Literature DB >> 26886200

Utility of a next-generation sequencing-based gene panel investigation in German patients with genetically unclassified limb-girdle muscular dystrophy.

Marius Kuhn1,2, Dieter Gläser1, Pushpa Raj Joshi3, Stephan Zierz3, Stephan Wenninger4, Benedikt Schoser4, Marcus Deschauer5,6.   

Abstract

Limb-girdle muscular dystrophies (LGMDs) are genetically heterogeneous and the diagnostic work-up including conventional genetic testing using Sanger sequencing remains complex and often unsatisfactory. We performed targeted sequencing of 23 LGMD-related genes and 15 genes in which alterations result in a similar phenotype in 58 patients with genetically unclassified LGMDs. A genetic diagnosis was possible in 19 of 58 patients (33 %). LGMD2A was the most common form, followed by LGMD2L and LGMD2I. In two patients, pathogenic mutations were identified in genes that are not classified as LGMD genes (glycogen branching enzyme and valosin-containing protein). Thus, a focused next-generation sequencing-based gene panel is a rather satisfactory tool for the diagnosis in unclassified LGMDs.

Entities:  

Keywords:  Gene panel; Limb-girdle muscular dystrophies; Targeted next-generation sequencing

Mesh:

Year:  2016        PMID: 26886200     DOI: 10.1007/s00415-016-8036-0

Source DB:  PubMed          Journal:  J Neurol        ISSN: 0340-5354            Impact factor:   4.849


  25 in total

1.  Non-lethal neonatal neuromuscular variant of glycogenosis type IV with novel GBE1 mutations.

Authors:  Carla Fernandez; Cécile Halbert; André Maues De Paula; Valerié Lacroze; Roseline Froissart; Dominique Figarella-Branger; Brigitte Chabrol; Jean-François Pellissier
Journal:  Muscle Nerve       Date:  2010-02       Impact factor: 3.217

Review 2.  Diagnostic clinical genome and exome sequencing.

Authors:  Leslie G Biesecker; Robert C Green
Journal:  N Engl J Med       Date:  2014-06-19       Impact factor: 91.245

3.  The 2016 version of the gene table of monogenic neuromuscular disorders (nuclear genome).

Authors:  Jean-Claude Kaplan; Dalil Hamroun
Journal:  Neuromuscul Disord       Date:  2015-12-02       Impact factor: 4.296

4.  Use of Whole-Exome Sequencing for Diagnosis of Limb-Girdle Muscular Dystrophy: Outcomes and Lessons Learned.

Authors:  Roula Ghaoui; Sandra T Cooper; Monkol Lek; Kristi Jones; Alastair Corbett; Stephen W Reddel; Merrilee Needham; Christina Liang; Leigh B Waddell; Garth Nicholson; Gina O'Grady; Simranpreet Kaur; Royston Ong; Mark Davis; Carolyn M Sue; Nigel G Laing; Kathryn N North; Daniel G MacArthur; Nigel F Clarke
Journal:  JAMA Neurol       Date:  2015-12       Impact factor: 18.302

5.  A comprehensive genomic approach for neuromuscular diseases gives a high diagnostic yield.

Authors:  Arunkanth Ankala; Cristina da Silva; Francesca Gualandi; Alessandra Ferlini; Lora J H Bean; Christin Collins; Alice K Tanner; Madhuri R Hegde
Journal:  Ann Neurol       Date:  2014-12-17       Impact factor: 10.422

6.  A comprehensive genetic diagnosis of Chinese muscular dystrophy and congenital myopathy patients by targeted next-generation sequencing.

Authors:  Yi Dai; Xiaoming Wei; Yanhuan Zhao; Haitao Ren; Zhangzhang Lan; Yun Yang; Lin Chen; Liying Cui
Journal:  Neuromuscul Disord       Date:  2015-03-17       Impact factor: 4.296

7.  Are all the previously reported genetic variants in limb girdle muscular dystrophy genes pathogenic?

Authors:  Giuseppina Di Fruscio; Arcomaria Garofalo; Margherita Mutarelli; Marco Savarese; Vincenzo Nigro
Journal:  Eur J Hum Genet       Date:  2015-04-22       Impact factor: 4.246

8.  Next generation sequencing for molecular diagnosis of neuromuscular diseases.

Authors:  Nasim Vasli; Johann Böhm; Stéphanie Le Gras; Jean Muller; Cécile Pizot; Bernard Jost; Andoni Echaniz-Laguna; Vincent Laugel; Christine Tranchant; Rafaelle Bernard; Frédéric Plewniak; Serge Vicaire; Nicolas Levy; Jamel Chelly; Jean-Louis Mandel; Valérie Biancalana; Jocelyn Laporte
Journal:  Acta Neuropathol       Date:  2012-04-18       Impact factor: 17.088

Review 9.  Genetic basis of limb-girdle muscular dystrophies: the 2014 update.

Authors:  Vincenzo Nigro; Marco Savarese
Journal:  Acta Myol       Date:  2014-05

10.  Prevalence of genetic muscle disease in Northern England: in-depth analysis of a muscle clinic population.

Authors:  Fiona L M Norwood; Chris Harling; Patrick F Chinnery; Michelle Eagle; Kate Bushby; Volker Straub
Journal:  Brain       Date:  2009-09-18       Impact factor: 13.501

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  18 in total

1.  Genetic Profile of Patients with Limb-Girdle Muscle Weakness in the Chilean Population.

Authors:  Mathieu Cerino; Patricio González-Hormazábal; Mario Abaji; Sebastien Courrier; Francesca Puppo; Yves Mathieu; Alejandra Trangulao; Nicholas Earle; Claudia Castiglioni; Jorge Díaz; Mario Campero; Ricardo Hughes; Carmen Vargas; Rocío Cortés; Karin Kleinsteuber; Ignacio Acosta; J Andoni Urtizberea; Nicolas Lévy; Marc Bartoli; Martin Krahn; Lilian Jara; Pablo Caviedes; Svetlana Gorokhova; Jorge A Bevilacqua
Journal:  Genes (Basel)       Date:  2022-06-16       Impact factor: 4.141

2.  The sensitivity of exome sequencing in identifying pathogenic mutations for LGMD in the United States.

Authors:  Hemakumar M Reddy; Kyung-Ah Cho; Monkol Lek; Elicia Estrella; Elise Valkanas; Michael D Jones; Satomi Mitsuhashi; Basil T Darras; Anthony A Amato; Hart Gw Lidov; Catherine A Brownstein; David M Margulies; Timothy W Yu; Mustafa A Salih; Louis M Kunkel; Daniel G MacArthur; Peter B Kang
Journal:  J Hum Genet       Date:  2016-10-06       Impact factor: 3.172

3.  Exome sequences versus sequential gene testing in the UK highly specialised Service for Limb Girdle Muscular Dystrophy.

Authors:  Elizabeth Harris; Ana Topf; Rita Barresi; Judith Hudson; Helen Powell; James Tellez; Debbie Hicks; Anna Porter; Marta Bertoli; Teresinha Evangelista; Chiara Marini-Betollo; Ólafur Magnússon; Monkol Lek; Daniel MacArthur; Kate Bushby; Hanns Lochmüller; Volker Straub
Journal:  Orphanet J Rare Dis       Date:  2017-09-06       Impact factor: 4.123

4.  Mutational spectrum of Chinese LGMD patients by targeted next-generation sequencing.

Authors:  Meng Yu; Yiming Zheng; Suqin Jin; Qiang Gang; Qingqing Wang; Peng Yu; He Lv; Wei Zhang; Yun Yuan; Zhaoxia Wang
Journal:  PLoS One       Date:  2017-04-12       Impact factor: 3.240

5.  Genetic landscape and novel disease mechanisms from a large LGMD cohort of 4656 patients.

Authors:  Babi Ramesh Reddy Nallamilli; Samya Chakravorty; Akanchha Kesari; Alice Tanner; Arunkanth Ankala; Thomas Schneider; Cristina da Silva; Randall Beadling; John J Alexander; Syed Hussain Askree; Zachary Whitt; Lora Bean; Christin Collins; Satish Khadilkar; Pradnya Gaitonde; Rashna Dastur; Matthew Wicklund; Tahseen Mozaffar; Matthew Harms; Laura Rufibach; Plavi Mittal; Madhuri Hegde
Journal:  Ann Clin Transl Neurol       Date:  2018-12-01       Impact factor: 4.511

6.  Whole-exome sequencing identifies novel pathogenic mutations and putative phenotype-influencing variants in Polish limb-girdle muscular dystrophy patients.

Authors:  Jakub Piotr Fichna; Anna Macias; Marcin Piechota; Michał Korostyński; Anna Potulska-Chromik; Maria Jolanta Redowicz; Cezary Zekanowski
Journal:  Hum Genomics       Date:  2018-07-03       Impact factor: 4.639

7.  Targeted Next-Generation Sequencing in a Large Cohort of Genetically Undiagnosed Patients with Neuromuscular Disorders in Spain.

Authors:  Lidia Gonzalez-Quereda; Maria Jose Rodriguez; Jordi Diaz-Manera; Jorge Alonso-Perez; Eduard Gallardo; Andres Nascimento; Carlos Ortez; Daniel Natera-de Benito; Montse Olive; Laura Gonzalez-Mera; Adolfo Lopez de Munain; Miren Zulaica; Juan Jose Poza; Ivonne Jerico; Laura Torne; Pau Riera; Jose Milisenda; Aurora Sanchez; Gloria Garrabou; Isabel Llano; Marcos Madruga-Garrido; Pia Gallano
Journal:  Genes (Basel)       Date:  2020-05-11       Impact factor: 4.096

8.  A first-line diagnostic assay for limb-girdle muscular dystrophy and other myopathies.

Authors:  Dorota Monies; Hindi N Alhindi; Mohamed A Almuhaizea; Mohamed Abouelhoda; Anas M Alazami; Ewa Goljan; Banan Alyounes; Dyala Jaroudi; Abdulelah AlIssa; Khalid Alabdulrahman; Shazia Subhani; Mohamed El-Kalioby; Tariq Faquih; Salma M Wakil; Nada A Altassan; Brian F Meyer; Saeed Bohlega
Journal:  Hum Genomics       Date:  2016-09-27       Impact factor: 4.639

9.  Myalgia in 30 Patients with Suspected Myopathy.

Authors:  Diana Lehmann Urban; Elizabeth Lehmann; Leila Motlagh Scholle; Torsten Kraya
Journal:  Int J Environ Res Public Health       Date:  2020-04-06       Impact factor: 3.390

10.  Molecular diagnosis of muscular diseases in outpatient clinics: A Canadian perspective.

Authors:  Fanny Thuriot; Elaine Gravel; Caroline Buote; Marianne Doyon; Elvy Lapointe; Lydia Marcoux; Sandrine Larue; Amélie Nadeau; Sébastien Chénier; Paula J Waters; Pierre-Étienne Jacques; Serge Gravel; Sébastien Lévesque
Journal:  Neurol Genet       Date:  2020-03-13
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