Literature DB >> 24098221

4-Hy-droxy-6-methyl-pyridin-2(1H)-one.

Héctor Reyes1, Gerardo Aguirre, Daniel Chávez.   

Abstract

In the crystal structure of the title compound, C6H7NO2, N-H⋯O and O-H⋯O hydrogen bonds link the mol-ecules, forming a zigzag array along [001] and a layer structure parallel to the ab plane.

Entities:  

Year:  2013        PMID: 24098221      PMCID: PMC3790402          DOI: 10.1107/S1600536813024240

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential of related compounds in anti-HIV treatment, see: De Clercq (2005 ▶); Dollé et al. (1995 ▶); Medina-Franco et al. (2007 ▶).

Experimental

Crystal data

C6H7NO2 M = 125.13 Monoclinic, a = 4.7082 (5) Å b = 12.2988 (8) Å c = 10.0418 (7) Å β = 91.303 (7)° V = 581.32 (8) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 298 K 0.65 × 0.20 × 0.18 mm

Data collection

Bruker P4 diffractometer Absorption correction: ψ scan (XSCANS; Siemens, 1996 ▶) T min = 0.216, T max = 0.259 2445 measured reflections 1701 independent reflections 1269 reflections with I > 2σ(I) R int = 0.026 3 standard reflections every 97 reflections intensity decay: 9.4%

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.160 S = 1.06 1701 reflections 82 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.25 e Å−3 Data collection: XSCANS (Siemens, 1996 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813024240/im2437sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813024240/im2437Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813024240/im2437Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H7NO2F(000) = 264
Mr = 125.13Dx = 1.430 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 51 reflections
a = 4.7082 (5) Åθ = 6.6–12.3°
b = 12.2988 (8) ŵ = 0.11 mm1
c = 10.0418 (7) ÅT = 298 K
β = 91.303 (7)°Prismatic, colorless
V = 581.32 (8) Å30.65 × 0.20 × 0.18 mm
Z = 4
Bruker P4 diffractometer1269 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
Graphite monochromatorθmax = 30.0°, θmin = 2.6°
2θ/ω scansh = −1→6
Absorption correction: ψ scan (XSCANS; Siemens, 1996)k = −1→17
Tmin = 0.216, Tmax = 0.259l = −14→14
2445 measured reflections3 standard reflections every 97 reflections
1701 independent reflections intensity decay: 9.4%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.160H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
1701 reflections(Δ/σ)max < 0.001
82 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.25 e Å3
Experimental. IR: 3296, 3094, 2891, 1640 cm^-1. 1Ĥ NMR (CDCl~3~): δ 10.99 (s, NH-1), 10.40 (s, OH), 5.59 (s, H-3), 5.34 (s, H-5) 2.07 (s, 3H, CH~3~—C-6). ^13Ĉ NMR (CDCl~3~): δ 167.6, 164.8, 145.9, 98.2, 95.7, 18.5. MS m/e (int. rel): [M]^+^ 125 (100), 97 (16).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7844 (3)0.91089 (9)0.60053 (9)0.0364 (3)
O20.2045 (2)0.68616 (10)0.32761 (10)0.0396 (3)
H2B0.22920.65560.25620.059*
N10.7786 (3)0.93124 (10)0.37596 (11)0.0301 (3)
H1A0.90490.98130.38580.036*
C10.6811 (3)0.88072 (12)0.48782 (12)0.0288 (3)
C20.4786 (3)0.79830 (13)0.46911 (13)0.0326 (3)
H2A0.40260.76380.54260.039*
C30.3912 (3)0.76793 (12)0.34229 (13)0.0303 (3)
C40.4958 (3)0.82420 (12)0.23072 (14)0.0321 (3)
H4A0.43530.80530.14500.038*
C50.6858 (3)0.90624 (12)0.25012 (13)0.0293 (3)
C60.8049 (4)0.97389 (15)0.14088 (15)0.0403 (4)
H6D0.72670.95010.05670.060*
H6A1.00780.96620.14110.060*
H6B0.75661.04880.15480.060*
U11U22U33U12U13U23
O10.0491 (7)0.0370 (6)0.0227 (5)−0.0064 (5)−0.0062 (4)0.0009 (4)
O20.0483 (7)0.0407 (6)0.0297 (5)−0.0133 (5)0.0024 (5)−0.0057 (4)
N10.0360 (6)0.0315 (6)0.0227 (5)−0.0037 (5)−0.0032 (5)0.0022 (4)
C10.0352 (7)0.0297 (7)0.0214 (6)0.0034 (6)−0.0013 (5)0.0010 (5)
C20.0399 (8)0.0340 (7)0.0238 (6)−0.0026 (6)0.0015 (5)0.0009 (5)
C30.0324 (7)0.0311 (7)0.0273 (6)0.0002 (6)0.0000 (5)−0.0014 (5)
C40.0380 (8)0.0357 (8)0.0224 (6)0.0007 (6)−0.0021 (5)−0.0023 (5)
C50.0341 (7)0.0319 (7)0.0218 (6)0.0027 (6)−0.0004 (5)0.0016 (5)
C60.0534 (10)0.0420 (9)0.0255 (6)−0.0049 (8)0.0007 (6)0.0068 (6)
O1—C11.2768 (16)C2—H2A0.9300
O2—C31.3418 (18)C3—C41.415 (2)
O2—H2B0.8200C4—C51.359 (2)
N1—C51.3629 (17)C4—H4A0.9300
N1—C11.3719 (17)C5—C61.496 (2)
N1—H1A0.8600C6—H6D0.9600
C1—C21.401 (2)C6—H6A0.9600
C2—C31.3809 (19)C6—H6B0.9600
C3—O2—H2B109.5C5—C4—C3119.30 (13)
C5—N1—C1123.42 (13)C5—C4—H4A120.4
C5—N1—H1A118.3C3—C4—H4A120.4
C1—N1—H1A118.3C4—C5—N1119.76 (13)
O1—C1—N1117.79 (14)C4—C5—C6124.34 (13)
O1—C1—C2124.99 (13)N1—C5—C6115.90 (14)
N1—C1—C2117.21 (12)C5—C6—H6D109.5
C3—C2—C1120.46 (13)C5—C6—H6A109.5
C3—C2—H2A119.8H6D—C6—H6A109.5
C1—C2—H2A119.8C5—C6—H6B109.5
O2—C3—C2119.01 (13)H6D—C6—H6B109.5
O2—C3—C4121.24 (12)H6A—C6—H6B109.5
C2—C3—C4119.74 (14)
C5—N1—C1—O1179.84 (14)O2—C3—C4—C5−179.71 (13)
C5—N1—C1—C21.0 (2)C2—C3—C4—C51.3 (2)
O1—C1—C2—C3−176.62 (15)C3—C4—C5—N11.8 (2)
N1—C1—C2—C32.2 (2)C3—C4—C5—C6−178.05 (15)
C1—C2—C3—O2177.69 (13)C1—N1—C5—C4−3.0 (2)
C1—C2—C3—C4−3.3 (2)C1—N1—C5—C6176.88 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.861.982.835 (2)175
O2—H2B···O1ii0.821.792.609 (2)180
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O1i 0.861.982.835 (2)175
O2—H2B⋯O1ii 0.821.792.609 (2)180

Symmetry codes: (i) ; (ii) .

  4 in total

Review 1.  New approaches toward anti-HIV chemotherapy.

Authors:  Erik De Clercq
Journal:  J Med Chem       Date:  2005-03-10       Impact factor: 7.446

Review 2.  Pyridin-2(1H)-ones: a promising class of HIV-1 non-nucleoside reverse transcriptase inhibitors.

Authors:  José Luis Medina-Franco; Karina Martínez-Mayorga; Cecilia Juárez-Gordiano; Rafael Castillo
Journal:  ChemMedChem       Date:  2007-08       Impact factor: 3.466

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  A new series of pyridinone derivatives as potent non-nucleoside human immunodeficiency virus type 1 specific reverse transcriptase inhibitors.

Authors:  V Dollé; E Fan; C H Nguyen; A M Aubertin; A Kirn; M L Andreola; G Jamieson; L Tarrago-Litvak; E Bisagni
Journal:  J Med Chem       Date:  1995-11-10       Impact factor: 7.446

  4 in total
  1 in total

1.  Crystal structure of ethyl 2,4-di-chloro-quinoline-3-carboxyl-ate.

Authors:  Alberto Cabrera; Luis D Miranda; Héctor Reyes; Gerardo Aguirre; Daniel Chávez
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-11-14
  1 in total

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