Literature DB >> 26981695

Genomic Organization Under Different Environmental Conditions: Hoplosternum Littorale as a Model.

Francijara Araújo da Silva1, Carlos Henrique Schneider1, Eliana Feldberg2, Fabricio Beggiato Baccaro3, Natália Dayane Moura Carvalho1, Maria Claudia Gross1.   

Abstract

The Amazon has abundant rivers, streams, and floodplains in both polluted and nonpolluted environments, which show great adaptability. Thus, the goal of this study was to map repetitive DNA sequences in both mitotic chromosomes and erythrocyte micronuclei of tamoatás from polluted and nonpolluted environments and to assess the possible genotoxic effects of these environments. Individuals were collected in Manaus, Amazonas (AM), and submitted to classical and molecular cytogenetic techniques, as well as to a blood micronucleus test. Diploid number equal to 60 chromosomes are present in all individuals, with 18S ribosomal DNA sites present in one chromosome pair and no interstitial telomeric sites on chromosomes. The micronucleus test showed no significant differences in pairwise comparisons between environments or collection sites, but the Rex3 retroelement was dispersed on the chromosomes of individuals from unpolluted environments and compartmentalized in individuals from polluted environments. Divergent numbers of 5S rDNA sites are present in individuals from unpolluted and polluted environments. The mapping of repetitive sequences revealed that micronuclei have different compositions both intra- and interindividually that suggests different regions are lost in the formation of micronuclei, and no single fragile region undergoes breaks, although repetitive DNA elements are involved in this process.

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Year:  2016        PMID: 26981695      PMCID: PMC4892195          DOI: 10.1089/zeb.2015.1237

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  35 in total

1.  The Organization of Repetitive DNA in the Genomes of Amazonian Lizard Species in the Family Teiidae.

Authors:  Natalia D M Carvalho; Vanessa S S Pinheiro; Edson J Carmo; Leonardo G Goll; Carlos H Schneider; Maria C Gross
Journal:  Cytogenet Genome Res       Date:  2016-02-12       Impact factor: 1.636

2.  [Use of bioindicators for assessing and monitoring pesticides contamination in streams and rivers].

Authors:  Ana Rosa Linde Arias; Daniel Forsin Buss; Carla de Alburquerque; Alan Ferreira Inácio; Marina Moreira Freire; Mariana Egler; Riccardo Mugnai; Darcilio Fernandes Baptista
Journal:  Cien Saude Colet       Date:  2007 Jan-Mar

3.  Heavy metal content and mutagenic activity, evaluated by Vicia faba micronucleus test, of Tiber river sediments.

Authors:  S Minissi; E Lombi
Journal:  Mutat Res       Date:  1997-09-18       Impact factor: 2.433

4.  Controlled silver-staining of nucleolus organizer regions with a protective colloidal developer: a 1-step method.

Authors:  W M Howell; D A Black
Journal:  Experientia       Date:  1980-08-15

5.  Comparative cytogenetic analysis of the genus symphysodon (discus fishes, cichlidae): chromosomal characteristics of retrotransposons and minor ribosomal DNA.

Authors:  M C Gross; C H Schneider; G T Valente; J I R Porto; C Martins; E Feldberg
Journal:  Cytogenet Genome Res       Date:  2010-01-29       Impact factor: 1.636

6.  Variability of 18S rDNA locus among Symphysodon fishes: chromosomal rearrangements.

Authors:  M C Gross; C H Schneider; G T Valente; C Martins; E Feldberg
Journal:  J Fish Biol       Date:  2010-04       Impact factor: 2.051

Review 7.  Mobile elements and mammalian genome evolution.

Authors:  Prescott L Deininger; John V Moran; Mark A Batzer; Haig H Kazazian
Journal:  Curr Opin Genet Dev       Date:  2003-12       Impact factor: 5.578

8.  HUMN project: detailed description of the scoring criteria for the cytokinesis-block micronucleus assay using isolated human lymphocyte cultures.

Authors:  M Fenech; W P Chang; M Kirsch-Volders; N Holland; S Bonassi; E Zeiger
Journal:  Mutat Res       Date:  2003-01-10       Impact factor: 2.433

9.  FISH in analysis of gamma ray-induced micronuclei formation in barley.

Authors:  Jolanta Juchimiuk-Kwasniewska; Lidia Brodziak; Jolanta Maluszynska
Journal:  J Appl Genet       Date:  2010-12-07       Impact factor: 3.240

10.  Micronuclei in genotoxicity assessment: from genetics to epigenetics and beyond.

Authors:  Lidiya Luzhna; Palak Kathiria; Olga Kovalchuk
Journal:  Front Genet       Date:  2013-07-11       Impact factor: 4.599

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  1 in total

1.  A Perspective of Molecular Cytogenomics, Toxicology, and Epigenetics for the Increase of Heterochromatic Regions and Retrotransposable Elements in Tambaqui (Colossoma macropomum) Exposed to the Parasiticide Trichlorfon.

Authors:  Maria Dos Santos Costa; Hallana Cristina Menezes da Silva; Simone Cardoso Soares; Ramon Marin Favarato; Eliana Feldberg; Ana Lúcia Silva Gomes; Roberto Ferreira Artoni; Daniele Aparecida Matoso
Journal:  Animals (Basel)       Date:  2022-07-31       Impact factor: 3.231

  1 in total

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