Literature DB >> 26996508

Individual Identifiability Predicts Population Identifiability in Forensic Microsatellite Markers.

Bridget F B Algee-Hewitt1, Michael D Edge1, Jaehee Kim1, Jun Z Li2, Noah A Rosenberg3.   

Abstract

Highly polymorphic genetic markers with significant potential for distinguishing individual identity are used as a standard tool in forensic testing [1, 2]. At the same time, population-genetic studies have suggested that genetically diverse markers with high individual identifiability also confer information about genetic ancestry [3-6]. The dual influence of polymorphism levels on ancestry inference and forensic desirability suggests that forensically useful marker sets with high levels of individual identifiability might also possess substantial ancestry information. We study a standard forensic marker set-the 13 CODIS loci used in the United States and elsewhere [2, 7-9]-together with 779 additional microsatellites [10], using direct population structure inference to test whether markers with substantial individual identifiability also produce considerable information about ancestry. Despite having been selected for individual identification and not for ancestry inference [11], the CODIS markers generate nontrivial model-based clustering patterns similar to those of other sets of 13 tetranucleotide microsatellites. Although the CODIS markers have relatively low values of the F(ST) divergence statistic, their high heterozygosities produce greater ancestry inference potential than is possessed by less heterozygous marker sets. More generally, we observe that marker sets with greater individual identifiability also tend toward greater population identifiability. We conclude that population identifiability regularly follows as a byproduct of the use of highly polymorphic forensic markers. Our findings have implications for the design of new forensic marker sets and for evaluations of the extent to which individual characteristics beyond identification might be predicted from current and future forensic data.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2016        PMID: 26996508     DOI: 10.1016/j.cub.2016.01.065

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  18 in total

1.  Linkage disequilibrium matches forensic genetic records to disjoint genomic marker sets.

Authors:  Michael D Edge; Bridget F B Algee-Hewitt; Trevor J Pemberton; Jun Z Li; Noah A Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-15       Impact factor: 11.205

2.  Mathematical Constraints on FST: Biallelic Markers in Arbitrarily Many Populations.

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Journal:  Genetics       Date:  2017-05-05       Impact factor: 4.562

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4.  A novel set of short microhaplotypes based on non-binary SNPs for forensic challenging samples.

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Review 5.  Forensic genetics through the lens of Lewontin: population structure, ancestry and race.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-04-18       Impact factor: 6.671

6.  Spatially Explicit Models to Investigate Geographic Patterns in the Distribution of Forensic STRs: Application to the North-Eastern Mediterranean.

Authors:  Francesco Messina; Andrea Finocchio; Nejat Akar; Aphrodite Loutradis; Emmanuel I Michalodimitrakis; Radim Brdicka; Carla Jodice; Andrea Novelletto
Journal:  PLoS One       Date:  2016-11-29       Impact factor: 3.240

7.  Genetic variation and population structure of Botswana populations as identified with AmpFLSTR Identifiler short tandem repeat (STR) loci.

Authors:  Tiroyamodimo Tau; Anthony Wally; Thokozile Patricia Fanie; Goitseone Lorato Ngono; Sununguko Wata Mpoloka; Sean Davison; María Eugenia D'Amato
Journal:  Sci Rep       Date:  2017-07-28       Impact factor: 4.379

8.  Human-Genetic Ancestry Inference and False Positives in Forensic Familial Searching.

Authors:  Alyssa Lyn Fortier; Jaehee Kim; Noah A Rosenberg
Journal:  G3 (Bethesda)       Date:  2020-08-05       Impact factor: 3.154

9.  Signs of continental ancestry in urban populations of Peru through autosomal STR loci and mitochondrial DNA typing.

Authors:  Francesco Messina; Tullia Di Corcia; Michele Ragazzo; Cesar Sanchez Mellado; Irene Contini; Patrizia Malaspina; Bianca Maria Ciminelli; Olga Rickards; Carla Jodice
Journal:  PLoS One       Date:  2018-07-18       Impact factor: 3.240

10.  Evaluation of fecal samples as a valid source of DNA by comparing paired blood and fecal samples from American bison (Bison bison).

Authors:  David Forgacs; Rick L Wallen; Amy L Boedeker; James N Derr
Journal:  BMC Genet       Date:  2019-02-26       Impact factor: 2.797

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