Literature DB >> 26931817

DR-TAMAS: Diffeomorphic Registration for Tensor Accurate Alignment of Anatomical Structures.

M Okan Irfanoglu1, Amritha Nayak2, Jeffrey Jenkins2, Elizabeth B Hutchinson2, Neda Sadeghi3, Cibu P Thomas4, Carlo Pierpaoli3.   

Abstract

In this work, we propose DR-TAMAS (Diffeomorphic Registration for Tensor Accurate alignMent of Anatomical Structures), a novel framework for intersubject registration of Diffusion Tensor Imaging (DTI) data sets. This framework is optimized for brain data and its main goal is to achieve an accurate alignment of all brain structures, including white matter (WM), gray matter (GM), and spaces containing cerebrospinal fluid (CSF). Currently most DTI-based spatial normalization algorithms emphasize alignment of anisotropic structures. While some diffusion-derived metrics, such as diffusion anisotropy and tensor eigenvector orientation, are highly informative for proper alignment of WM, other tensor metrics such as the trace or mean diffusivity (MD) are fundamental for a proper alignment of GM and CSF boundaries. Moreover, it is desirable to include information from structural MRI data, e.g., T1-weighted or T2-weighted images, which are usually available together with the diffusion data. The fundamental property of DR-TAMAS is to achieve global anatomical accuracy by incorporating in its cost function the most informative metrics locally. Another important feature of DR-TAMAS is a symmetric time-varying velocity-based transformation model, which enables it to account for potentially large anatomical variability in healthy subjects and patients. The performance of DR-TAMAS is evaluated with several data sets and compared with other widely-used diffeomorphic image registration techniques employing both full tensor information and/or DTI-derived scalar maps. Our results show that the proposed method has excellent overall performance in the entire brain, while being equivalent to the best existing methods in WM.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Diffeomorphic image registration; Diffusion tensor imaging; Fiber tractography

Mesh:

Year:  2016        PMID: 26931817      PMCID: PMC4851878          DOI: 10.1016/j.neuroimage.2016.02.066

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  47 in total

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Authors:  Neda Sadeghi; Filippo Arrigoni; Maria Grazia D'Angelo; Cibu Thomas; M Okan Irfanoglu; Elizabeth B Hutchinson; Amritha Nayak; Pooja Modi; Maria Teresa Bassi; Carlo Pierpaoli
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6.  Evaluation of standardized and study-specific diffusion tensor imaging templates of the adult human brain: Template characteristics, spatial normalization accuracy, and detection of small inter-group FA differences.

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7.  Brain phenotyping in Moebius syndrome and other congenital facial weakness disorders by diffusion MRI morphometry.

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9.  Quantitative MRI and DTI Abnormalities During the Acute Period Following CCI in the Ferret.

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10.  Defining an Analytic Framework to Evaluate Quantitative MRI Markers of Traumatic Axonal Injury: Preliminary Results in a Mouse Closed Head Injury Model.

Authors:  M Haber; E B Hutchinson; N Sadeghi; W H Cheng; D Namjoshi; P Cripton; M O Irfanoglu; C Wellington; R Diaz-Arrastia; C Pierpaoli
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