| Literature DB >> 26979325 |
Ann John1,2, Joanne McGregor3, David Fone4,5, Frank Dunstan5, Rosie Cornish6, Ronan A Lyons3,4, Keith R Lloyd3.
Abstract
BACKGROUND: The robustness of epidemiological research using routinely collected primary care electronic data to support policy and practice for common mental disorders (CMD) anxiety and depression would be greatly enhanced by appropriate validation of diagnostic codes and algorithms for data extraction. We aimed to create a robust research platform for CMD using population-based, routinely collected primary care electronic data.Entities:
Keywords: Anxiety; Depression; Electronic health records; Validation
Mesh:
Year: 2016 PMID: 26979325 PMCID: PMC4791907 DOI: 10.1186/s12911-016-0274-7
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 2.796
Fig. 1Split file approach to linking survey data to primary care data
Sensitivity, specificity, positive predictive value-results comparing GP Read codes for anxiety and depression diagnoses, symptoms and treatment with MHI-5 data (as the gold standard) from the CHSNS waves
| Algorithm: CMD diagnosis/symptom/treatment | Wave (W) | True Positivesa | True negativesb | Sensitivity | Specificity | Positive Predictive value | Number of cases identified by algorithm n (prevalence, %)–includes false positives W1, |
|---|---|---|---|---|---|---|---|
| 1. Current treatment only | W1 | 268 | 1590 | 0.33 | 0.90 | 0.61 | 438 (17.0) |
| W2 | 189 | 712 | 0.48 | 0.89 | 0.68 | 277 (23.2) | |
| 2. Current diagnosis (treated or untreated) | W1 | 50 | 1737 | 0.06 | 0.99 | 0.68 | 73 (2.8) |
| W2 | 20 | 792 | 0.05 | 0.99 | 0.71 | 28 (2.3) | |
| 3. Current diagnosis treated | W1 | 48 | 1742 | 0.06 | 0.99 | 0.73 | 66 (2.6) |
| W2 | 18 | 793 | 0.05 | 0.99 | 0.72 | 25 (2.1) | |
| 4. Current diagnosis or symptom (treated or untreated) | W1 | 57 | 1733 | 0.07 | 0.99 | 0.68 | 84 (3.3) |
| W2 | 37 | 783 | 0.09 | 0.98 | 0.69 | 54 (4.5) | |
| 5. Current diagnosis or symptom (treated only) | W1 | 53 | 1738 | 0.06 | 0.99 | 0.71 | 75 (2.9) |
| W2 | 32 | 785 | 0.08 | 0.98 | 0.68 | 47 (3.9) | |
| 6. Current treatment plus untreated current diagnosis or symptom | W1 | 272 | 1585 | 0.33 | 0.90 | 0.61 | 447 (17.3) |
| W2 | 194 | 710 | 0.49 | 0.89 | 0.68 | 284 (23.8) | |
| 7. Historical or current diagnosis currently treated | W1 | 121 | 1697 | 0.15 | 0.96 | 0.66 | 184 (7.1) |
| W2 | 113 | 765 | 0.29 | 0.96 | 0.76 | 148 (12.4) | |
| 8. Historical or current diagnosis or symptom currently treated | W1 | 131 | 1693 | 0.16 | 0.96 | 0.67 | 198 (7.7) |
| W2 | 138 | 750 | 0.35 | 0.94 | 0.73 | 188 (15.7) | |
| 9. Historical diagnosis currently treated plus current diagnosis (treated or untreated) | W1 | 123 | 1692 | 0.15 | 0.96 | 0.64 | 191 (7.4) |
| W2 | 115 | 764 | 0.29 | 0.96 | 0.76 | 151 (12.6) | |
| 10. Historical diagnosis currently treated plus current diagnosis or symptom (treated or untreated) | W1 | 127 | 1691 | 0.16 | 0.96 | 0.65 | 196 (7.6) |
| W2 | 126 | 756 | 0.32 | 0.95 | 0.74 | 170 (14.2) | |
| 11. Historical or current diagnosis or symptom currently treated plus current diagnosis untreated | W1 | 133 | 1688 | 0.16 | 0.96 | 0.65 | 205 (7.9) |
| W2 | 140 | 749 | 0.35 | 0.94 | 0.73 | 191 (16.0) | |
| 12. Historical or current diagnosis or symptom currently treated plus current diagnosis or symptom untreated | W1 | 135 | 1688 | 0.17 | 0.96 | 0.65 | 207 (8.0) |
| W2 | 143 | 748 | 0.36 | 0.94 | 0.73 | 195 (16.3) |
aNumber identified with CMD using MHI-5 data at Wave 1 = 824, at Wave 2 = 395
bNumber identified as not having CMD at Wave 1 = 1760, at Wave 2 = 800
Incidence of GP recorded depression/anxiety broken down by diagnoses and symptoms in the SAIL databank 2000–2010 per 1000 person-years at risk (PYAR)
| Year | Diagnosis recorded (Depression & Anxiety) | Symptom recorded (Depression & Anxiety) | Either Diagnosis or symptom recorded |
|---|---|---|---|
| 2000 | 20.3 | 6.5 | 24.4 |
| 2001 | 23.1 | 6.8 | 27.3 |
| 2002 | 25.3 | 9.6 | 31.2 |
| 2003 | 26.0 | 12.7 | 34.0 |
| 2004 | 25.5 | 16.6 | 36.7 |
| 2005 | 24.7 | 17.9 | 37.0 |
| 2006 | 26.1 | 20.3 | 39.7 |
| 2007 | 21.6 | 20.1 | 35.6 |
| 2008 | 20.4 | 19.0 | 33.8 |
| 2009 | 20.0 | 20.7 | 34.9 |
Fig. 2Trends in the incidence of GP recorded anxiety and depression (2000–2010)
False positives and false negatives for Algorithm 9
| MHI-5 CMD case | MHI-5 no CMD | Totals | |
|---|---|---|---|
| GPD case | 115 | 36 | 151 |
| GPD no CMD | 280 | 764 | 1044 |
| Totals | 395 | 800 | 1195 |