Literature DB >> 26981203

Regulation of RNA binding proteins in trypanosomatid protozoan parasites.

María Albertina Romaniuk1, Gabriela Cervini1, Alejandro Cassola1.   

Abstract

Posttranscriptional mechanisms have a critical role in the overall outcome of gene expression. These mechanisms are especially relevant in protozoa from the genus Trypanosoma, which is composed by death threatening parasites affecting people in Sub-saharan Africa or in the Americas. In these parasites the classic view of regulation of transcription initiation to modulate the products of a given gene cannot be applied. This is due to the presence of transcription start sites that give rise to long polycistronic units that need to be processed costranscriptionally by trans-splicing and polyadenylation to give mature monocistronic mRNAs. Posttranscriptional mechanisms such as mRNA degradation and translational repression are responsible for the final synthesis of the required protein products. In this context, RNA-binding proteins (RBPs) in trypanosomes have a relevant role as modulators of mRNA abundance and translational repression by associating to the 3' untranslated regions in mRNA. Many different RBPs have been proposed to modulate cohorts of mRNAs in trypanosomes. However, the current understanding of their functions lacks a dynamic view on the different steps at which these RBPs are regulated. Here, we discuss different evidences to propose regulatory events for different RBPs in these parasites. These events vary from regulated developmental expression, to biogenesis of cytoplasmic ribonucleoprotein complexes in the nucleus, and condensation of RBPs and mRNA into large cytoplasmic granules. Finally, we discuss how newly identified posttranslational modifications of RBPs and mRNA metabolism-related proteins could have an enormous impact on the modulation of mRNA abundance. To understand these modifications is especially relevant in these parasites due to the fact that the enzymes involved could be interesting targets for drug therapy.

Entities:  

Keywords:  Chagas disease; Developmental regulation; Phosphorylation; Posttranscriptional gene expression; Posttranslational modification; RNA-binding protein; Ribonucleoprotein complexes; Sleeping sickness; Trypanosoma

Year:  2016        PMID: 26981203      PMCID: PMC4768119          DOI: 10.4331/wjbc.v7.i1.146

Source DB:  PubMed          Journal:  World J Biol Chem        ISSN: 1949-8454


  85 in total

Review 1.  Getting RNA and protein in phase.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

2.  Cell biology: SUMO.

Authors:  Erik Meulmeester; Frauke Melchior
Journal:  Nature       Date:  2008-04-10       Impact factor: 49.962

3.  The Trypanosoma brucei CCCH zinc finger proteins ZC3H12 and ZC3H13.

Authors:  Benard Aswani Ouna; Mhairi Stewart; Claudia Helbig; Christine Clayton
Journal:  Mol Biochem Parasitol       Date:  2012-02-17       Impact factor: 1.759

4.  Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA.

Authors:  Dilrukshi K Ekanayake; Todd Minning; Brent Weatherly; Kapila Gunasekera; Daniel Nilsson; Rick Tarleton; Torsten Ochsenreiter; Robert Sabatini
Journal:  Mol Cell Biol       Date:  2011-02-14       Impact factor: 4.272

5.  Species specificity in ribosome biogenesis: a nonconserved phosphoprotein is required for formation of the large ribosomal subunit in Trypanosoma brucei.

Authors:  Bryan C Jensen; Deirdre L Brekken; Amber C Randall; Charles T Kifer; Marilyn Parsons
Journal:  Eukaryot Cell       Date:  2005-01

6.  Trypanosoma cruzi: molecular characterization of an RNA binding protein differentially expressed in the parasite life cycle.

Authors:  Leticia Pérez-Díaz; María Ana Duhagon; Pablo Smircich; José Sotelo-Silveira; Carlos Robello; Marco Aurelio Krieger; Samuel Goldenberg; Noreen Williams; Bruno Dallagiovanna; Beatriz Garat
Journal:  Exp Parasitol       Date:  2007-03-27       Impact factor: 2.011

7.  Developmental progression to infectivity in Trypanosoma brucei triggered by an RNA-binding protein.

Authors:  Nikolay G Kolev; Kiantra Ramey-Butler; George A M Cross; Elisabetta Ullu; Christian Tschudi
Journal:  Science       Date:  2012-12-07       Impact factor: 47.728

Review 8.  Protein arginine methylation in mammals: who, what, and why.

Authors:  Mark T Bedford; Steven G Clarke
Journal:  Mol Cell       Date:  2009-01-16       Impact factor: 17.970

9.  Import of proteins into the trypanosome nucleus and their distribution at karyokinesis.

Authors:  M A Marchetti; C Tschudi; H Kwon; S L Wolin; E Ullu
Journal:  J Cell Sci       Date:  2000-03       Impact factor: 5.285

Review 10.  The role of disordered protein regions in the assembly of decapping complexes and RNP granules.

Authors:  Stefanie Jonas; Elisa Izaurralde
Journal:  Genes Dev       Date:  2013-12-15       Impact factor: 11.361

View more
  11 in total

1.  The Trypanosoma cruzi RNA-binding protein RBP42 is expressed in the cytoplasm throughout the life cycle of the parasite.

Authors:  R Tyler Weisbarth; Anish Das; Paul Castellano; Michael A Fisher; Han Wu; Vivian Bellofatto
Journal:  Parasitol Res       Date:  2018-02-23       Impact factor: 2.289

Review 2.  The Role of Cytoplasmic mRNA Cap-Binding Protein Complexes in Trypanosoma brucei and Other Trypanosomatids.

Authors:  Eden R Freire; Nancy R Sturm; David A Campbell; Osvaldo P de Melo Neto
Journal:  Pathogens       Date:  2017-10-27

Review 3.  High-throughput Methods for Dissection of Trypanosome Gene Regulatory Networks.

Authors:  Esteban D Erben
Journal:  Curr Genomics       Date:  2018-02       Impact factor: 2.236

4.  Trypanosoma cruzi XRNA granules colocalise with distinct mRNP granules at the nuclear periphery.

Authors:  Jimena Ferreira da Costa; Mariana Galvão Ferrarini; Sheila Cristina Nardelli; Samuel Goldenberg; Andréa Rodrigues Ávila; Fabíola Barbieri Holetz
Journal:  Mem Inst Oswaldo Cruz       Date:  2018-06-18       Impact factor: 2.743

5.  Complete assembly of the Leishmania donovani (HU3 strain) genome and transcriptome annotation.

Authors:  Esther Camacho; Sandra González-de la Fuente; Alberto Rastrojo; Ramón Peiró-Pastor; Jose Carlos Solana; Laura Tabera; Francisco Gamarro; Fernando Carrasco-Ramiro; Jose M Requena; Begoña Aguado
Journal:  Sci Rep       Date:  2019-04-16       Impact factor: 4.379

Review 6.  Redox Balance Keepers and Possible Cell Functions Managed by Redox Homeostasis in Trypanosoma cruzi.

Authors:  Andrea C Mesías; Nisha J Garg; M Paola Zago
Journal:  Front Cell Infect Microbiol       Date:  2019-12-20       Impact factor: 5.293

7.  In Silico Identification of New Targets for Diagnosis, Vaccine, and Drug Candidates against Trypanosoma cruzi.

Authors:  Rafael Obata Trevisan; Malú Mateus Santos; Chamberttan Souza Desidério; Leandro Gomes Alves; Thiago de Jesus Sousa; Letícia de Castro Oliveira; Arun Kumar Jaiswal; Sandeep Tiwari; Weslley Guimarães Bovi; Mariana de Oliveira-Silva; Juliana Cristina Costa-Madeira; Lúcio Roberto Cançado Castellano; Marcos Vinicius Silva; Vasco Azevedo; Virmondes Rodrigues Junior; Carlo José Freire Oliveira; Siomar de Castro Soares
Journal:  Dis Markers       Date:  2020-12-10       Impact factor: 3.434

8.  Identification of novel proteins and mRNAs differentially bound to the Leishmania Poly(A) Binding Proteins reveals a direct association between PABP1, the RNA-binding protein RBP23 and mRNAs encoding ribosomal proteins.

Authors:  Ludmila A Assis; Moezio V C Santos Filho; Joao R da Cruz Silva; Maria J R Bezerra; Irassandra R P U C de Aquino; Kleison C Merlo; Fabiola B Holetz; Christian M Probst; Antonio M Rezende; Barbara Papadopoulou; Tamara D C da Costa Lima; Osvaldo P de Melo Neto
Journal:  PLoS Negl Trop Dis       Date:  2021-10-27

9.  Translational repression by an RNA-binding protein promotes differentiation to infective forms in Trypanosoma cruzi.

Authors:  Maria Albertina Romaniuk; Alberto Carlos Frasch; Alejandro Cassola
Journal:  PLoS Pathog       Date:  2018-06-04       Impact factor: 6.823

10.  Single-cell RNA sequencing of Trypanosoma brucei from tsetse salivary glands unveils metacyclogenesis and identifies potential transmission blocking antigens.

Authors:  Aurélien Vigneron; Michelle B O'Neill; Brian L Weiss; Amy F Savage; Olivia C Campbell; Shaden Kamhawi; Jesus G Valenzuela; Serap Aksoy
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-21       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.