (2) | 0.046 (2) | 0.0000 (16) | 0.0090 (15) | −0.0006 (17) |
| C9 | 0.0375 (17) | 0.041 (2) | 0.052 (2) | 0.0019 (15) | 0.0066 (15) | −0.0002 (17) |
| C10 | 0.057 (2) | 0.043 (2) | 0.051 (2) | −0.0116 (18) | 0.0041 (18) | −0.0016 (18) |
| C6 | 0.0294 (15) | 0.050 (2) | 0.0422 (19) | 0.0057 (14) | 0.0044 (14) | −0.0037 (16) |
| C13 | 0.041 (2) | 0.049 (2) | 0.066 (2) | −0.0023 (17) | −0.0108 (18) | −0.012 (2) |
| C15 | 0.055 (2) | 0.040 (2) | 0.045 (2) | −0.0034 (17) | 0.0101 (17) | −0.0086 (17) |
| C8 | 0.0390 (18) | 0.051 (2) | 0.062 (2) | 0.0061 (17) | 0.0114 (17) | 0.011 (2) |
| C7 | 0.054 (2) | 0.047 (2) | 0.054 (2) | 0.0028 (18) | 0.0059 (18) | −0.003 (2) |
| C12 | 0.055 (2) | 0.048 (2) | 0.053 (2) | 0.0105 (18) | −0.0121 (19) | −0.0029 (19) |
| C3 | 0.052 (2) | 0.051 (3) | 0.086 (3) | 0.000 (2) | 0.014 (2) | −0.017 (2) |
| C5 | 0.046 (2) | 0.066 (3) | 0.043 (2) | 0.013 (2) | 0.0007 (17) | −0.009 (2) |
| C2 | 0.053 (2) | 0.044 (2) | 0.067 (3) | 0.0011 (18) | 0.014 (2) | 0.003 (2) |
| C14 | 0.056 (2) | 0.048 (2) | 0.0405 (19) | −0.0068 (18) | 0.0112 (16) | −0.0064 (17) |
| Co1—O4 | 2.097 (2) | C11—C10 | 1.505 (5) |
| Co1—O4i | 2.097 (2) | C11—H11A | 0.9700 |
| Co1—O5i | 2.101 (3) | C11—H11B | 0.9700 |
| Co1—O5 | 2.101 (3) | C1—C6 | 1.386 (5) |
| Co1—N2i | 2.151 (3) | C1—C2 | 1.398 (6) |
| Co1—N2 | 2.151 (3) | C9—C8 | 1.529 (5) |
| S1—C1 | 1.744 (4) | C10—H10A | 0.9700 |
| S1—C7 | 1.779 (5) | C10—H10B | 0.9700 |
| O4—C12 | 1.436 (5) | C6—C5 | 1.382 (5) |
| O4—H4 | 0.875 (9) | C13—C12 | 1.498 (6) |
| O2—C9 | 1.254 (4) | C13—H13A | 0.9700 |
| O5—C14 | 1.427 (4) | C13—H13B | 0.9700 |
| O5—H5 | 0.863 (9) | C15—C14 | 1.509 (5) |
| C4—C5 | 1.380 (7) | C15—H15A | 0.9700 |
| C4—C3 | 1.382 (7) | C15—H15B | 0.9700 |
| C4—H4A | 0.9300 | C8—H8A | 0.9700 |
| N2—C15 | 1.480 (4) | C8—H8B | 0.9700 |
| N2—C13 | 1.486 (5) | C12—H12A | 0.9700 |
| N2—C11 | 1.487 (5) | C12—H12B | 0.9700 |
| O6—C10 | 1.401 (5) | C3—C2 | 1.374 (6) |
| O6—H6 | 0.8200 | C3—H3 | 0.9300 |
| O3—C9 | 1.239 (5) | C5—H5A | 0.9300 |
| O1—C7 | 1.207 (5) | C2—H2 | 0.9300 |
| N1—C7 | 1.374 (5) | C14—H14A | 0.9700 |
| N1—C6 | 1.387 (5) | C14—H14B | 0.9700 |
| N1—C8 | 1.445 (5) | ||
| O4—Co1—O4i | 179.999 (1) | C11—C10—H10A | 110.6 |
| O4—Co1—O5i | 89.79 (10) | O6—C10—H10B | 110.6 |
| O4i—Co1—O5i | 90.21 (10) | C11—C10—H10B | 110.6 |
| O4—Co1—O5 | 90.21 (10) | H10A—C10—H10B | 108.7 |
| O4i—Co1—O5 | 89.79 (10) | C5—C6—C1 | 120.5 (4) |
| O5i—Co1—O5 | 180.00 (14) | C5—C6—N1 | 126.6 (4) |
| O4—Co1—N2i | 98.40 (10) | C1—C6—N1 | 112.9 (3) |
| O4i—Co1—N2i | 81.60 (10) | N2—C13—C12 | 112.9 (3) |
| O5i—Co1—N2i | 81.74 (10) | N2—C13—H13A | 109.0 |
| O5—Co1—N2i | 98.26 (10) | C12—C13—H13A | 109.0 |
| O4—Co1—N2 | 81.60 (10) | N2—C13—H13B | 109.0 |
| O4i—Co1—N2 | 98.40 (10) | C12—C13—H13B | 109.0 |
| O5i—Co1—N2 | 98.26 (10) | H13A—C13—H13B | 107.8 |
| O5—Co1—N2 | 81.74 (10) | N2—C15—C14 | 112.4 (3) |
| N2i—Co1—N2 | 180.0 | N2—C15—H15A | 109.1 |
| C1—S1—C7 | 91.15 (19) | C14—C15—H15A | 109.1 |
| C12—O4—Co1 | 113.2 (2) | N2—C15—H15B | 109.1 |
| C12—O4—H4 | 105.5 (16) | C14—C15—H15B | 109.1 |
| Co1—O4—H4 | 124.2 (16) | H15A—C15—H15B | 107.9 |
| C14—O5—Co1 | 112.2 (2) | N1—C8—C9 | 113.8 (3) |
| C14—O5—H5 | 105.9 (15) | N1—C8—H8A | 108.8 |
| Co1—O5—H5 | 130.5 (18) | C9—C8—H8A | 108.8 |
| C5—C4—C3 | 122.3 (4) | N1—C8—H8B | 108.8 |
| C5—C4—H4A | 118.8 | C9—C8—H8B | 108.8 |
| C3—C4—H4A | 118.8 | H8A—C8—H8B | 107.7 |
| C15—N2—C13 | 114.6 (3) | O1—C7—N1 | 125.6 (4) |
| C15—N2—C11 | 109.8 (3) | O1—C7—S1 | 125.2 (3) |
| C13—N2—C11 | 110.5 (3) | N1—C7—S1 | 109.2 (3) |
| C15—N2—Co1 | 107.4 (2) | O4—C12—C13 | 110.6 (3) |
| C13—N2—Co1 | 106.3 (2) | O4—C12—H12A | 109.5 |
| C11—N2—Co1 | 108.0 (2) | C13—C12—H12A | 109.5 |
| C10—O6—H6 | 109.5 | O4—C12—H12B | 109.5 |
| C7—N1—C6 | 115.3 (3) | C13—C12—H12B | 109.5 |
| C7—N1—C8 | 118.2 (3) | H12A—C12—H12B | 108.1 |
| C6—N1—C8 | 126.1 (3) | C2—C3—C4 | 120.1 (5) |
| N2—C11—C10 | 117.2 (3) | C2—C3—H3 | 120.0 |
| N2—C11—H11A | 108.0 | C4—C3—H3 | 120.0 |
| C10—C11—H11A | 108.0 | C4—C5—C6 | 117.7 (4) |
| N2—C11—H11B | 108.0 | C4—C5—H5A | 121.1 |
| C10—C11—H11B | 108.0 | C6—C5—H5A | 121.1 |
| H11A—C11—H11B | 107.2 | C3—C2—C1 | 118.2 (4) |
| C6—C1—C2 | 121.1 (4) | C3—C2—H2 | 120.9 |
| C6—C1—S1 | 111.2 (3) | C1—C2—H2 | 120.9 |
| C2—C1—S1 | 127.6 (3) | O5—C14—C15 | 111.2 (3) |
| O3—C9—O2 | 125.8 (3) | O5—C14—H14A | 109.4 |
| O3—C9—C8 | 116.4 (3) | C15—C14—H14A | 109.4 |
| O2—C9—C8 | 117.8 (3) | O5—C14—H14B | 109.4 |
| O6—C10—C11 | 105.9 (3) | C15—C14—H14B | 109.4 |
| O6—C10—H10A | 110.6 | H14A—C14—H14B | 108.0 |
| O4i—Co1—O4—C12 | −139 (11) | C2—C1—C6—N1 | 179.6 (3) |
| O5i—Co1—O4—C12 | 103.4 (3) | S1—C1—C6—N1 | 1.1 (4) |
| O5—Co1—O4—C12 | −76.6 (3) | C7—N1—C6—C5 | 175.5 (4) |
| N2i—Co1—O4—C12 | −175.0 (3) | C8—N1—C6—C5 | 2.5 (6) |
| N2—Co1—O4—C12 | 5.0 (3) | C7—N1—C6—C1 | −4.1 (5) |
| O4—Co1—O5—C14 | 72.2 (2) | C8—N1—C6—C1 | −177.1 (3) |
| O4i—Co1—O5—C14 | −107.8 (2) | C15—N2—C13—C12 | 80.4 (4) |
| O5i—Co1—O5—C14 | −141.4 (8) | C11—N2—C13—C12 | −154.9 (3) |
| N2i—Co1—O5—C14 | 170.7 (2) | Co1—N2—C13—C12 | −38.0 (4) |
| N2—Co1—O5—C14 | −9.3 (2) | C13—N2—C15—C14 | −83.1 (4) |
| O4—Co1—N2—C15 | −105.4 (2) | C11—N2—C15—C14 | 151.8 (3) |
| O4i—Co1—N2—C15 | 74.6 (2) | Co1—N2—C15—C14 | 34.7 (4) |
| O5i—Co1—N2—C15 | 166.0 (2) | C7—N1—C8—C9 | −77.0 (5) |
| O5—Co1—N2—C15 | −14.0 (2) | C6—N1—C8—C9 | 95.8 (4) |
| N2i—Co1—N2—C15 | −5 (14) | O3—C9—C8—N1 | 169.0 (4) |
| O4—Co1—N2—C13 | 17.6 (2) | O2—C9—C8—N1 | −10.3 (5) |
| O4i—Co1—N2—C13 | −162.4 (2) | C6—N1—C7—O1 | −176.0 (4) |
| O5i—Co1—N2—C13 | −70.9 (3) | C8—N1—C7—O1 | −2.4 (6) |
| O5—Co1—N2—C13 | 109.1 (3) | C6—N1—C7—S1 | 4.9 (4) |
| N2i—Co1—N2—C13 | 118 (14) | C8—N1—C7—S1 | 178.5 (3) |
| O4—Co1—N2—C11 | 136.3 (2) | C1—S1—C7—O1 | 177.4 (4) |
| O4i—Co1—N2—C11 | −43.7 (2) | C1—S1—C7—N1 | −3.5 (3) |
| O5i—Co1—N2—C11 | 47.7 (2) | Co1—O4—C12—C13 | −26.9 (4) |
| O5—Co1—N2—C11 | −132.3 (2) | N2—C13—C12—O4 | 44.2 (5) |
| N2i—Co1—N2—C11 | −123 (13) | C5—C4—C3—C2 | −0.9 (7) |
| C15—N2—C11—C10 | 64.6 (4) | C3—C4—C5—C6 | −0.7 (7) |
| C13—N2—C11—C10 | −62.7 (4) | C1—C6—C5—C4 | 1.1 (6) |
| Co1—N2—C11—C10 | −178.6 (3) | N1—C6—C5—C4 | −178.4 (4) |
| C7—S1—C1—C6 | 1.4 (3) | C4—C3—C2—C1 | 2.0 (6) |
| C7—S1—C1—C2 | −177.0 (4) | C6—C1—C2—C3 | −1.6 (6) |
| N2—C11—C10—O6 | −172.3 (4) | S1—C1—C2—C3 | 176.6 (3) |
| C2—C1—C6—C5 | 0.1 (6) | Co1—O5—C14—C15 | 30.8 (4) |
| S1—C1—C6—C5 | −178.4 (3) | N2—C15—C14—O5 | −44.5 (4) |
| H··· | ||||
| O4—H4···O2ii | 0.88 (3) | 1.71 (3) | 2.572 (4) | 166 (3) |
| O5—H5···O3iii | 0.86 (1) | 1.75 (2) | 2.577 (4) | 159 (3) |
| O6—H6···O2 | 0.82 | 1.88 | 2.697 (4) | 173 |
| C8—H8 | 0.97 | 2.48 | 3.432 (6) | 167 |
| C12—H12 | 0.97 | 2.53 | 3.455 (6) | 159 |