Literature DB >> 26972873

Giant viruses: The difficult breaking of multiple epistemological barriers.

Jean-Michel Claverie1, Chantal Abergel2.   

Abstract

The discovery of the first "giant virus", Mimivirus, in 2003 could solely have been that of an exceptional freak, a blind alley of evolution as occasionally encountered in biology, albeit without conceptual significance. On the contrary, once broken this epistemological barrier, additional unrelated families of giant viruses such as the Pandoraviruses, the Pithoviruses and most recently Mollivirus, were quickly unraveled, suggesting that an entire chapter of microbiology had been ignored since Pasteur and Ivanovski. In this article, we examine to what extent the giant viruses challenge previous definitions of viruses, the diversity of forms they could take, and how they might have evolved from extinct ancestral cellular lineages. Inspired by the epistemology of Gaston Bachelard, we will also suggest the reasons for which giant viruses laid hidden in plain sight for more than a century. Finally, we propose a new definition for "viruses" that paradoxically emphasize the fact that they do not encode a single universally shared macromolecule or biochemical function.
Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  Bachelard; Epistemological obstacles; Reductive evolution; Virus definition; Virus origin

Mesh:

Year:  2016        PMID: 26972873     DOI: 10.1016/j.shpsc.2016.02.015

Source DB:  PubMed          Journal:  Stud Hist Philos Biol Biomed Sci        ISSN: 1369-8486


  26 in total

1.  Bacterial Origin and Reductive Evolution of the CPR Group.

Authors:  Rijja Hussain Bokhari; Nooreen Amirjan; Hyeonsoo Jeong; Kyung Mo Kim; Gustavo Caetano-Anollés; Arshan Nasir
Journal:  Genome Biol Evol       Date:  2020-03-01       Impact factor: 3.416

2.  Diversification of giant and large eukaryotic dsDNA viruses predated the origin of modern eukaryotes.

Authors:  Julien Guglielmini; Anthony C Woo; Mart Krupovic; Patrick Forterre; Morgan Gaia
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-10       Impact factor: 11.205

Review 3.  Insuperable problems of the genetic code initially emerging in an RNA world.

Authors:  Peter R Wills; Charles W Carter
Journal:  Biosystems       Date:  2017-09-10       Impact factor: 1.973

Review 4.  Standing on the Shoulders of Giant Viruses: Five Lessons Learned about Large Viruses Infecting Small Eukaryotes and the Opportunities They Create.

Authors:  Steven W Wilhelm; Samantha R Coy; Eric R Gann; Mohammad Moniruzzaman; Joshua M A Stough
Journal:  PLoS Pathog       Date:  2016-08-25       Impact factor: 6.823

5.  Phylogenetic Tracings of Proteome Size Support the Gradual Accretion of Protein Structural Domains and the Early Origin of Viruses from Primordial Cells.

Authors:  Arshan Nasir; Kyung Mo Kim; Gustavo Caetano-Anollés
Journal:  Front Microbiol       Date:  2017-06-23       Impact factor: 5.640

Review 6.  What macromolecular crystallogenesis tells us - what is needed in the future.

Authors:  Richard Giegé
Journal:  IUCrJ       Date:  2017-05-24       Impact factor: 4.769

7.  A Preliminary List of Horizontally Transferred Genes in Prokaryotes Determined by Tree Reconstruction and Reconciliation.

Authors:  Hyeonsoo Jeong; Arshan Nasir
Journal:  Front Genet       Date:  2017-08-28       Impact factor: 4.599

8.  Diversity and evolution of the emerging Pandoraviridae family.

Authors:  Matthieu Legendre; Elisabeth Fabre; Olivier Poirot; Sandra Jeudy; Audrey Lartigue; Jean-Marie Alempic; Laure Beucher; Nadège Philippe; Lionel Bertaux; Eugène Christo-Foroux; Karine Labadie; Yohann Couté; Chantal Abergel; Jean-Michel Claverie
Journal:  Nat Commun       Date:  2018-06-11       Impact factor: 14.919

9.  Do Viruses Exchange Genes across Superkingdoms of Life?

Authors:  Shahana S Malik; Syeda Azem-E-Zahra; Kyung Mo Kim; Gustavo Caetano-Anollés; Arshan Nasir
Journal:  Front Microbiol       Date:  2017-10-31       Impact factor: 5.640

Review 10.  The origin and evolution of viruses inferred from fold family structure.

Authors:  Fizza Mughal; Arshan Nasir; Gustavo Caetano-Anollés
Journal:  Arch Virol       Date:  2020-08-03       Impact factor: 2.574

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