Literature DB >> 26993480

Application of a Mass Spectrometric Approach to Detect the Presence of Fatty Acid Biosynthetic Phosphopeptides.

Benjamin Yii Chung Lau1,2,3, Stefan Clerens4, James D Morton5, Jolon M Dyer4,5, Santanu Deb-Choudhury4, Umi Salamah Ramli6.   

Abstract

The details of plant lipid metabolism are relatively well known but the regulation of fatty acid production at the protein level is still not understood. Hence this study explores the importance of phosphorylation as a mechanism to control the activity of fatty acid biosynthetic enzymes using low and high oleic acid mesocarps of oil palm fruit (Elaeis guineensis variety of Tenera). Adaptation of neutral loss-triggered tandem mass spectrometry and selected reaction monitoring to detect the neutral loss of phosphoric acid successfully found several phosphoamino acid-containing peptides. These peptides corresponded to the peptides from acetyl-CoA carboxylase and 3-enoyl-acyl carrier protein reductase as identified by their precursor ion masses. These findings suggest that these enzymes were phosphorylated at 20th week after anthesis. Phosphorylation could have reduce their activities towards the end of fatty acid biosynthesis at ripening stage. Implication of phosphorylation in the regulation of fatty acid biosynthesis at protein level has never been reported.

Entities:  

Keywords:  Fatty acid biosynthesis; Neutral loss; Neutral loss-triggered MS3; Oil palm; Phosphorylation; Selected reaction monitoring

Mesh:

Substances:

Year:  2016        PMID: 26993480     DOI: 10.1007/s10930-016-9655-0

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  16 in total

1.  PROSITE: a documented database using patterns and profiles as motif descriptors.

Authors:  Christian J A Sigrist; Lorenzo Cerutti; Nicolas Hulo; Alexandre Gattiker; Laurent Falquet; Marco Pagni; Amos Bairoch; Philipp Bucher
Journal:  Brief Bioinform       Date:  2002-09       Impact factor: 11.622

Review 2.  Shotguns in the front line: phosphoproteomics in plants.

Authors:  Hirofumi Nakagami; Naoyuki Sugiyama; Yasushi Ishihama; Ken Shirasu
Journal:  Plant Cell Physiol       Date:  2011-10-28       Impact factor: 4.927

3.  Modification of Brassica seed oil by antisense expression of a stearoyl-acyl carrier protein desaturase gene.

Authors:  D S Knutzon; G A Thompson; S E Radke; W B Johnson; V C Knauf; J C Kridl
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-01       Impact factor: 11.205

Review 4.  Regulation of fatty acid synthesis and oxidation by the AMP-activated protein kinase.

Authors:  D G Hardie; D A Pan
Journal:  Biochem Soc Trans       Date:  2002-11       Impact factor: 5.407

5.  Human acetyl-CoA carboxylase 2 expressed in silkworm Bombyx mori exhibits posttranslational biotinylation and phosphorylation.

Authors:  In-Wook Hwang; Yu Makishima; Tatsuya Kato; Sungjo Park; Andre Terzic; Enoch Y Park
Journal:  Appl Microbiol Biotechnol       Date:  2014-04-17       Impact factor: 4.813

Review 6.  Regulation of acetyl-CoA carboxylase.

Authors:  R W Brownsey; A N Boone; J E Elliott; J E Kulpa; W M Lee
Journal:  Biochem Soc Trans       Date:  2006-04       Impact factor: 5.407

7.  Expression of a coriander desaturase results in petroselinic acid production in transgenic tobacco.

Authors:  E B Cahoon; J Shanklin; J B Ohlrogge
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

8.  Proteomic analysis of the oil palm fruit mesocarp reveals elevated oxidative phosphorylation activity is critical for increased storage oil production.

Authors:  Hendrick Loei; Justin Lim; Melvin Tan; Teck Kwang Lim; Qing Song Lin; Fook Tim Chew; Harikrishna Kulaveerasingam; Maxey C M Chung
Journal:  J Proteome Res       Date:  2013-10-07       Impact factor: 4.466

9.  KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns.

Authors:  Yung-Hao Wong; Tzong-Yi Lee; Han-Kuen Liang; Chia-Mao Huang; Ting-Yuan Wang; Yi-Huan Yang; Chia-Huei Chu; Hsien-Da Huang; Ming-Tat Ko; Jenn-Kang Hwang
Journal:  Nucleic Acids Res       Date:  2007-05-21       Impact factor: 16.971

10.  The InterPro protein families database: the classification resource after 15 years.

Authors:  Alex Mitchell; Hsin-Yu Chang; Louise Daugherty; Matthew Fraser; Sarah Hunter; Rodrigo Lopez; Craig McAnulla; Conor McMenamin; Gift Nuka; Sebastien Pesseat; Amaia Sangrador-Vegas; Maxim Scheremetjew; Claudia Rato; Siew-Yit Yong; Alex Bateman; Marco Punta; Teresa K Attwood; Christian J A Sigrist; Nicole Redaschi; Catherine Rivoire; Ioannis Xenarios; Daniel Kahn; Dominique Guyot; Peer Bork; Ivica Letunic; Julian Gough; Matt Oates; Daniel Haft; Hongzhan Huang; Darren A Natale; Cathy H Wu; Christine Orengo; Ian Sillitoe; Huaiyu Mi; Paul D Thomas; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2014-11-26       Impact factor: 16.971

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  4 in total

Review 1.  Application of Proteomics Technologies in Oil Palm Research.

Authors:  Benjamin Yii Chung Lau; Abrizah Othman; Umi Salamah Ramli
Journal:  Protein J       Date:  2018-12       Impact factor: 2.371

2.  Evaluation of sodium deoxycholate as solubilization buffer for oil palm proteomics analysis.

Authors:  Benjamin Yii Chung Lau; Abrizah Othman
Journal:  PLoS One       Date:  2019-08-15       Impact factor: 3.240

3.  Proteomics analysis on lipid metabolism in Elaeis guineensis and Elaeis oleifera.

Authors:  Benjamin Yii Chung Lau; Mohd Din Amiruddin; Abrizah Othman
Journal:  Data Brief       Date:  2020-05-16

4.  Transcriptomic and proteomic profiling revealed reprogramming of carbon metabolism in acetate-grown human pathogen Candida glabrata.

Authors:  Shu Yih Chew; Alistair J P Brown; Benjamin Yii Chung Lau; Yoke Kqueen Cheah; Kok Lian Ho; Doblin Sandai; Hassan Yahaya; Leslie Thian Lung Than
Journal:  J Biomed Sci       Date:  2021-01-02       Impact factor: 8.410

  4 in total

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