Literature DB >> 26922680

A minimum-error, energy-constrained neural code is an instantaneous-rate code.

Erik C Johnson1,2,3, Douglas L Jones4,5,6,7,8, Rama Ratnam9,10,11.   

Abstract

Sensory neurons code information about stimuli in their sequence of action potentials (spikes). Intuitively, the spikes should represent stimuli with high fidelity. However, generating and propagating spikes is a metabolically expensive process. It is therefore likely that neural codes have been selected to balance energy expenditure against encoding error. Our recently proposed optimal, energy-constrained neural coder (Jones et al. Frontiers in Computational Neuroscience, 9, 61 2015) postulates that neurons time spikes to minimize the trade-off between stimulus reconstruction error and expended energy by adjusting the spike threshold using a simple dynamic threshold. Here, we show that this proposed coding scheme is related to existing coding schemes, such as rate and temporal codes. We derive an instantaneous rate coder and show that the spike-rate depends on the signal and its derivative. In the limit of high spike rates the spike train maximizes fidelity given an energy constraint (average spike-rate), and the predicted interspike intervals are identical to those generated by our existing optimal coding neuron. The instantaneous rate coder is shown to closely match the spike-rates recorded from P-type primary afferents in weakly electric fish. In particular, the coder is a predictor of the peristimulus time histogram (PSTH). When tested against in vitro cortical pyramidal neuron recordings, the instantaneous spike-rate approximates DC step inputs, matching both the average spike-rate and the time-to-first-spike (a simple temporal code). Overall, the instantaneous rate coder relates optimal, energy-constrained encoding to the concepts of rate-coding and temporal-coding, suggesting a possible unifying principle of neural encoding of sensory signals.

Keywords:  Energy efficient coding; Instantaneous rate; Rate coding; Sensory coding; Temporal coding

Mesh:

Year:  2016        PMID: 26922680     DOI: 10.1007/s10827-016-0592-x

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  41 in total

1.  Negative interspike interval correlations increase the neuronal capacity for encoding time-dependent stimuli.

Authors:  M J Chacron; A Longtin; L Maler
Journal:  J Neurosci       Date:  2001-07-15       Impact factor: 6.167

2.  Rate coding versus temporal order coding: what the retinal ganglion cells tell the visual cortex.

Authors:  R Van Rullen; S J Thorpe
Journal:  Neural Comput       Date:  2001-06       Impact factor: 2.026

3.  A unified approach to the study of temporal, correlational, and rate coding.

Authors:  S Panzeri; S R Schultz
Journal:  Neural Comput       Date:  2001-06       Impact factor: 2.026

4.  Nonrenewal statistics of electrosensory afferent spike trains: implications for the detection of weak sensory signals.

Authors:  R Ratnam; M E Nelson
Journal:  J Neurosci       Date:  2000-09-01       Impact factor: 6.167

5.  Interspike interval correlations, memory, adaptation, and refractoriness in a leaky integrate-and-fire model with threshold fatigue.

Authors:  Maurice J Chacron; Khashayar Pakdaman; André Longtin
Journal:  Neural Comput       Date:  2003-02       Impact factor: 2.026

6.  Millisecond encoding precision of auditory cortex neurons.

Authors:  Christoph Kayser; Nikos K Logothetis; Stefano Panzeri
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-13       Impact factor: 11.205

Review 7.  Pathways modulating neural KCNQ/M (Kv7) potassium channels.

Authors:  Patrick Delmas; David A Brown
Journal:  Nat Rev Neurosci       Date:  2005-11       Impact factor: 34.870

8.  Rapid neural coding in the retina with relative spike latencies.

Authors:  Tim Gollisch; Markus Meister
Journal:  Science       Date:  2008-02-22       Impact factor: 47.728

Review 9.  Is there a neural code?

Authors:  J J Eggermont
Journal:  Neurosci Biobehav Rev       Date:  1998-03       Impact factor: 8.989

10.  Directional characteristics of tuberous electroreceptors in the weakly electric fish, Hypopomus (Gymnotiformes).

Authors:  D D Yager; C D Hopkins
Journal:  J Comp Physiol A       Date:  1993-10       Impact factor: 1.836

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  1 in total

1.  A dynamic spike threshold with correlated noise predicts observed patterns of negative interval correlations in neuronal spike trains.

Authors:  Robin S Sidhu; Erik C Johnson; Douglas L Jones; Rama Ratnam
Journal:  Biol Cybern       Date:  2022-10-16       Impact factor: 3.072

  1 in total

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