| Literature DB >> 26977352 |
Clarence Yapp1, Catherine Rogers2, Pavel Savitsky3, Martin Philpott4, Susanne Müller2.
Abstract
Fluorescence Recovery After Photobleaching (FRAP) is an established method for validating chemical probes against the chromatin reading bromodomains, but so far requires constant human supervision. Here, we present Frapid, an automated open source code implementation of FRAP that fully handles cell identification through fuzzy logic analysis, drug dispensing with a custom-built fluid handler, image acquisition & analysis, and reporting. We successfully tested Frapid on 3 bromodomains as well as on spindlin1 (SPIN1), a methyl lysine binder, for the first time.Entities:
Keywords: (100.3008) Image recognition, algorithms and filters; (150.0150) Machine vision; (150.5758) Robotic and machine control; (170.1530) Cell analysis; (170.1790) Confocal microscopy; (170.2520) Fluorescence microscopy
Year: 2016 PMID: 26977352 PMCID: PMC4771461 DOI: 10.1364/BOE.7.000422
Source DB: PubMed Journal: Biomed Opt Express ISSN: 2156-7085 Impact factor: 3.732