| Literature DB >> 26958375 |
Irina A Odarich1, Anna V Pavlishchuk2, Valentina A Kalibabchuk1, Matti Haukka3.
Abstract
The centrosymmetric binuclear complex, [Cu2(C2H2N2O4)(C10H8Entities:
Keywords: Cu(II) complex; crystal structure; oxalodihydroxamic acid
Year: 2016 PMID: 26958375 PMCID: PMC4770973 DOI: 10.1107/S2056989016000050
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The crystal structure of complex (I), showing the atom labeling. Displacement ellipsoids are drawn at the 50% probability level.
Selected geometric parameters (Å, °)
| Cu1—O1 | 1.9848 (16) | Cu1—O2 | 2.2516 (16) |
| Cu1—N2 | 1.985 (2) | O1—C11 | 1.286 (3) |
| Cu1—N3i | 1.986 (2) | O5—N3 | 1.404 (3) |
| Cu1—N1 | 1.9966 (19) | ||
| O1—Cu1—N2 | 90.36 (7) | O1—Cu1—O2 | 98.04 (6) |
| O1—Cu1—N3i | 82.73 (7) | N2—Cu1—O2 | 97.53 (7) |
| N2—Cu1—N1 | 81.76 (8) | N3i—Cu1—O2 | 96.15 (7) |
| N3i—Cu1—N1 | 103.13 (8) | N1—Cu1—O2 | 90.72 (7) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O5—H5 | 0.92 (5) | 2.12 (5) | 2.912 (3) | 144 (4) |
| C4—H4⋯O2ii | 0.95 | 2.42 | 3.359 (3) | 171 |
| C7—H7⋯O2ii | 0.95 | 2.31 | 3.226 (3) | 162 |
| C3—H3⋯O7iii | 0.95 | 2.50 | 3.239 (3) | 134 |
| C13—H13 | 0.98 | 2.56 | 3.409 (3) | 145 |
| C13—H13 | 0.98 | 2.48 | 3.346 (3) | 148 |
| C13—H13 | 0.98 | 2.65 | 3.442 (3) | 138 |
| C12—H12 | 0.98 | 2.36 | 3.175 (3) | 140 |
| C8—H8⋯O9ii | 0.95 | 2.56 | 3.462 (3) | 159 |
| C12—H12 | 0.98 | 2.59 | 3.470 (3) | 150 |
Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) .
Figure 2The crystal packing of complex (I).
Experimental details
| Crystal data | |
| Chemical formula | [Cu2(C2H2N2O4)(C10H8N2)2(C2H6OS)2](ClO4)2 |
|
| 912.66 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 100 |
|
| 7.3641 (2), 10.3759 (5), 12.1358 (5) |
| α, β, γ (°) | 68.853 (2), 84.803 (3), 87.825 (3) |
|
| 861.27 (6) |
|
| 1 |
| Radiation type | Mo |
| μ (mm−1) | 1.59 |
| Crystal size (mm) | 0.13 × 0.12 × 0.12 |
| Data collection | |
| Diffractometer | Nonius KappaCCD |
| Absorption correction | Multi-scan ( |
|
| 0.789, 0.835 |
| No. of measured, independent and observed [ | 18205, 3943, 3351 |
|
| 0.039 |
| (sin θ/λ)max (Å−1) | 0.649 |
| Refinement | |
|
| 0.034, 0.087, 1.11 |
| No. of reflections | 3943 |
| No. of parameters | 241 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.74, −0.55 |
Computer programs: COLLECT (Bruker, 2004 ▸), DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014/7 (Sheldrick, 2015 ▸), Mercury (Macrae et al., 2008 ▸) and publCIF (Westrip, 2010 ▸).
| [Cu2(C2H2N2O4)(C10H8N2)2(C2H6OS)2](ClO4)2 | |
| Triclinic, | |
| Mo | |
| Cell parameters from 26719 reflections | |
| θ = 1.0–27.5° | |
| α = 68.853 (2)° | µ = 1.59 mm−1 |
| β = 84.803 (3)° | |
| γ = 87.825 (3)° | Block, pale blue |
| 0.13 × 0.12 × 0.12 mm |
| Nonius KappaCCD diffractometer | 3351 reflections with |
| Radiation source: fine-focus sealed tube | |
| ω scans | θmax = 27.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 18205 measured reflections | |
| 3943 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3943 reflections | Δρmax = 0.74 e Å−3 |
| 241 parameters | Δρmin = −0.55 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Cu1 | 0.81268 (4) | 0.11133 (3) | 0.38671 (2) | 0.01840 (10) | |
| Cl1 | 0.71265 (8) | −0.30071 (6) | 0.19039 (5) | 0.02481 (14) | |
| S1 | 0.85060 (7) | 0.28499 (6) | 0.10324 (5) | 0.01997 (14) | |
| O1 | 0.6724 (2) | −0.05948 (17) | 0.41752 (15) | 0.0210 (3) | |
| O2 | 0.7106 (2) | 0.23761 (17) | 0.21002 (14) | 0.0221 (4) | |
| O5 | 0.4262 (2) | −0.26749 (18) | 0.48100 (16) | 0.0243 (4) | |
| H5O | 0.528 (6) | −0.253 (5) | 0.428 (4) | 0.083 (14)* | |
| O6 | 0.6917 (3) | −0.3371 (2) | 0.31798 (18) | 0.0383 (5) | |
| O7 | 0.5444 (3) | −0.3243 (2) | 0.1500 (2) | 0.0423 (5) | |
| O8 | 0.8557 (3) | −0.3841 (2) | 0.16071 (18) | 0.0344 (4) | |
| O9 | 0.7598 (3) | −0.15753 (19) | 0.13534 (19) | 0.0365 (5) | |
| N1 | 0.9922 (3) | 0.2580 (2) | 0.36990 (17) | 0.0192 (4) | |
| N2 | 1.0297 (3) | 0.0299 (2) | 0.32626 (17) | 0.0192 (4) | |
| N3 | 0.3959 (3) | −0.1523 (2) | 0.51515 (17) | 0.0192 (4) | |
| C1 | 0.9598 (3) | 0.3726 (3) | 0.3950 (2) | 0.0238 (5) | |
| H1 | 0.8409 | 0.3883 | 0.4252 | 0.029* | |
| C2 | 1.0948 (3) | 0.4694 (3) | 0.3781 (2) | 0.0255 (5) | |
| H2 | 1.0683 | 0.5499 | 0.3967 | 0.031* | |
| C3 | 1.2673 (3) | 0.4473 (3) | 0.3342 (2) | 0.0257 (5) | |
| H3 | 1.3624 | 0.5108 | 0.3248 | 0.031* | |
| C4 | 1.3010 (3) | 0.3309 (2) | 0.3038 (2) | 0.0222 (5) | |
| H4 | 1.4180 | 0.3153 | 0.2708 | 0.027* | |
| C5 | 1.1604 (3) | 0.2381 (2) | 0.3224 (2) | 0.0199 (5) | |
| C6 | 1.1790 (3) | 0.1118 (2) | 0.2922 (2) | 0.0203 (5) | |
| C7 | 1.3330 (3) | 0.0781 (3) | 0.2340 (2) | 0.0241 (5) | |
| H7 | 1.4356 | 0.1376 | 0.2100 | 0.029* | |
| C8 | 1.3359 (3) | −0.0434 (3) | 0.2112 (2) | 0.0261 (5) | |
| H8 | 1.4398 | −0.0679 | 0.1705 | 0.031* | |
| C9 | 1.1844 (3) | −0.1290 (3) | 0.2487 (2) | 0.0249 (5) | |
| H9 | 1.1846 | −0.2140 | 0.2358 | 0.030* | |
| C10 | 1.0341 (3) | −0.0888 (2) | 0.3050 (2) | 0.0231 (5) | |
| H10 | 0.9300 | −0.1469 | 0.3295 | 0.028* | |
| C11 | 0.5220 (3) | −0.0590 (2) | 0.4801 (2) | 0.0183 (5) | |
| C12 | 0.8329 (4) | 0.1655 (3) | 0.0300 (2) | 0.0290 (6) | |
| H12A | 0.8580 | 0.0719 | 0.0845 | 0.044* | |
| H12B | 0.9215 | 0.1893 | −0.0395 | 0.044* | |
| H12C | 0.7095 | 0.1696 | 0.0047 | 0.044* | |
| C13 | 0.7529 (4) | 0.4328 (3) | −0.0024 (2) | 0.0266 (5) | |
| H13A | 0.6320 | 0.4095 | −0.0173 | 0.040* | |
| H13B | 0.8315 | 0.4622 | −0.0766 | 0.040* | |
| H13C | 0.7414 | 0.5081 | 0.0286 | 0.040* |
| Cu1 | 0.01496 (15) | 0.02100 (16) | 0.01911 (16) | −0.00278 (10) | 0.00203 (10) | −0.00758 (12) |
| Cl1 | 0.0209 (3) | 0.0239 (3) | 0.0307 (3) | −0.0023 (2) | 0.0016 (2) | −0.0117 (2) |
| S1 | 0.0164 (3) | 0.0234 (3) | 0.0179 (3) | −0.0026 (2) | 0.0010 (2) | −0.0050 (2) |
| O1 | 0.0169 (8) | 0.0230 (8) | 0.0234 (9) | −0.0041 (6) | 0.0043 (6) | −0.0097 (7) |
| O2 | 0.0165 (8) | 0.0291 (9) | 0.0187 (8) | −0.0036 (7) | 0.0033 (6) | −0.0069 (7) |
| O5 | 0.0229 (9) | 0.0232 (9) | 0.0297 (10) | −0.0029 (7) | 0.0045 (7) | −0.0143 (8) |
| O6 | 0.0423 (12) | 0.0437 (12) | 0.0292 (10) | 0.0059 (9) | 0.0046 (9) | −0.0157 (9) |
| O7 | 0.0267 (10) | 0.0498 (13) | 0.0519 (13) | −0.0114 (9) | −0.0070 (9) | −0.0181 (11) |
| O8 | 0.0354 (11) | 0.0327 (10) | 0.0356 (11) | 0.0075 (8) | 0.0041 (8) | −0.0153 (9) |
| O9 | 0.0344 (11) | 0.0241 (10) | 0.0488 (13) | −0.0064 (8) | 0.0063 (9) | −0.0120 (9) |
| N1 | 0.0182 (9) | 0.0218 (10) | 0.0167 (9) | −0.0023 (7) | 0.0003 (7) | −0.0061 (8) |
| N2 | 0.0169 (9) | 0.0204 (10) | 0.0195 (10) | −0.0008 (7) | −0.0016 (8) | −0.0062 (8) |
| N3 | 0.0190 (10) | 0.0186 (9) | 0.0207 (10) | −0.0015 (7) | 0.0004 (8) | −0.0083 (8) |
| C1 | 0.0218 (12) | 0.0263 (13) | 0.0236 (12) | −0.0007 (9) | 0.0007 (10) | −0.0099 (10) |
| C2 | 0.0274 (13) | 0.0210 (12) | 0.0271 (13) | −0.0035 (10) | 0.0017 (10) | −0.0082 (10) |
| C3 | 0.0254 (13) | 0.0233 (12) | 0.0264 (13) | −0.0074 (10) | −0.0024 (10) | −0.0057 (10) |
| C4 | 0.0175 (11) | 0.0247 (12) | 0.0214 (12) | −0.0029 (9) | 0.0001 (9) | −0.0050 (10) |
| C5 | 0.0189 (11) | 0.0239 (12) | 0.0153 (11) | 0.0005 (9) | −0.0026 (9) | −0.0050 (9) |
| C6 | 0.0179 (11) | 0.0229 (12) | 0.0187 (11) | −0.0020 (9) | −0.0012 (9) | −0.0058 (9) |
| C7 | 0.0173 (11) | 0.0294 (13) | 0.0236 (13) | −0.0014 (9) | 0.0000 (9) | −0.0075 (10) |
| C8 | 0.0210 (12) | 0.0315 (13) | 0.0255 (13) | 0.0029 (10) | 0.0026 (10) | −0.0113 (11) |
| C9 | 0.0264 (13) | 0.0253 (13) | 0.0248 (13) | 0.0029 (10) | −0.0018 (10) | −0.0115 (10) |
| C10 | 0.0224 (12) | 0.0225 (12) | 0.0240 (12) | −0.0004 (9) | −0.0026 (10) | −0.0076 (10) |
| C11 | 0.0179 (11) | 0.0195 (11) | 0.0164 (11) | −0.0001 (9) | −0.0019 (9) | −0.0051 (9) |
| C12 | 0.0349 (14) | 0.0279 (13) | 0.0244 (13) | −0.0011 (11) | 0.0054 (11) | −0.0114 (11) |
| C13 | 0.0306 (13) | 0.0220 (12) | 0.0243 (13) | 0.0015 (10) | −0.0041 (10) | −0.0046 (10) |
| Cu1—O1 | 1.9848 (16) | C2—C3 | 1.376 (4) |
| Cu1—N2 | 1.985 (2) | C2—H2 | 0.9500 |
| Cu1—N3i | 1.986 (2) | C3—C4 | 1.393 (4) |
| Cu1—N1 | 1.9966 (19) | C3—H3 | 0.9500 |
| Cu1—O2 | 2.2516 (16) | C4—C5 | 1.388 (3) |
| Cl1—O9 | 1.4336 (19) | C4—H4 | 0.9500 |
| Cl1—O7 | 1.4339 (19) | C5—C6 | 1.481 (3) |
| Cl1—O8 | 1.4401 (19) | C6—C7 | 1.382 (3) |
| Cl1—O6 | 1.450 (2) | C7—C8 | 1.384 (4) |
| S1—O2 | 1.5234 (17) | C7—H7 | 0.9500 |
| S1—C12 | 1.781 (3) | C8—C9 | 1.390 (4) |
| S1—C13 | 1.783 (2) | C8—H8 | 0.9500 |
| O1—C11 | 1.286 (3) | C9—C10 | 1.378 (4) |
| O5—N3 | 1.404 (3) | C9—H9 | 0.9500 |
| O5—H5O | 0.92 (5) | C10—H10 | 0.9500 |
| N1—C1 | 1.338 (3) | C11—C11i | 1.486 (5) |
| N1—C5 | 1.359 (3) | C12—H12A | 0.9800 |
| N2—C10 | 1.345 (3) | C12—H12B | 0.9800 |
| N2—C6 | 1.355 (3) | C12—H12C | 0.9800 |
| N3—C11 | 1.296 (3) | C13—H13A | 0.9800 |
| N3—Cu1i | 1.986 (2) | C13—H13B | 0.9800 |
| C1—C2 | 1.389 (3) | C13—H13C | 0.9800 |
| C1—H1 | 0.9500 | ||
| O1—Cu1—N2 | 90.36 (7) | C2—C3—H3 | 120.4 |
| O1—Cu1—N3i | 82.73 (7) | C4—C3—H3 | 120.4 |
| N2—Cu1—N3i | 165.41 (8) | C5—C4—C3 | 118.8 (2) |
| O1—Cu1—N1 | 168.93 (7) | C5—C4—H4 | 120.6 |
| N2—Cu1—N1 | 81.76 (8) | C3—C4—H4 | 120.6 |
| N3i—Cu1—N1 | 103.13 (8) | N1—C5—C4 | 121.6 (2) |
| O1—Cu1—O2 | 98.04 (6) | N1—C5—C6 | 114.7 (2) |
| N2—Cu1—O2 | 97.53 (7) | C4—C5—C6 | 123.7 (2) |
| N3i—Cu1—O2 | 96.15 (7) | N2—C6—C7 | 121.8 (2) |
| N1—Cu1—O2 | 90.72 (7) | N2—C6—C5 | 114.2 (2) |
| O9—Cl1—O7 | 109.44 (13) | C7—C6—C5 | 124.1 (2) |
| O9—Cl1—O8 | 109.53 (12) | C6—C7—C8 | 119.1 (2) |
| O7—Cl1—O8 | 110.04 (13) | C6—C7—H7 | 120.4 |
| O9—Cl1—O6 | 109.19 (13) | C8—C7—H7 | 120.4 |
| O7—Cl1—O6 | 109.47 (13) | C7—C8—C9 | 119.0 (2) |
| O8—Cl1—O6 | 109.16 (12) | C7—C8—H8 | 120.5 |
| O2—S1—C12 | 105.19 (11) | C9—C8—H8 | 120.5 |
| O2—S1—C13 | 105.82 (11) | C10—C9—C8 | 119.1 (2) |
| C12—S1—C13 | 98.84 (13) | C10—C9—H9 | 120.5 |
| C11—O1—Cu1 | 110.68 (14) | C8—C9—H9 | 120.5 |
| S1—O2—Cu1 | 117.43 (9) | N2—C10—C9 | 122.2 (2) |
| N3—O5—H5O | 110 (3) | N2—C10—H10 | 118.9 |
| C1—N1—C5 | 119.0 (2) | C9—C10—H10 | 118.9 |
| C1—N1—Cu1 | 126.77 (16) | O1—C11—N3 | 127.6 (2) |
| C5—N1—Cu1 | 114.11 (16) | O1—C11—C11i | 119.6 (2) |
| C10—N2—C6 | 118.8 (2) | N3—C11—C11i | 112.8 (2) |
| C10—N2—Cu1 | 126.04 (16) | S1—C12—H12A | 109.5 |
| C6—N2—Cu1 | 114.74 (16) | S1—C12—H12B | 109.5 |
| C11—N3—O5 | 116.51 (19) | H12A—C12—H12B | 109.5 |
| C11—N3—Cu1i | 114.16 (16) | S1—C12—H12C | 109.5 |
| O5—N3—Cu1i | 129.32 (14) | H12A—C12—H12C | 109.5 |
| N1—C1—C2 | 122.0 (2) | H12B—C12—H12C | 109.5 |
| N1—C1—H1 | 119.0 | S1—C13—H13A | 109.5 |
| C2—C1—H1 | 119.0 | S1—C13—H13B | 109.5 |
| C3—C2—C1 | 119.3 (2) | H13A—C13—H13B | 109.5 |
| C3—C2—H2 | 120.4 | S1—C13—H13C | 109.5 |
| C1—C2—H2 | 120.4 | H13A—C13—H13C | 109.5 |
| C2—C3—C4 | 119.2 (2) | H13B—C13—H13C | 109.5 |
| H··· | ||||
| O5—H5 | 0.92 (5) | 2.12 (5) | 2.912 (3) | 144 (4) |
| C4—H4···O2ii | 0.95 | 2.42 | 3.359 (3) | 171 |
| C7—H7···O2ii | 0.95 | 2.31 | 3.226 (3) | 162 |
| C3—H3···O7iii | 0.95 | 2.50 | 3.239 (3) | 134 |
| C13—H13 | 0.98 | 2.56 | 3.409 (3) | 145 |
| C13—H13 | 0.98 | 2.48 | 3.346 (3) | 148 |
| C13—H13 | 0.98 | 2.65 | 3.442 (3) | 138 |
| C12—H12 | 0.98 | 2.36 | 3.175 (3) | 140 |
| C8—H8···O9ii | 0.95 | 2.56 | 3.462 (3) | 159 |
| C12—H12 | 0.98 | 2.59 | 3.470 (3) | 150 |