Literature DB >> 26998530

Trend and Network Analysis of Common Eligibility Features for Cancer Trials in ClinicalTrials.gov.

Chunhua Weng1, Anil Yaman2, Kuo Lin1, Zhe He1.   

Abstract

ClinicalTrials.gov has been archiving clinical trials since 1999, with > 165,000 trials at present. It is a valuable but relatively untapped resource for understanding trial design patterns and acquiring reusable trial design knowledge. We extracted common eligibility features using an unsupervised tag-mining method and mined their temporal usage patterns in clinical trials on various cancers. We then employed trend and network analysis to investigate two questions: (1) what eligibility features are frequently used to select patients for clinical trials within one cancer or across multiple cancers; and (2) what are the trends in eligibility feature adoption or discontinuation across cancer research domains? Our results showed that each cancer domain reuses a small set of eligibility features frequently for selecting cancer trial patients and some features are shared across different cancers, with value range adjustments for numerical measures. We discuss the implications for facilitating community-based clinical research knowledge sharing and reuse.

Entities:  

Keywords:  Clinical Trials; Knowledge Management; Patient Selection

Year:  2014        PMID: 26998530      PMCID: PMC4795902          DOI: 10.1007/978-3-319-08416-9_13

Source DB:  PubMed          Journal:  Smart Health (2014)


  18 in total

1.  Better access to information about clinical trials.

Authors:  A T McCray
Journal:  Ann Intern Med       Date:  2000-10-17       Impact factor: 25.391

2.  EON: a component-based approach to automation of protocol-directed therapy.

Authors:  M A Musen; S W Tu; A K Das; Y Shahar
Journal:  J Am Med Inform Assoc       Date:  1996 Nov-Dec       Impact factor: 4.497

3.  Using an information warehouse to screen patients for clinical trials: a prototype.

Authors:  Jyoti Kamal; Kabardhi Pasuparthi; Patrick Rogers; Jason Buskirk; Hagop Mekhjian
Journal:  AMIA Annu Symp Proc       Date:  2005

4.  Analysis of eligibility criteria representation in industry-standard clinical trial protocols.

Authors:  Sanmitra Bhattacharya; Michael N Cantor
Journal:  J Biomed Inform       Date:  2013-06-12       Impact factor: 6.317

5.  Unsupervised mining of frequent tags for clinical eligibility text indexing.

Authors:  Riccardo Miotto; Chunhua Weng
Journal:  J Biomed Inform       Date:  2013-09-10       Impact factor: 6.317

6.  Semi-Automatically Inducing Semantic Classes of Clinical Research Eligibility Criteria Using UMLS and Hierarchical Clustering.

Authors:  Zhihui Luo; Stephen B Johnson; Chunhua Weng
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

7.  A human-computer collaborative approach to identifying common data elements in clinical trial eligibility criteria.

Authors:  Zhihui Luo; Riccardo Miotto; Chunhua Weng
Journal:  J Biomed Inform       Date:  2012-07-27       Impact factor: 6.317

8.  Clustering clinical trials with similar eligibility criteria features.

Authors:  Tianyong Hao; Alexander Rusanov; Mary Regina Boland; Chunhua Weng
Journal:  J Biomed Inform       Date:  2014-02-01       Impact factor: 6.317

9.  The Unified Medical Language System.

Authors:  D A Lindberg; B L Humphreys; A T McCray
Journal:  Methods Inf Med       Date:  1993-08       Impact factor: 2.176

10.  The association between acute lymphoblastic leukemia in children and Helicobacter pylori as the marker for sanitation.

Authors:  Pengiran Hishamuddin
Journal:  BMC Res Notes       Date:  2012-07-03
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  4 in total

1.  Visual aggregate analysis of eligibility features of clinical trials.

Authors:  Zhe He; Simona Carini; Ida Sim; Chunhua Weng
Journal:  J Biomed Inform       Date:  2015-01-20       Impact factor: 6.317

2.  Prediction of black box warning by mining patterns of Convergent Focus Shift in clinical trial study populations using linked public data.

Authors:  Handong Ma; Chunhua Weng
Journal:  J Biomed Inform       Date:  2016-02-03       Impact factor: 6.317

3.  How Have Cancer Clinical Trial Eligibility Criteria Evolved Over Time?

Authors:  Anil Yaman; Shreya Chakrabarti; Anando Sen; Chunhua Weng
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2016-07-20

4.  EliIE: An open-source information extraction system for clinical trial eligibility criteria.

Authors:  Tian Kang; Shaodian Zhang; Youlan Tang; Gregory W Hruby; Alexander Rusanov; Noémie Elhadad; Chunhua Weng
Journal:  J Am Med Inform Assoc       Date:  2017-11-01       Impact factor: 4.497

  4 in total

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