Literature DB >> 26913077

n-Butanol production in Saccharomyces cerevisiae is limited by the availability of coenzyme A and cytosolic acetyl-CoA.

Virginia Schadeweg1, Eckhard Boles1.   

Abstract

BACKGROUND: Butanol isomers are regarded as more suitable fuel substitutes than bioethanol. n-Butanol is naturally produced by some Clostridia species, but due to inherent problems with clostridial fermentations, industrially more relevant organisms have been genetically engineered for n-butanol production. Although the yeast Saccharomyces cerevisiae holds significant advantages in terms of scalable industrial fermentation, n-butanol yields and titers obtained so far are only low.
RESULTS: Here we report a thorough analysis and significant improvements of n-butanol production from glucose with yeast via the acetoacetyl-CoA-derived pathway. First, we established an improved n-butanol pathway by testing various isoenzymes of different pathway reactions. This resulted in n-butanol titers around 15 mg/L in synthetic medium after 74 h. As the initial substrate of the n-butanol pathway is acetyl-coenzyme A (acetyl-CoA) and most intermediates are bound to coenzyme A (CoA), we increased CoA synthesis by overexpression of the pantothenate kinase coaA gene from Escherichia coli. Supplementation with pantothenate increased n-butanol production up to 34 mg/L. Additional reduction of ethanol formation by deletion of alcohol dehydrogenase genes ADH1-5 led to n-butanol titers of 71 mg/L. Further expression of a mutant form of an ATP independent acetylating acetaldehyde dehydrogenase, adhE(A267T/E568K), converting acetaldehyde into acetyl-CoA, resulted in 95 mg/L n-butanol. In the final strain, the n-butanol pathway genes, coaA and adhE (A267T/E568K), were stably integrated into the yeast genome, thereby deleting another alcohol dehydrogenase gene, ADH6, and GPD2-encoding glycerol-3-phosphate dehydrogenase. This led to a further decrease in ethanol and glycerol by-product formation and elevated redox power in the form of NADH. With the addition of pantothenate, this strain produced n-butanol up to a titer of 130 ± 20 mg/L and a yield of 0.012 g/g glucose. These are the highest values reported so far for S. cerevisiae in synthetic medium via an acetoacetyl-CoA-derived n-butanol pathway.
CONCLUSIONS: By gradually increasing substrate supply and redox power in the form of CoA, acetyl-CoA, and NADH, and decreasing ethanol and glycerol formation, we could stepwise increase n-butanol production in S. cerevisiae. However, still further bottlenecks in the n-butanol pathway must be deciphered and improved for industrially relevant n-butanol production levels.

Entities:  

Keywords:  ABE fermentation; Coenzyme A; Pantothenate; Saccharomyces; acetyl-CoA; n-butanol

Year:  2016        PMID: 26913077      PMCID: PMC4765181          DOI: 10.1186/s13068-016-0456-7

Source DB:  PubMed          Journal:  Biotechnol Biofuels        ISSN: 1754-6834            Impact factor:   6.040


  43 in total

1.  Cofactor engineering of intracellular CoA/acetyl-CoA and its effect on metabolic flux redistribution in Escherichia coli.

Authors:  Ravishankar V Vadali; George N Bennett; Ka-Yiu San
Journal:  Metab Eng       Date:  2004-04       Impact factor: 9.783

2.  Utilizing an endogenous pathway for 1-butanol production in Saccharomyces cerevisiae.

Authors:  Tong Si; Yunzi Luo; Han Xiao; Huimin Zhao
Journal:  Metab Eng       Date:  2014-01-09       Impact factor: 9.783

Review 3.  Genetic modification of critical enzymes and involved genes in butanol biosynthesis from biomass.

Authors:  He Huang; Hui Liu; Yi-Ru Gan
Journal:  Biotechnol Adv       Date:  2010-05-24       Impact factor: 14.227

4.  Metabolic pathway engineering for fatty acid ethyl ester production in Saccharomyces cerevisiae using stable chromosomal integration.

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Journal:  J Ind Microbiol Biotechnol       Date:  2014-11-25       Impact factor: 3.346

5.  System of centromeric, episomal, and integrative vectors based on drug resistance markers for Saccharomyces cerevisiae.

Authors:  Christof Taxis; Michael Knop
Journal:  Biotechniques       Date:  2006-01       Impact factor: 1.993

6.  A novel alternate anaplerotic pathway to the glyoxylate cycle in streptomycetes.

Authors:  L Han; K A Reynolds
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

7.  Genetic analysis of coenzyme A biosynthesis in the yeast Saccharomyces cerevisiae: identification of a conditional mutation in the pantothenate kinase gene CAB1.

Authors:  Judith Olzhausen; Sabrina Schübbe; Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2009-03-06       Impact factor: 3.886

Review 8.  Fermentative butanol production by Clostridia.

Authors:  Sang Yup Lee; Jin Hwan Park; Seh Hee Jang; Lars K Nielsen; Jaehyun Kim; Kwang S Jung
Journal:  Biotechnol Bioeng       Date:  2008-10-01       Impact factor: 4.530

9.  Codon-optimized bacterial genes improve L-Arabinose fermentation in recombinant Saccharomyces cerevisiae.

Authors:  Beate Wiedemann; Eckhard Boles
Journal:  Appl Environ Microbiol       Date:  2008-02-08       Impact factor: 4.792

10.  Butanol production in S. cerevisiae via a synthetic ABE pathway is enhanced by specific metabolic engineering and butanol resistance.

Authors:  R Swidah; H Wang; P J Reid; H Z Ahmed; A M Pisanelli; K C Persaud; C M Grant; M P Ashe
Journal:  Biotechnol Biofuels       Date:  2015-07-08       Impact factor: 6.040

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  13 in total

Review 1.  Progress and perspectives on improving butanol tolerance.

Authors:  Siqing Liu; Nasib Qureshi; Stephen R Hughes
Journal:  World J Microbiol Biotechnol       Date:  2017-02-11       Impact factor: 3.312

Review 2.  Rewiring yeast metabolism to synthesize products beyond ethanol.

Authors:  Francesca V Gambacorta; Joshua J Dietrich; Qiang Yan; Brian F Pfleger
Journal:  Curr Opin Chem Biol       Date:  2020-10-05       Impact factor: 8.822

3.  Increasing n-butanol production with Saccharomyces cerevisiae by optimizing acetyl-CoA synthesis, NADH levels and trans-2-enoyl-CoA reductase expression.

Authors:  Virginia Schadeweg; Eckhard Boles
Journal:  Biotechnol Biofuels       Date:  2016-11-25       Impact factor: 6.040

4.  Engineering metabolic pathways in Amycolatopsis japonicum for the optimization of the precursor supply for heterologous brasilicardin congeners production.

Authors:  Paul N Schwarz; Luisa Roller; Andreas Kulik; Wolfgang Wohlleben; Evi Stegmann
Journal:  Synth Syst Biotechnol       Date:  2018-01-12

5.  Effects of acetoacetyl-CoA synthase expression on production of farnesene in Saccharomyces cerevisiae.

Authors:  Stefan Tippmann; Raphael Ferreira; Verena Siewers; Jens Nielsen; Yun Chen
Journal:  J Ind Microbiol Biotechnol       Date:  2017-02-09       Impact factor: 3.346

6.  The sole introduction of two single-point mutations establishes glycerol utilization in Saccharomyces cerevisiae CEN.PK derivatives.

Authors:  Ping-Wei Ho; Steve Swinnen; Jorge Duitama; Elke Nevoigt
Journal:  Biotechnol Biofuels       Date:  2017-01-03       Impact factor: 6.040

7.  n-Butanol production in S. cerevisiae: co-ordinate use of endogenous and exogenous pathways.

Authors:  R Swidah; O Ogunlabi; C M Grant; M P Ashe
Journal:  Appl Microbiol Biotechnol       Date:  2018-09-01       Impact factor: 4.813

Review 8.  Engineering Saccharomyces cerevisiae cells for production of fatty acid-derived biofuels and chemicals.

Authors:  Yating Hu; Zhiwei Zhu; Jens Nielsen; Verena Siewers
Journal:  Open Biol       Date:  2019-05-31       Impact factor: 6.411

9.  De novo production of aromatic m-cresol in Saccharomyces cerevisiae mediated by heterologous polyketide synthases combined with a 6-methylsalicylic acid decarboxylase.

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Journal:  Metab Eng Commun       Date:  2019-05-04

Review 10.  Saccharomyces cerevisiae and its industrial applications.

Authors:  Maria Parapouli; Anastasios Vasileiadis; Amalia-Sofia Afendra; Efstathios Hatziloukas
Journal:  AIMS Microbiol       Date:  2020-02-11
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