Literature DB >> 26963609

Non-Euclidean classification of medically imaged objects via s-reps.

Junpyo Hong1, Jared Vicory2, Jörn Schulz3, Martin Styner4, J S Marron5, Stephen M Pizer2.   

Abstract

Classifying medically imaged objects, e.g., into diseased and normal classes, has been one of the important goals in medical imaging. We propose a novel classification scheme that uses a skeletal representation to provide rich non-Euclidean geometric object properties. Our statistical method combines distance weighted discrimination (DWD) with a carefully chosen Euclideanization which takes full advantage of the geometry of the manifold on which these non-Euclidean geometric object properties (GOPs) live. Our method is evaluated via the task of classifying 3D hippocampi between schizophrenics and healthy controls. We address three central questions. 1) Does adding shape features increase discriminative power over the more standard classification based only on global volume? 2) If so, does our skeletal representation provide greater discriminative power than a conventional boundary point distribution model (PDM)? 3) Especially, is Euclideanization of non-Euclidean shape properties important in achieving high discriminative power? Measuring the capability of a method in terms of area under the receiver operator characteristic (ROC) curve, we show that our proposed method achieves strongly better classification than both the classification method based on global volume alone and the s-rep-based classification method without proper Euclideanization of non-Euclidean GOPs. We show classification using Euclideanized s-reps is also superior to classification using PDMs, whether the PDMs are first Euclideanized or not. We also show improved performance with Euclideanized boundary PDMs over non-linear boundary PDMs. This demonstrates the benefit that proper Euclideanization of non-Euclidean GOPs brings not only to s-rep-based classification but also to PDM-based classification.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Pattern classification; Shape analysis; Statistical analysis

Mesh:

Year:  2016        PMID: 26963609      PMCID: PMC4821729          DOI: 10.1016/j.media.2016.01.007

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  19 in total

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2.  Asymmetry of the brain surface from deformation field analysis.

Authors:  Jack L Lancaster; Peter V Kochunov; Paul M Thompson; Arthur W Toga; Peter T Fox
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3.  Shape discrimination in the hippocampus using an MDL model.

Authors:  Rhodri H Davies; Carole J Twining; P Daniel Allen; Tim F Cootes; Chris J Taylor
Journal:  Inf Process Med Imaging       Date:  2003-07

4.  Elastic geodesic paths in shape space of parameterized surfaces.

Authors:  Sebastian Kurtek; Eric Klassen; John C Gore; Zhaohua Ding; Anuj Srivastava
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-09       Impact factor: 6.226

5.  Parameterization-invariant shape statistics and probabilistic classification of anatomical surfaces.

Authors:  Sebastian Kurtek; Eric Klassen; Zhaohua Ding; Malcolm J Avison; Anuj Srivastava
Journal:  Inf Process Med Imaging       Date:  2011

6.  Skeletal shape correspondence via entropy minimization.

Authors:  Liyun Tu; Martin Styner; Jared Vicory; Beatriz Paniagua; Juan Carlos Prieto; Dan Yang; Stephen M Pizer
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7.  Localized differences in caudate and hippocampal shape are associated with schizophrenia but not antipsychotic type.

Authors:  Robert K McClure; Martin Styner; Eric Maltbie; Jeffrey A Lieberman; Sylvain Gouttard; Guido Gerig; Xiaoyan Shi; Hongtu Zhu
Journal:  Psychiatry Res       Date:  2012-11-09       Impact factor: 3.222

8.  Boundary and medial shape analysis of the hippocampus in schizophrenia.

Authors:  Martin Styner; Jeffrey A Lieberman; Dimitrios Pantazis; Guido Gerig
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

9.  Large deformation diffeomorphism and momentum based hippocampal shape discrimination in dementia of the Alzheimer type.

Authors:  Lei Wang; Faisal Beg; Tilak Ratnanather; Can Ceritoglu; Laurent Younes; John C Morris; John G Csernansky; Michael I Miller
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

10.  Digital facial dysmorphology for genetic screening: Hierarchical constrained local model using ICA.

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Journal:  Med Image Anal       Date:  2014-04-15       Impact factor: 8.545

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  6 in total

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2.  Skeletal Shape Correspondence Through Entropy.

Authors:  Liyun Tu; Martin Styner; Jared Vicory; Shireen Elhabian; Rui Wang; Junpyo Hong; Beatriz Paniagua; Juan C Prieto; Dan Yang; Ross Whitaker; Stephen M Pizer
Journal:  IEEE Trans Med Imaging       Date:  2017-09-21       Impact factor: 10.048

3.  A Segmentation Editing Framework Based on Shape Change Statistics.

Authors:  Mahmoud Mostapha; Jared Vicory; Martin Styner; Stephen Pizer
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-02-24

4.  Diffeomorphic Medial Modeling.

Authors:  Paul A Yushkevich; Ahmed Aly; Jiancong Wang; Long Xie; Robert C Gorman; Laurent Younes; Alison M Pouch
Journal:  Inf Process Med Imaging       Date:  2019-05-22

5.  Fitting unbranching skeletal structures to objects.

Authors:  Zhiyuan Liu; Junpyo Hong; Jared Vicory; James N Damon; Stephen M Pizer
Journal:  Med Image Anal       Date:  2021-03-04       Impact factor: 8.545

6.  Automatic construction of statistical shape models using deformable simplex meshes with vector field convolution energy.

Authors:  Jinke Wang; Changfa Shi
Journal:  Biomed Eng Online       Date:  2017-04-24       Impact factor: 2.819

  6 in total

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