Literature DB >> 26901067

Frequent somatic CDH1 loss-of-function mutations in plasmacytoid variant bladder cancer.

Hikmat A Al-Ahmadie1, Gopa Iyer2,3, Byron H Lee4, Sasinya N Scott1, Rohit Mehra5, Aditya Bagrodia4, Emmet J Jordan3, Sizhi Paul Gao6, Ricardo Ramirez6,7, Eugene K Cha4, Neil B Desai8, Emily C Zabor9, Irina Ostrovnaya9, Anuradha Gopalan1, Ying-Bei Chen1, Samson W Fine1, Satish K Tickoo1, Anupama Gandhi1, Joseph Hreiki10, Agnès Viale10, Maria E Arcila1,10, Guido Dalbagni2,4, Jonathan E Rosenberg2,3, Bernard H Bochner2,4, Dean F Bajorin2,3, Michael F Berger1,10, Victor E Reuter1,2, Barry S Taylor6,9,10, David B Solit2,3,6,10.   

Abstract

Plasmacytoid bladder cancer is an aggressive histologic variant with a high risk of disease-specific mortality. Using whole-exome and targeted sequencing, we find that truncating somatic alterations in the CDH1 gene occur in 84% of plasmacytoid carcinomas and are specific to this histologic variant. Consistent with the aggressive clinical behavior of plasmacytoid carcinomas, which frequently recur locally, CRISPR/Cas9-mediated knockout of CDH1 in bladder cancer cells enhanced cell migration.

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Year:  2016        PMID: 26901067      PMCID: PMC4827439          DOI: 10.1038/ng.3503

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  23 in total

1.  The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.

Authors:  Aaron McKenna; Matthew Hanna; Eric Banks; Andrey Sivachenko; Kristian Cibulskis; Andrew Kernytsky; Kiran Garimella; David Altshuler; Stacey Gabriel; Mark Daly; Mark A DePristo
Journal:  Genome Res       Date:  2010-07-19       Impact factor: 9.043

2.  Plasmacytoid urothelial carcinoma: detailed analysis of morphology with clinicopathologic correlation in 17 cases.

Authors:  Priya Nigwekar; Pheroze Tamboli; Mitual B Amin; Adeboye O Osunkoya; David Ben-Dor; Mahul B Amin
Journal:  Am J Surg Pathol       Date:  2009-03       Impact factor: 6.394

3.  Methylation of the CDH1 promoter as the second genetic hit in hereditary diffuse gastric cancer.

Authors:  W M Grady; J Willis; P J Guilford; A K Dunbier; T T Toro; H Lynch; G Wiesner; K Ferguson; C Eng; J G Park; S J Kim; S Markowitz
Journal:  Nat Genet       Date:  2000-09       Impact factor: 38.330

4.  Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT): A Hybridization Capture-Based Next-Generation Sequencing Clinical Assay for Solid Tumor Molecular Oncology.

Authors:  Donavan T Cheng; Talia N Mitchell; Ahmet Zehir; Ronak H Shah; Ryma Benayed; Aijazuddin Syed; Raghu Chandramohan; Zhen Yu Liu; Helen H Won; Sasinya N Scott; A Rose Brannon; Catherine O'Reilly; Justyna Sadowska; Jacklyn Casanova; Angela Yannes; Jaclyn F Hechtman; Jinjuan Yao; Wei Song; Dara S Ross; Alifya Oultache; Snjezana Dogan; Laetitia Borsu; Meera Hameed; Khedoudja Nafa; Maria E Arcila; Marc Ladanyi; Michael F Berger
Journal:  J Mol Diagn       Date:  2015-03-20       Impact factor: 5.568

5.  Histologic variants of urothelial bladder cancer and nonurothelial histology in bladder cancer.

Authors:  Venu Chalasani; Joseph L Chin; Jonathan I Izawa
Journal:  Can Urol Assoc J       Date:  2009-12       Impact factor: 1.862

6.  BISMA--fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences.

Authors:  Christian Rohde; Yingying Zhang; Richard Reinhardt; Albert Jeltsch
Journal:  BMC Bioinformatics       Date:  2010-05-06       Impact factor: 3.169

7.  Plasmacytoid urothelial carcinoma, a chemosensitive cancer with poor prognosis, and peritoneal carcinomatosis.

Authors:  Farshid Dayyani; Bogdan A Czerniak; Kanishka Sircar; Mark F Munsell; Randall E Millikan; Colin P Dinney; Arlene O Siefker-Radtke
Journal:  J Urol       Date:  2012-11-15       Impact factor: 7.450

8.  Detecting somatic genetic alterations in tumor specimens by exon capture and massively parallel sequencing.

Authors:  Helen H Won; Sasinya N Scott; A Rose Brannon; Ronak H Shah; Michael F Berger
Journal:  J Vis Exp       Date:  2013-10-18       Impact factor: 1.355

9.  Somatic mutations and deletions of the E-cadherin gene predict poor survival of patients with gastric cancer.

Authors:  Giovanni Corso; Joana Carvalho; Daniele Marrelli; Carla Vindigni; Beatriz Carvalho; Raquel Seruca; Franco Roviello; Carla Oliveira
Journal:  J Clin Oncol       Date:  2013-01-22       Impact factor: 44.544

10.  Plasmacytoid variant of bladder cancer defines patients with poor prognosis if treated with cystectomy and adjuvant cisplatin-based chemotherapy.

Authors:  Bastian Keck; Sven Wach; Robert Stoehr; Frank Kunath; Simone Bertz; Jan Lehmann; Michael Stöckle; Helge Taubert; Bernd Wullich; Arndt Hartmann
Journal:  BMC Cancer       Date:  2013-02-08       Impact factor: 4.430

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  47 in total

1.  PD-L1 Expression in Urothelial Carcinoma With Predominant or Pure Variant Histology: Concordance Among 3 Commonly Used and Commercially Available Antibodies.

Authors:  Henning Reis; Rene Serrette; Jennifer Posada; Vincent Lu; Ying-Bei Chen; Anuradha Gopalan; Samson W Fine; Satish K Tickoo; Sahussapont J Sirintrapun; Gopa Iyer; Samuel A Funt; Min Yuen Teo; Jonathan E Rosenberg; Dean F Bajorin; Guido Dalbagni; Bernard H Bochner; David B Solit; Victor E Reuter; Hikmat A Al-Ahmadie
Journal:  Am J Surg Pathol       Date:  2019-07       Impact factor: 6.394

2.  Small-Cell Carcinomas of the Bladder and Lung Are Characterized by a Convergent but Distinct Pathogenesis.

Authors:  Matthew T Chang; Alexander Penson; Neil B Desai; Nicholas D Socci; Ronglai Shen; Venkatraman E Seshan; Ritika Kundra; Adam Abeshouse; Agnes Viale; Eugene K Cha; Xueli Hao; Victor E Reuter; Charles M Rudin; Bernard H Bochner; Jonathan E Rosenberg; Dean F Bajorin; Nikolaus Schultz; Michael F Berger; Gopa Iyer; David B Solit; Hikmat A Al-Ahmadie; Barry S Taylor
Journal:  Clin Cancer Res       Date:  2017-11-27       Impact factor: 12.531

Review 3.  Genomic Subtyping in Bladder Cancer.

Authors:  Tuomas Jalanko; Joep J de Jong; Ewan A Gibb; Roland Seiler; Peter C Black
Journal:  Curr Urol Rep       Date:  2020-03-13       Impact factor: 3.092

4.  Targeted sequencing of plasmacytoid urothelial carcinoma reveals frequent TERT promoter mutations.

Authors:  Doreen N Palsgrove; Diana Taheri; Simeon U Springer; Morgan Cowan; Gunes Guner; Maria A Mendoza Rodriguez; Maria Del Carmen Rodriguez Pena; Yuxuan Wang; Isaac Kinde; Bernardo F P Ricardo; Isabela Cunha; Kazutoshi Fujita; Dilek Ertoy; Kenneth W Kinzler; Trinity J Bivalacqua; Nickolas Papadopoulos; Bert Vogelstein; George J Netto
Journal:  Hum Pathol       Date:  2018-11-14       Impact factor: 3.466

5.  Genomic landscape of inverted urothelial papilloma and urothelial papilloma of the bladder.

Authors:  Sumit Isharwal; Wenhuo Hu; Judy Sarungbam; Ying-Bei Chen; Anuradha Gopalan; Samson W Fine; Satish K Tickoo; Sahussapont J Sirintrapun; Sana Jadallah; Florence L Loo; Eugene J Pietzak; Eugene K Cha; Bernard H Bochner; Michael F Berger; Gopa Iyer; David B Solit; Victor E Reuter; Hikmat Al-Ahmadie
Journal:  J Pathol       Date:  2019-04-22       Impact factor: 7.996

6.  MiR-212-3p inhibits cell proliferation and promotes apoptosis by targeting nuclear factor IA in bladder cancer.

Authors:  Xiaoming Wu; Hao Chen; Gaoyue Zhang; Jianhui Wu; Wei Zhu; Yanqin Gu; Y I He
Journal:  J Biosci       Date:  2019-09       Impact factor: 1.826

7.  Hypermethylation of FOXA1 and allelic loss of PTEN drive squamous differentiation and promote heterogeneity in bladder cancer.

Authors:  Vasty Osei-Amponsa; Jenna M Buckwalter; Lauren Shuman; Zongyu Zheng; Hironobu Yamashita; Vonn Walter; Thomas Wildermuth; Justine Ellis-Mohl; Chang Liu; Joshua I Warrick; Lisa M Shantz; Robert P Feehan; Hikmat Al-Ahmadie; Cathy Mendelsohn; Jay D Raman; Klaus H Kaestner; Xue-Ru Wu; David J DeGraff
Journal:  Oncogene       Date:  2019-10-21       Impact factor: 9.867

Review 8.  Characteristics and clinical significance of histological variants of bladder cancer.

Authors:  Marco Moschini; David D'Andrea; Stephan Korn; Yasin Irmak; Francesco Soria; Eva Compérat; Shahrokh F Shariat
Journal:  Nat Rev Urol       Date:  2017-09-12       Impact factor: 14.432

9.  Marked Response of a Hypermutated ACTH-Secreting Pituitary Carcinoma to Ipilimumab and Nivolumab.

Authors:  Andrew L Lin; Philip Jonsson; Viviane Tabar; T Jonathan Yang; John Cuaron; Katherine Beal; Marc Cohen; Michael Postow; Marc Rosenblum; Jinru Shia; Lisa M DeAngelis; Barry S Taylor; Robert J Young; Eliza B Geer
Journal:  J Clin Endocrinol Metab       Date:  2018-10-01       Impact factor: 5.958

Review 10.  Updates on the Genetics and Molecular Subtypes of Urothelial Carcinoma and Select Variants.

Authors:  Hikmat Al-Ahmadie; Gopa Iyer
Journal:  Surg Pathol Clin       Date:  2018-10-17
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