Literature DB >> 26895480

A Scalable Synthesis of α-L-Threose Nucleic Acid Monomers.

Sujay P Sau1, Nour Eddine Fahmi2, Jen-Yu Liao1, Saikat Bala1, John C Chaput1.   

Abstract

Recent advances in polymerase engineering have made it possible to copy information back and forth between DNA and artificial genetic polymers composed of TNA (α-L-threofuranosyl-(3',2') nucleic acid). This property, coupled with enhanced nuclease stability relative to natural DNA and RNA, warrants further investigation into the structural and functional properties of TNA as an artificial genetic polymer for synthetic biology. Here, we report a highly optimized chemical synthesis protocol for constructing multigram quantities of TNA nucleosides that can be readily converted to nucleoside 2'-phosphoramidites or 3'-triphosphates for solid-phase and polymerase-mediated synthesis, respectively. The synthetic protocol involves 10 chemical transformations with three crystallization steps and a single chromatographic purification, which results in an overall yield of 16-23% depending on the identity of the nucleoside (A, C, G, T).

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Year:  2016        PMID: 26895480     DOI: 10.1021/acs.joc.5b02768

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  17 in total

1.  Tritylation of Alcohols under Mild Conditions without Using Silver Salts.

Authors:  Shahien Shahsavari; Jinsen Chen; Travis Wigstrom; James Gooding; Alexander Gauronskas; Shiyue Fang
Journal:  Tetrahedron Lett       Date:  2016-07-18       Impact factor: 2.415

2.  RNA-Catalyzed Polymerization of Deoxyribose, Threose, and Arabinose Nucleic Acids.

Authors:  David P Horning; Saikat Bala; John C Chaput; Gerald F Joyce
Journal:  ACS Synth Biol       Date:  2019-05-03       Impact factor: 5.110

3.  Activation of Innate Immune Responses by a CpG Oligonucleotide Sequence Composed Entirely of Threose Nucleic Acid.

Authors:  Margaret J Lange; Donald H Burke; John C Chaput
Journal:  Nucleic Acid Ther       Date:  2018-12-11       Impact factor: 5.486

Review 4.  Functional Xeno Nucleic Acids for Biomedical Application.

Authors:  Tingting Tu; Shuangyan Huan; Guoliang Ke; Xiaobing Zhang
Journal:  Chem Res Chin Univ       Date:  2022-07-05       Impact factor: 2.726

5.  Structural Insights into Conformation Differences between DNA/TNA and RNA/TNA Chimeric Duplexes.

Authors:  Irina Anosova; Ewa A Kowal; Nicholas J Sisco; Sujay Sau; Jen-Yu Liao; Saikat Bala; Eriks Rozners; Martin Egli; John C Chaput; Wade D Van Horn
Journal:  Chembiochem       Date:  2016-07-29       Impact factor: 3.164

6.  A Tool for the Import of Natural and Unnatural Nucleoside Triphosphates into Bacteria.

Authors:  Aaron W Feldman; Emil C Fischer; Michael P Ledbetter; Jen-Yu Liao; John C Chaput; Floyd E Romesberg
Journal:  J Am Chem Soc       Date:  2018-01-17       Impact factor: 15.419

7.  Structural basis for TNA synthesis by an engineered TNA polymerase.

Authors:  Nicholas Chim; Changhua Shi; Sujay P Sau; Ali Nikoomanzar; John C Chaput
Journal:  Nat Commun       Date:  2017-11-27       Impact factor: 14.919

8.  Synthesis and polymerase activity of a fluorescent cytidine TNA triphosphate analogue.

Authors:  Hui Mei; Changhua Shi; Randi M Jimenez; Yajun Wang; Miramar Kardouh; John C Chaput
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

9.  A general strategy for expanding polymerase function by droplet microfluidics.

Authors:  Andrew C Larsen; Matthew R Dunn; Andrew Hatch; Sujay P Sau; Cody Youngbull; John C Chaput
Journal:  Nat Commun       Date:  2016-04-05       Impact factor: 14.919

10.  In vitro selection of an XNA aptamer capable of small-molecule recognition.

Authors:  Alexandra E Rangel; Zhe Chen; Tewoderos M Ayele; Jennifer M Heemstra
Journal:  Nucleic Acids Res       Date:  2018-09-19       Impact factor: 16.971

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