Literature DB >> 26929141

Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans.

Adam Monier1,2, Alexandra Z Worden3,4, Thomas A Richards1,4.   

Abstract

High-throughput diversity amplicon sequencing of marine microbial samples has revealed that members of the Mamiellophyceae lineage are successful phytoplankton in many oceanic habitats. Indeed, these eukaryotic green algae can dominate the picoplanktonic biomass, however, given the broad expanses of the oceans, their geographical distributions and the phylogenetic diversity of some groups remain poorly characterized. As these algae play a foundational role in marine food webs, it is crucial to assess their global distribution in order to better predict potential changes in abundance and community structure. To this end, we analyzed the V9-18S small subunit rDNA sequences deposited from the Tara Oceans expedition to evaluate the diversity and biogeography of these phytoplankton. Our results show that the phylogenetic composition of Mamiellophyceae communities is in part determined by geographical provenance, and do not appear to be influenced - in the samples recovered - by water depth, at least at the resolution possible with the V9-18S. Phylogenetic classification of Mamiellophyceae sequences revealed that the Dolichomastigales order encompasses more sequence diversity than other orders in this lineage. These results indicate that a large fraction of the Mamiellophyceae diversity has been hitherto overlooked, likely because of a combination of size fraction, sequencing and geographical limitations.
© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2016        PMID: 26929141     DOI: 10.1111/1758-2229.12390

Source DB:  PubMed          Journal:  Environ Microbiol Rep        ISSN: 1758-2229            Impact factor:   3.541


  14 in total

1.  Seasonal patterns in Arctic prasinophytes and inferred ecology of Bathycoccus unveiled in an Arctic winter metagenome.

Authors:  Nathalie Joli; Adam Monier; Ramiro Logares; Connie Lovejoy
Journal:  ISME J       Date:  2017-03-07       Impact factor: 10.302

2.  Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton.

Authors:  Adam Monier; Aurélie Chambouvet; David S Milner; Victoria Attah; Ramón Terrado; Connie Lovejoy; Hervé Moreau; Alyson E Santoro; Évelyne Derelle; Thomas A Richards
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-21       Impact factor: 11.205

3.  Single cell ecogenomics reveals mating types of individual cells and ssDNA viral infections in the smallest photosynthetic eukaryotes.

Authors:  L Felipe Benites; Nicole Poulton; Karine Labadie; Michael E Sieracki; Nigel Grimsley; Gwenael Piganeau
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-10-07       Impact factor: 6.237

4.  Prasinovirus Attack of Ostreococcus Is Furtive by Day but Savage by Night.

Authors:  Evelyne Derelle; Sheree Yau; Hervé Moreau; Nigel H Grimsley
Journal:  J Virol       Date:  2018-01-30       Impact factor: 5.103

5.  Microbial planktonic communities in the Red Sea: high levels of spatial and temporal variability shaped by nutrient availability and turbulence.

Authors:  John K Pearman; Joanne Ellis; Xabier Irigoien; Y V B Sarma; Burton H Jones; Susana Carvalho
Journal:  Sci Rep       Date:  2017-07-26       Impact factor: 4.379

6.  Novel diversity within marine Mamiellophyceae (Chlorophyta) unveiled by metabarcoding.

Authors:  Margot Tragin; Daniel Vaulot
Journal:  Sci Rep       Date:  2019-03-26       Impact factor: 4.379

7.  Genome Resolved Biogeography of Mamiellales.

Authors:  Jade Leconte; L Felipe Benites; Thomas Vannier; Patrick Wincker; Gwenael Piganeau; Olivier Jaillon
Journal:  Genes (Basel)       Date:  2020-01-07       Impact factor: 4.096

8.  Eukaryotic Phytoplankton Contributing to a Seasonal Bloom and Carbon Export Revealed by Tracking Sequence Variants in the Western North Pacific.

Authors:  Takuhei Shiozaki; Yuu Hirose; Koji Hamasaki; Ryo Kaneko; Kazuo Ishikawa; Naomi Harada
Journal:  Front Microbiol       Date:  2019-11-26       Impact factor: 5.640

9.  Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean.

Authors:  Hiroto Kaneko; Romain Blanc-Mathieu; Hisashi Endo; Samuel Chaffron; Tom O Delmont; Morgan Gaia; Nicolas Henry; Rodrigo Hernández-Velázquez; Canh Hao Nguyen; Hiroshi Mamitsuka; Patrick Forterre; Olivier Jaillon; Colomban de Vargas; Matthew B Sullivan; Curtis A Suttle; Lionel Guidi; Hiroyuki Ogata
Journal:  iScience       Date:  2020-12-29

10.  Comparative analyses of the V4 and V9 regions of 18S rDNA for the extant eukaryotic community using the Illumina platform.

Authors:  Jaeho Choi; Jong Soo Park
Journal:  Sci Rep       Date:  2020-04-16       Impact factor: 4.379

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