| Literature DB >> 26870538 |
Alberto Cabrera1, Luis D Miranda2, Héctor Reyes1, Gerardo Aguirre1, Daniel Chávez1.
Abstract
In the crystal structure of the title compound, C12H9Cl2NO2, the mean planes through the quinoline and carboxyl-ate groups have r.m.s. deviations of 0.006 and 0.021 Å, respectively, and form a dihedral angle of 87.06 (19)°. In the crystal, mol-ecules are linked via very weak C-H⋯O hydrogen bonds, forming chains, which propagate along the c-axis direction.Entities:
Keywords: crystal structure; human immunodeficiency virus (HIV); hydrogen bonding; quinnoline
Year: 2015 PMID: 26870538 PMCID: PMC4719891 DOI: 10.1107/S2056989015020587
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C12H9Cl2NO2 | |
| Monoclinic, | Mo |
| Cell parameters from 4843 reflections | |
| θ = 2.4–25.4° | |
| µ = 0.53 mm−1 | |
| β = 100.262 (1)° | |
| Prism, colourless | |
| 0.50 × 0.25 × 0.16 mm |
| Bruker APEXII CCD area-detector diffractometer | |
| Detector resolution: 0.83 pixels mm-1 | θmax = 25.4°, θmin = 2.1° |
| ω scans | |
| 6785 measured reflections | |
| 2197 independent reflections | |
| 1833 reflections with |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.22 e Å−3 | |
| 2197 reflections | Δρmin = −0.21 e Å−3 |
| 156 parameters | Extinction correction: |
| 0 restraints | Extinction coefficient: 0.010 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Cl1 | 0.85142 (7) | 0.95554 (3) | 0.67524 (10) | 0.0847 (2) | |
| Cl2 | 0.49224 (5) | 0.73357 (2) | 0.59388 (7) | 0.05637 (19) | |
| O1 | 0.48324 (17) | 0.90370 (7) | 0.44065 (18) | 0.0701 (4) | |
| O2 | 0.48524 (14) | 0.89699 (6) | 0.75480 (17) | 0.0565 (3) | |
| N1 | 0.96891 (17) | 0.83536 (9) | 0.7101 (2) | 0.0567 (4) | |
| C2 | 0.8376 (2) | 0.86809 (9) | 0.6757 (2) | 0.0514 (4) | |
| C3 | 0.68405 (18) | 0.84036 (8) | 0.6379 (2) | 0.0435 (4) | |
| C4 | 0.67539 (18) | 0.77181 (8) | 0.6378 (2) | 0.0415 (4) | |
| C5 | 0.8137 (3) | 0.66071 (10) | 0.6754 (3) | 0.0621 (5) | |
| H5 | 0.7187 | 0.6372 | 0.6505 | 0.075* | |
| C6 | 0.9535 (3) | 0.62696 (13) | 0.7135 (3) | 0.0816 (7) | |
| H6 | 0.9531 | 0.5802 | 0.7143 | 0.098* | |
| C7 | 1.0976 (3) | 0.66121 (14) | 0.7514 (3) | 0.0838 (8) | |
| H7 | 1.1918 | 0.6371 | 0.7779 | 0.101* | |
| C8 | 1.1014 (2) | 0.72928 (13) | 0.7498 (3) | 0.0705 (6) | |
| H8 | 1.1981 | 0.7516 | 0.7748 | 0.085* | |
| C9 | 0.9593 (2) | 0.76660 (10) | 0.7105 (2) | 0.0511 (5) | |
| C10 | 0.81366 (19) | 0.73162 (9) | 0.6738 (2) | 0.0451 (4) | |
| C11 | 0.5396 (2) | 0.88399 (9) | 0.5963 (2) | 0.0478 (4) | |
| C12 | 0.3434 (2) | 0.93853 (11) | 0.7367 (3) | 0.0674 (5) | |
| H12A | 0.2575 | 0.9182 | 0.6481 | 0.081* | |
| H12B | 0.3638 | 0.9828 | 0.6897 | 0.081* | |
| C13 | 0.3010 (3) | 0.94358 (13) | 0.9279 (3) | 0.0858 (7) | |
| H13A | 0.2721 | 0.9000 | 0.9681 | 0.129* | |
| H13B | 0.2133 | 0.9738 | 0.9235 | 0.129* | |
| H13C | 0.3900 | 0.9602 | 1.0166 | 0.129* |
| Cl1 | 0.0773 (4) | 0.0613 (3) | 0.1107 (5) | −0.0197 (3) | 0.0034 (3) | −0.0015 (3) |
| Cl2 | 0.0445 (3) | 0.0641 (3) | 0.0597 (3) | −0.01024 (19) | 0.0070 (2) | −0.0018 (2) |
| O1 | 0.0713 (9) | 0.0848 (10) | 0.0506 (8) | 0.0213 (7) | 0.0009 (7) | 0.0096 (7) |
| O2 | 0.0498 (7) | 0.0681 (8) | 0.0529 (7) | 0.0183 (6) | 0.0129 (6) | 0.0081 (6) |
| N1 | 0.0395 (8) | 0.0795 (11) | 0.0508 (9) | −0.0050 (7) | 0.0070 (6) | −0.0022 (8) |
| C2 | 0.0455 (10) | 0.0606 (11) | 0.0475 (10) | −0.0066 (8) | 0.0064 (8) | −0.0016 (8) |
| C3 | 0.0393 (9) | 0.0544 (10) | 0.0367 (8) | 0.0011 (7) | 0.0069 (7) | 0.0000 (7) |
| C4 | 0.0377 (8) | 0.0548 (10) | 0.0325 (8) | −0.0016 (7) | 0.0073 (6) | −0.0002 (7) |
| C5 | 0.0719 (13) | 0.0630 (12) | 0.0520 (11) | 0.0133 (10) | 0.0128 (9) | 0.0027 (9) |
| C6 | 0.0980 (19) | 0.0785 (15) | 0.0680 (14) | 0.0429 (14) | 0.0143 (13) | 0.0066 (11) |
| C7 | 0.0768 (16) | 0.118 (2) | 0.0564 (13) | 0.0554 (16) | 0.0110 (11) | 0.0060 (13) |
| C8 | 0.0445 (11) | 0.120 (2) | 0.0476 (11) | 0.0239 (11) | 0.0085 (8) | −0.0009 (11) |
| C9 | 0.0412 (9) | 0.0793 (13) | 0.0337 (9) | 0.0101 (8) | 0.0090 (7) | −0.0001 (8) |
| C10 | 0.0451 (9) | 0.0608 (11) | 0.0301 (8) | 0.0100 (8) | 0.0088 (7) | 0.0016 (7) |
| C11 | 0.0440 (9) | 0.0499 (9) | 0.0481 (10) | −0.0006 (7) | 0.0042 (8) | 0.0018 (8) |
| C12 | 0.0544 (11) | 0.0706 (12) | 0.0778 (13) | 0.0229 (10) | 0.0136 (10) | 0.0079 (11) |
| C13 | 0.0641 (14) | 0.1089 (19) | 0.0878 (16) | 0.0215 (13) | 0.0227 (12) | −0.0130 (14) |
| Cl1—C2 | 1.745 (2) | C6—C7 | 1.396 (4) |
| Cl2—C4 | 1.7248 (16) | C6—H6 | 0.9300 |
| O1—C11 | 1.195 (2) | C7—C8 | 1.356 (4) |
| O2—C11 | 1.323 (2) | C7—H7 | 0.9300 |
| O2—C12 | 1.459 (2) | C8—C9 | 1.413 (3) |
| N1—C2 | 1.287 (2) | C8—H8 | 0.9300 |
| N1—C9 | 1.371 (3) | C9—C10 | 1.414 (2) |
| C2—C3 | 1.411 (2) | C12—C13 | 1.476 (3) |
| C3—C4 | 1.367 (2) | C12—H12A | 0.9700 |
| C3—C11 | 1.500 (2) | C12—H12B | 0.9700 |
| C4—C10 | 1.417 (2) | C13—H13A | 0.9600 |
| C5—C6 | 1.360 (3) | C13—H13B | 0.9600 |
| C5—C10 | 1.412 (3) | C13—H13C | 0.9600 |
| C5—H5 | 0.9300 | ||
| C11—O2—C12 | 116.84 (14) | C9—C8—H8 | 119.8 |
| C2—N1—C9 | 117.06 (15) | N1—C9—C8 | 118.38 (18) |
| N1—C2—C3 | 126.55 (18) | N1—C9—C10 | 122.85 (15) |
| N1—C2—Cl1 | 116.62 (14) | C8—C9—C10 | 118.77 (19) |
| C3—C2—Cl1 | 116.83 (14) | C5—C10—C9 | 119.45 (16) |
| C4—C3—C2 | 116.09 (15) | C5—C10—C4 | 124.43 (17) |
| C4—C3—C11 | 122.35 (14) | C9—C10—C4 | 116.12 (16) |
| C2—C3—C11 | 121.55 (15) | O1—C11—O2 | 125.64 (16) |
| C3—C4—C10 | 121.33 (15) | O1—C11—C3 | 123.90 (16) |
| C3—C4—Cl2 | 119.25 (12) | O2—C11—C3 | 110.46 (14) |
| C10—C4—Cl2 | 119.42 (13) | O2—C12—C13 | 107.24 (16) |
| C6—C5—C10 | 119.7 (2) | O2—C12—H12A | 110.3 |
| C6—C5—H5 | 120.2 | C13—C12—H12A | 110.3 |
| C10—C5—H5 | 120.2 | O2—C12—H12B | 110.3 |
| C5—C6—C7 | 121.2 (2) | C13—C12—H12B | 110.3 |
| C5—C6—H6 | 119.4 | H12A—C12—H12B | 108.5 |
| C7—C6—H6 | 119.4 | C12—C13—H13A | 109.5 |
| C8—C7—C6 | 120.5 (2) | C12—C13—H13B | 109.5 |
| C8—C7—H7 | 119.7 | H13A—C13—H13B | 109.5 |
| C6—C7—H7 | 119.7 | C12—C13—H13C | 109.5 |
| C7—C8—C9 | 120.4 (2) | H13A—C13—H13C | 109.5 |
| C7—C8—H8 | 119.8 | H13B—C13—H13C | 109.5 |
| H··· | ||||
| C7—H7···O1i | 0.93 | 2.69 | 3.586 (3) | 162 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C7—H7⋯O1i | 0.93 | 2.69 | 3.586 (3) | 162 |
Symmetry code: (i) .