Literature DB >> 26975438

Validation of a Three-Dimensional Method for Counting and Sizing Podocytes in Whole Glomeruli.

Victor G Puelles1, James W van der Wolde2, Keith E Schulze3, Kieran M Short4, Milagros N Wong2, Jonathan G Bensley2, Luise A Cullen-McEwen2, Georgina Caruana2, Stacey N Hokke2, Jinhua Li2, Stephen D Firth3, Ian S Harper3, David J Nikolic-Paterson5, John F Bertram2.   

Abstract

Podocyte depletion is sufficient for the development of numerous glomerular diseases and can be absolute (loss of podocytes) or relative (reduced number of podocytes per volume of glomerulus). Commonly used methods to quantify podocyte depletion introduce bias, whereas gold standard stereologic methodologies are time consuming and impractical. We developed a novel approach for assessing podocyte depletion in whole glomeruli that combines immunofluorescence, optical clearing, confocal microscopy, and three-dimensional analysis. We validated this method in a transgenic mouse model of selective podocyte depletion, in which we determined dose-dependent alterations in several quantitative indices of podocyte depletion. This new approach provides a quantitative tool for the comprehensive and time-efficient analysis of podocyte depletion in whole glomeruli.
Copyright © 2016 by the American Society of Nephrology.

Entities:  

Keywords:  glomerular disease; podocyte; renal morphology

Mesh:

Year:  2016        PMID: 26975438      PMCID: PMC5042676          DOI: 10.1681/ASN.2015121340

Source DB:  PubMed          Journal:  J Am Soc Nephrol        ISSN: 1046-6673            Impact factor:   10.121


  47 in total

1.  Podocyte number in normotensive type 1 diabetic patients with albuminuria.

Authors:  Kathryn E White; Rudolf W Bilous; Sally M Marshall; Meguid El Nahas; Giuseppe Remuzzi; Giampiero Piras; Salvatore De Cosmo; GianCarlo Viberti
Journal:  Diabetes       Date:  2002-10       Impact factor: 9.461

2.  Estimation of podocyte number: a comparison of methods.

Authors:  Kathryn Elizabeth White; Rudolf William Bilous
Journal:  Kidney Int       Date:  2004-08       Impact factor: 10.612

3.  Analysis of native kidney structures in three dimensions.

Authors:  Kieran M Short; Ian M Smyth
Journal:  Methods Mol Biol       Date:  2012

4.  Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging.

Authors:  Etsuo A Susaki; Kazuki Tainaka; Dimitri Perrin; Hiroko Yukinaga; Akihiro Kuno; Hiroki R Ueda
Journal:  Nat Protoc       Date:  2015-10-08       Impact factor: 13.491

5.  Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.

Authors:  Hiroshi Hama; Hiroshi Kurokawa; Hiroyuki Kawano; Ryoko Ando; Tomomi Shimogori; Hisayori Noda; Kiyoko Fukami; Asako Sakaue-Sawano; Atsushi Miyawaki
Journal:  Nat Neurosci       Date:  2011-08-30       Impact factor: 24.884

6.  Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.

Authors:  Hans-Ulrich Dodt; Ulrich Leischner; Anja Schierloh; Nina Jährling; Christoph Peter Mauch; Katrin Deininger; Jan Michael Deussing; Matthias Eder; Walter Zieglgänsberger; Klaus Becker
Journal:  Nat Methods       Date:  2007-03-25       Impact factor: 28.547

Review 7.  Counting glomeruli and podocytes: rationale and methodologies.

Authors:  Victor G Puelles; John F Bertram
Journal:  Curr Opin Nephrol Hypertens       Date:  2015-05       Impact factor: 2.894

8.  Single-cell phenotyping within transparent intact tissue through whole-body clearing.

Authors:  Bin Yang; Jennifer B Treweek; Rajan P Kulkarni; Benjamin E Deverman; Chun-Kan Chen; Eric Lubeck; Sheel Shah; Long Cai; Viviana Gradinaru
Journal:  Cell       Date:  2014-07-31       Impact factor: 41.582

9.  Human podocyte depletion in association with older age and hypertension.

Authors:  Victor G Puelles; Luise A Cullen-McEwen; Georgina E Taylor; Jinhua Li; Michael D Hughson; Peter G Kerr; Wendy E Hoy; John F Bertram
Journal:  Am J Physiol Renal Physiol       Date:  2016-01-20

10.  Cells of renin lineage are progenitors of podocytes and parietal epithelial cells in experimental glomerular disease.

Authors:  Jeffrey W Pippin; Matthew A Sparks; Sean T Glenn; Sandra Buitrago; Thomas M Coffman; Jeremy S Duffield; Kenneth W Gross; Stuart J Shankland
Journal:  Am J Pathol       Date:  2013-06-14       Impact factor: 4.307

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  21 in total

1.  Podocyte Growing Pains in Adaptive FSGS.

Authors:  Vivette D D'Agati
Journal:  J Am Soc Nephrol       Date:  2017-07-17       Impact factor: 10.121

2.  mTOR-mediated podocyte hypertrophy regulates glomerular integrity in mice and humans.

Authors:  Victor G Puelles; James W van der Wolde; Nicola Wanner; Markus W Scheppach; Luise A Cullen-McEwen; Tillmann Bork; Maja T Lindenmeyer; Lukas Gernhold; Milagros N Wong; Fabian Braun; Clemens D Cohen; Michelle M Kett; Christoph Kuppe; Rafael Kramann; Turgay Saritas; Claudia R van Roeyen; Marcus J Moeller; Leon Tribolet; Richard Rebello; Yu By Sun; Jinhua Li; Gerhard Müller-Newen; Michael D Hughson; Wendy E Hoy; Fermin Person; Thorsten Wiech; Sharon D Ricardo; Peter G Kerr; Kate M Denton; Luc Furic; Tobias B Huber; David J Nikolic-Paterson; John F Bertram
Journal:  JCI Insight       Date:  2019-09-19

3.  LRG1 Promotes Diabetic Kidney Disease Progression by Enhancing TGF-β-Induced Angiogenesis.

Authors:  Quan Hong; Lu Zhang; Jia Fu; Divya A Verghese; Kinsuk Chauhan; Girish N Nadkarni; Zhengzhe Li; Wenjun Ju; Matthias Kretzler; Guang-Yan Cai; Xiang-Mei Chen; Vivette D D'Agati; Steven G Coca; Detlef Schlondorff; John C He; Kyung Lee
Journal:  J Am Soc Nephrol       Date:  2019-03-11       Impact factor: 10.121

4.  Representation and relative abundance of cell-type selective markers in whole-kidney RNA-Seq data.

Authors:  Jevin Z Clark; Lihe Chen; Chung-Lin Chou; Hyun Jun Jung; Jae Wook Lee; Mark A Knepper
Journal:  Kidney Int       Date:  2019-02-27       Impact factor: 10.612

Review 5.  Can podocytes be regenerated in adults?

Authors:  Stuart J Shankland; Benjamin S Freedman; Jeffrey W Pippin
Journal:  Curr Opin Nephrol Hypertens       Date:  2017-05       Impact factor: 2.894

Review 6.  Nephrons, podocytes and chronic kidney disease: Strategic antihypertensive therapy for renoprotection.

Authors:  Kotaro Haruhara; Go Kanzaki; Nobuo Tsuboi
Journal:  Hypertens Res       Date:  2022-10-12       Impact factor: 5.528

7.  Inhibition of apoptosis signal-regulating kinase 1 mitigates the pathogenesis of human immunodeficiency virus-associated nephropathy.

Authors:  Anqun Chen; Jin Xu; Han Lai; Vivette D D'Agati; Tian-Jun Guan; Shawn Badal; John Liles; John C He; Kyung Lee
Journal:  Nephrol Dial Transplant       Date:  2021-02-20       Impact factor: 5.992

8.  Novel fluorescence techniques to quantitate renal cell biology.

Authors:  Urvi Nikhil Shroff; Ina Maria Schiessl; Georgina Gyarmati; Anne Riquier-Brison; Janos Peti-Peterdi
Journal:  Methods Cell Biol       Date:  2019-05-17       Impact factor: 1.441

9.  Partial podocyte replenishment in experimental FSGS derives from nonpodocyte sources.

Authors:  Natalya V Kaverina; Diana G Eng; Remington R S Schneider; Jeffrey W Pippin; Stuart J Shankland
Journal:  Am J Physiol Renal Physiol       Date:  2016-04-13

10.  Podometrics in Japanese Living Donor Kidneys: Associations with Nephron Number, Age, and Hypertension.

Authors:  Kotaro Haruhara; Takaya Sasaki; Natasha de Zoysa; Yusuke Okabayashi; Go Kanzaki; Izumi Yamamoto; Ian S Harper; Victor G Puelles; Akira Shimizu; Luise A Cullen-McEwen; Nobuo Tsuboi; Takashi Yokoo; John F Bertram
Journal:  J Am Soc Nephrol       Date:  2021-02-24       Impact factor: 10.121

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