Literature DB >> 26938115

Assembly and operation of the autopatcher for automated intracellular neural recording in vivo.

Suhasa B Kodandaramaiah1,2,3, Gregory L Holst4, Ian R Wickersham1,2,3, Annabelle C Singer1,2,3, Giovanni Talei Franzesi1, Michael L McKinnon5, Craig R Forest4, Edward S Boyden1,2,3.   

Abstract

Whole-cell patch clamping in vivo is an important neuroscience technique that uniquely provides access to both suprathreshold spiking and subthreshold synaptic events of single neurons in the brain. This article describes how to set up and use the autopatcher, which is a robot for automatically obtaining high-yield and high-quality whole-cell patch clamp recordings in vivo. By following this protocol, a functional experimental rig for automated whole-cell patch clamping can be set up in 1 week. High-quality surgical preparation of mice takes ∼1 h, and each autopatching experiment can be carried out over periods lasting several hours. Autopatching should enable in vivo intracellular investigations to be accessible by a substantial number of neuroscience laboratories, and it enables labs that are already doing in vivo patch clamping to scale up their efforts by reducing training time for new lab members and increasing experimental durations by handling mentally intensive tasks automatically.

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Year:  2016        PMID: 26938115      PMCID: PMC4877510          DOI: 10.1038/nprot.2016.007

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  32 in total

1.  Whole-cell recordings in freely moving rats.

Authors:  Albert K Lee; Ian D Manns; Bert Sakmann; Michael Brecht
Journal:  Neuron       Date:  2006-08-17       Impact factor: 17.173

2.  Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo.

Authors:  Kazuo Kitamura; Benjamin Judkewitz; Masanobu Kano; Winfried Denk; Michael Häusser
Journal:  Nat Methods       Date:  2007-12-23       Impact factor: 28.547

3.  Head-anchored whole-cell recordings in freely moving rats.

Authors:  Albert K Lee; Jérôme Epsztein; Michael Brecht
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

4.  Whole-cell recording in vivo.

Authors:  Michael R DeWeese
Journal:  Curr Protoc Neurosci       Date:  2007-01

5.  In vivo light-induced activation of neural circuitry in transgenic mice expressing channelrhodopsin-2.

Authors:  Benjamin R Arenkiel; Joao Peca; Ian G Davison; Catia Feliciano; Karl Deisseroth; George J Augustine; Michael D Ehlers; Guoping Feng
Journal:  Neuron       Date:  2007-04-19       Impact factor: 17.173

Review 6.  Spatiotemporal representations in the olfactory system.

Authors:  Andreas T Schaefer; Troy W Margrie
Journal:  Trends Neurosci       Date:  2007-01-16       Impact factor: 13.837

7.  The contribution of single synapses to sensory representation in vivo.

Authors:  Alexander Arenz; R Angus Silver; Andreas T Schaefer; Troy W Margrie
Journal:  Science       Date:  2008-08-15       Impact factor: 47.728

8.  Intracellular dynamics of hippocampal place cells during virtual navigation.

Authors:  Christopher D Harvey; Forrest Collman; Daniel A Dombeck; David W Tank
Journal:  Nature       Date:  2009-10-15       Impact factor: 49.962

9.  The synaptic representation of sound source location in auditory cortex.

Authors:  Paul Chadderton; John P Agapiou; David McAlpine; Troy W Margrie
Journal:  J Neurosci       Date:  2009-11-11       Impact factor: 6.167

10.  Sparse representation of sounds in the unanesthetized auditory cortex.

Authors:  Tomás Hromádka; Michael R Deweese; Anthony M Zador
Journal:  PLoS Biol       Date:  2008-01       Impact factor: 8.029

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  24 in total

1.  Autonomous patch-clamp robot for functional characterization of neurons in vivo: development and application to mouse visual cortex.

Authors:  Gregory L Holst; William Stoy; Bo Yang; Ilya Kolb; Suhasa B Kodandaramaiah; Lu Li; Ulf Knoblich; Hongkui Zeng; Bilal Haider; Edward S Boyden; Craig R Forest
Journal:  J Neurophysiol       Date:  2019-04-10       Impact factor: 2.714

2.  Application of Automated Image-guided Patch Clamp for the Study of Neurons in Brain Slices.

Authors:  Qiuyu Wu; Alexander A Chubykin
Journal:  J Vis Exp       Date:  2017-07-31       Impact factor: 1.355

3.  Robotic navigation to subcortical neural tissue for intracellular electrophysiology in vivo.

Authors:  W A Stoy; I Kolb; G L Holst; Y Liew; A Pala; B Yang; E S Boyden; G B Stanley; C R Forest
Journal:  J Neurophysiol       Date:  2017-06-07       Impact factor: 2.714

4.  Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain.

Authors:  Annabelle C Singer; Giovanni Talei Franzesi; Suhasa B Kodandaramaiah; Francisco J Flores; Jeremy D Cohen; Albert K Lee; Christoph Borgers; Craig R Forest; Nancy J Kopell; Edward S Boyden
Journal:  J Neurophysiol       Date:  2017-05-31       Impact factor: 2.714

5.  Automated in vivo patch-clamp evaluation of extracellular multielectrode array spike recording capability.

Authors:  Brian D Allen; Caroline Moore-Kochlacs; Jacob G Bernstein; Justin P Kinney; Jorg Scholvin; Luís F Seoane; Chris Chronopoulos; Charlie Lamantia; Suhasa B Kodandaramaiah; Max Tegmark; Edward S Boyden
Journal:  J Neurophysiol       Date:  2018-07-11       Impact factor: 2.714

6.  High-yield, automated intracellular electrophysiology in retinal pigment epithelia.

Authors:  Colby F Lewallen; Qin Wan; Arvydas Maminishkis; William Stoy; Ilya Kolb; Nathan Hotaling; Kapil Bharti; Craig R Forest
Journal:  J Neurosci Methods       Date:  2019-09-25       Impact factor: 2.390

7.  Robots record brain activity inside neurons.

Authors:  Helen Shen
Journal:  Nature       Date:  2016-04-07       Impact factor: 49.962

8.  Tissue-like Neural Probes for Understanding and Modulating the Brain.

Authors:  Guosong Hong; Robert D Viveros; Theodore J Zwang; Xiao Yang; Charles M Lieber
Journal:  Biochemistry       Date:  2018-03-19       Impact factor: 3.162

9.  Automated identification of mouse visual areas with intrinsic signal imaging.

Authors:  Ashley L Juavinett; Ian Nauhaus; Marina E Garrett; Jun Zhuang; Edward M Callaway
Journal:  Nat Protoc       Date:  2016-12-01       Impact factor: 13.491

10.  Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo.

Authors:  Ho-Jun Suk; Ingrid van Welie; Suhasa B Kodandaramaiah; Brian Allen; Craig R Forest; Edward S Boyden
Journal:  Neuron       Date:  2017-08-30       Impact factor: 17.173

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