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Literature DB >> 2690074

Initiation of transcription on nucleosomal templates.

Abstract

We describe a simple method that uses curved DNAs to move nucleosomes relative to a sequence of interest. With this method, small changes in the association of a T7 RNA polymerase promoter with a nucleosome are shown to lead to significant changes in transcription efficiency.

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Year: 1989 PMID： 2690074 PMCID： PMC298593 DOI： 10.1073/pnas.86.24.9817

Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN： 0027-8424 Impact factor: 11.205

30 in total

1. The organization of histones and DNA in chromatin: evidence for an arginine-rich histone kernel.

Authors: R D Camerini-Otero; B Sollner-Webb; G Felsenfeld
Journal: Cell Date: 1976-07 Impact factor: 41.582

2. Nucleosome phasing on a DNA fragment from the replication origin of simian virus 40 and rephasing upon cruciform formation of the DNA.

Authors: C Nobile; J Nickol; R G Martin
Journal: Mol Cell Biol Date: 1986-08 Impact factor: 4.272

3. Deletion analysis of a DNA sequence that positions itself precisely on the nucleosome core.

Authors: N Ramsay
Journal: J Mol Biol Date: 1986-05-05 Impact factor: 5.469

4. Visualization of the bent helix in kinetoplast DNA by electron microscopy.

Authors: J Griffith; M Bleyman; C A Rauch; P A Kitchin; P T Englund
Journal: Cell Date: 1986-08-29 Impact factor: 41.582

5. A bacteriophage RNA polymerase transcribes in vitro through a nucleosome core without displacing it.

Authors: R Losa; D D Brown
Journal: Cell Date: 1987-08-28 Impact factor: 41.582

6. Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II.

Authors: J L Workman; R G Roeder
Journal: Cell Date: 1987-11-20 Impact factor: 41.582

7. DNA folding by histones: the kinetics of chromatin core particle reassembly and the interaction of nucleosomes with histones.

Authors: A Stein
Journal: J Mol Biol Date: 1979-05-15 Impact factor: 5.469

8. Physical characterization of a kinetoplast DNA fragment with unusual properties.

Authors: J C Marini; P N Effron; T C Goodman; C K Singleton; R D Wells; R M Wartell; P T Englund
Journal: J Biol Chem Date: 1984-07-25 Impact factor: 5.157

9. Control of RNA polymerase binding to chromatin by variations in linker histone composition.

Authors: R Hannon; E Bateman; J Allan; N Harborne; H Gould
Journal: J Mol Biol Date: 1984-11-25 Impact factor: 5.469

10. Facilitated diffusion of a DNA binding protein on chromatin.

Authors: R Hannon; E G Richards; H J Gould
Journal: EMBO J Date: 1986-12-01 Impact factor: 11.598

28 in total

1. A common feature shared by bent DNA structures locating in the eukaryotic promoter region.

Authors: M Miyano; T Kawashima; T Ohyama
Journal: Mol Biol Rep Date: 2001-03 Impact factor: 2.316

2. Histone contributions to the structure of DNA in the nucleosome.

Authors: J J Hayes; D J Clark; A P Wolffe
Journal: Proc Natl Acad Sci U S A Date: 1991-08-01 Impact factor: 11.205

3. Nucleosome positioning is determined by the (H3-H4)2 tetramer.

Authors: F Dong; K E van Holde
Journal: Proc Natl Acad Sci U S A Date: 1991-12-01 Impact factor: 11.205

4. A role for RNA synthesis in homologous pairing events.

Authors: H Kotani; E B Kmiec
Journal: Mol Cell Biol Date: 1994-09 Impact factor: 4.272

5. An intrachromosomal repeating unit based on DNA bending.

Authors: Y Wada-Kiyama; R Kiyama
Journal: Mol Cell Biol Date: 1996-10 Impact factor: 4.272

6. T7 RNA polymerase cannot transcribe through a highly knotted DNA template.

Authors: J Portugal; A Rodríguez-Campos
Journal: Nucleic Acids Res Date: 1996-12-15 Impact factor: 16.971

7. Thrombin-mediated transcriptional regulation using DNA aptamers in DNA-based cell-free protein synthesis.

Authors: Sukanya Iyer; Mitchel J Doktycz
Journal: ACS Synth Biol Date: 2013-09-26 Impact factor: 5.110

8. Trypanosoma brucei variant surface glycoprotein regulation involves coupled activation/inactivation and chromatin remodeling of expression sites.

Authors: M Navarro; G A Cross; E Wirtz
Journal: EMBO J Date: 1999-04-15 Impact factor: 11.598

9. Chromatin remodeling during Saccharomyces cerevisiae ADH2 gene activation.

Authors: L Verdone; G Camilloni; E Di Mauro; M Caserta
Journal: Mol Cell Biol Date: 1996-05 Impact factor: 4.272

10. The amino-terminal tails of the core histones and the translational position of the TATA box determine TBP/TFIIA association with nucleosomal DNA.

Authors: J S Godde; Y Nakatani; A P Wolffe
Journal: Nucleic Acids Res Date: 1995-11-25 Impact factor: 16.971