Literature DB >> 26936951

Leukocyte integrin αLβ2 headpiece structures: The αI domain, the pocket for the internal ligand, and concerted movements of its loops.

Mehmet Sen1, Timothy A Springer2.   

Abstract

High-resolution crystal structures of the headpiece of lymphocyte function-associated antigen-1 (integrin αLβ2) reveal how the αI domain interacts with its platform formed by the α-subunit β-propeller and β-subunit βI domains. The αLβ2 structures compared with αXβ2 structures show that the αI domain, tethered through its N-linker and a disulfide to a stable β-ribbon pillar near the center of the platform, can undergo remarkable pivoting and tilting motions that appear buffered by N-glycan decorations that differ between αL and αX subunits. Rerefined β2 integrin structures reveal details including pyroglutamic acid at the β2 N terminus and bending within the EGF1 domain. Allostery is relayed to the αI domain by an internal ligand that binds to a pocket at the interface between the β-propeller and βI domains. Marked differences between the αL and αX subunit β-propeller domains concentrate near the binding pocket and αI domain interfaces. Remarkably, movement in allostery in the βI domain of specificity determining loop 1 (SDL1) causes concerted movement of SDL2 and thereby tightens the binding pocket for the internal ligand.

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Year:  2016        PMID: 26936951      PMCID: PMC4801256          DOI: 10.1073/pnas.1601379113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  The C-terminal αI domain linker as a critical structural element in the conformational activation of αI integrins.

Authors:  Gabriele Weitz-Schmidt; Thomas Schürpf; Timothy A Springer
Journal:  J Biol Chem       Date:  2011-09-30       Impact factor: 5.157

2.  Structure of an integrin with an alphaI domain, complement receptor type 4.

Authors:  Can Xie; Jianghai Zhu; Xing Chen; Lizhi Mi; Noritaka Nishida; Timothy A Springer
Journal:  EMBO J       Date:  2009-12-24       Impact factor: 11.598

3.  Linking crystallographic model and data quality.

Authors:  P Andrew Karplus; Kay Diederichs
Journal:  Science       Date:  2012-05-25       Impact factor: 47.728

Review 4.  Integrin inside-out signaling and the immunological synapse.

Authors:  Timothy A Springer; Michael L Dustin
Journal:  Curr Opin Cell Biol       Date:  2011-11-28       Impact factor: 8.382

5.  α(V)β(3) integrin crystal structures and their functional implications.

Authors:  Xianchi Dong; Li-Zhi Mi; Jianghai Zhu; Wei Wang; Ping Hu; Bing-Hao Luo; Timothy A Springer
Journal:  Biochemistry       Date:  2012-10-29       Impact factor: 3.162

6.  Structure of a complete integrin ectodomain in a physiologic resting state and activation and deactivation by applied forces.

Authors:  Jianghai Zhu; Bing-Hao Luo; Tsan Xiao; Chengzhong Zhang; Noritaka Nishida; Timothy A Springer
Journal:  Mol Cell       Date:  2008-12-26       Impact factor: 17.970

7.  Functional and structural stability of the epidermal growth factor receptor in detergent micelles and phospholipid nanodiscs.

Authors:  Li-Zhi Mi; Michael J Grey; Noritaka Nishida; Thomas Walz; Chafen Lu; Timothy A Springer
Journal:  Biochemistry       Date:  2008-09-05       Impact factor: 3.162

8.  Improved low-resolution crystallographic refinement with Phenix and Rosetta.

Authors:  Frank DiMaio; Nathaniel Echols; Jeffrey J Headd; Thomas C Terwilliger; Paul D Adams; David Baker
Journal:  Nat Methods       Date:  2013-09-29       Impact factor: 28.547

9.  Complete integrin headpiece opening in eight steps.

Authors:  Jieqing Zhu; Jianghai Zhu; Timothy A Springer
Journal:  J Cell Biol       Date:  2013-06-24       Impact factor: 10.539

10.  Crystal structure of α5β1 integrin ectodomain: atomic details of the fibronectin receptor.

Authors:  Masamichi Nagae; Suyong Re; Emiko Mihara; Terukazu Nogi; Yuji Sugita; Junichi Takagi
Journal:  J Cell Biol       Date:  2012-03-26       Impact factor: 10.539

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  19 in total

1.  Distinct recognition of complement iC3b by integrins αXβ2 and αMβ2.

Authors:  Shutong Xu; Jianchuan Wang; Jia-Huai Wang; Timothy A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-14       Impact factor: 11.205

2.  Autonomous conformational regulation of β3 integrin and the conformation-dependent property of HPA-1a alloantibodies.

Authors:  Aye Myat Myat Thinn; Zhengli Wang; Dongwen Zhou; Yan Zhao; Brian R Curtis; Jieqing Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-12       Impact factor: 11.205

3.  Mechanically Regulated Outside-In Activation of an I-Domain-Containing Integrin.

Authors:  Debin Mao; Shouqin Lü; Xiao Zhang; Mian Long
Journal:  Biophys J       Date:  2020-08-05       Impact factor: 4.033

4.  A pivotal role for a conserved bulky residue at the α1-helix of the αI integrin domain in ligand binding.

Authors:  Zhengli Wang; Aye Myat Myat Thinn; Jieqing Zhu
Journal:  J Biol Chem       Date:  2017-10-27       Impact factor: 5.157

5.  High integrin αVβ6 affinity reached by hybrid domain deletion slows ligand-binding on-rate.

Authors:  Xianchi Dong; Bo Zhao; Fu-Yang Lin; Chafen Lu; Bruce N Rogers; Timothy A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-29       Impact factor: 11.205

6.  Ligand- and cation-induced structural alterations of the leukocyte integrin LFA-1.

Authors:  Mehmet Sen; Adem C Koksal; Koichi Yuki; Jianchuan Wang; Timothy A Springer
Journal:  J Biol Chem       Date:  2018-03-05       Impact factor: 5.157

Review 7.  CD11b agonists offer a novel approach for treating lupus nephritis.

Authors:  Veronica Villanueva; Xiaobo Li; Viviana Jimenez; Hafeez M Faridi; Vineet Gupta
Journal:  Transl Res       Date:  2022-03-12       Impact factor: 10.171

8.  Direction of actin flow dictates integrin LFA-1 orientation during leukocyte migration.

Authors:  Pontus Nordenfelt; Travis I Moore; Shalin B Mehta; Joseph Mathew Kalappurakkal; Vinay Swaminathan; Nobuyasu Koga; Talley J Lambert; David Baker; Jennifer C Waters; Rudolf Oldenbourg; Tomomi Tani; Satyajit Mayor; Clare M Waterman; Timothy A Springer
Journal:  Nat Commun       Date:  2017-12-11       Impact factor: 14.919

9.  Salt-bridge modulates differential calcium-mediated ligand binding to integrin α1- and α2-I domains.

Authors:  Kyle L Brown; Surajit Banerjee; Andrew Feigley; Hanna Abe; Timothy S Blackwell; Ambra Pozzi; Billy G Hudson; Roy Zent
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

Review 10.  Research advances on structure and biological functions of integrins.

Authors:  Li Pan; Yuan Zhao; Zhijie Yuan; Guixin Qin
Journal:  Springerplus       Date:  2016-07-15
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