Literature DB >> 26870536

Crystal structure of 1,1'-[selanediyl-bis(4,1-phenyl-ene)]bis-(2-chloro-ethan-1-one).

Hazem Bouraoui1, Ali Boudjada1, Noudjoud Hamdouni1, Youcef Mechehoud2, Jean Meinnel3.   

Abstract

In the title mol-ecule, C16H12Cl2O2Se, the C-Se-C angle is 100.05 (14)°, with the dihedral angle between the planes of the benzene rings being 69.92 (17)°. The average endocyclic angles (Se-Car-Car; ar = aromatic) facing the Se atom are 120.0 (3) and 119.4 (3)°. The Se atom is essentially coplanar with the benzene rings, with Se-Car-Car-Car torsion angles of -179.2 (3) and -179.7 (3)°. In the crystal, mol-ecules are linked via C-H⋯O hydrogen bonds forming chains propagating along the a-axis direction. The chains are linked via C-H⋯π inter-actions, forming a three-dimensional network.

Entities:  

Keywords:  C—H⋯O hydrogen bonds; crystal structure; organoselenium; selenium

Year:  2015        PMID: 26870536      PMCID: PMC4719889          DOI: 10.1107/S2056989015019969

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For a review of organoselenium chemistry, see: Procter (2001 ▸). For there uses as reagents and inter­mediates in organic synthesis, see: Zade et al. (2005 ▸). For their use as inter­mediates in the synthesis of pharmaceuticals, see: Woods et al. (1993 ▸), and fine chemicals and polymers, see: Hellberg et al. (1997 ▸). For their biological properties, see: Zhu & Jiang (2008 ▸); Anderson et al. (1996 ▸); Abdel-Hafez (2008 ▸). For details of how selenium compounds play important roles in protecting the heart, preventing cancer and cardiovascular diseases, see: Yang et al. (2005 ▸). For details of how selenium functions as an anti­oxidant in conjunction with vitamin E, see: Ellis et al. (1984 ▸). For the synthesis, see: Mechehoud et al. (2010 ▸). For related structures, see: Zuo (2013 ▸); Bouraoui et al. (2011 ▸).

Experimental

Crystal data

C16H12Cl2O2Se M = 386.12 Triclinic a = 7.9664 (7) Å b = 9.2804 (10) Å c = 10.9045 (12) Å α = 104.612 (9)° β = 95.886 (8)° γ = 91.102 (8)° V = 775.14 (14) Å3 Z = 2 Mo Kα radiation μ = 2.77 mm−1 T = 293 K 0.13 × 0.08 × 0.04 mm

Data collection

Oxford Diffraction Xcalibur diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013 ▸) T min = 0.519, T max = 1.000 8193 measured reflections 4862 independent reflections 2878 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.134 S = 1.04 4862 reflections 190 parameters H-atom parameters constrained Δρmax = 0.59 e Å−3 Δρmin = −0.49 e Å−3

Data collection: Xcalibur (Oxford Diffraction, 2002 ▸); cell refinement: CrysAlis RED (Oxford Diffraction, 2002 ▸); data reduction: CrysAlis RED; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: PLATON (Spek, 2009 ▸); software used to prepare material for publication: SHELXL2014 and PLATON. Crystal structure: contains datablock(s) Global, I. DOI: 10.1107/S2056989015019969/su5221sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015019969/su5221Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015019969/su5221Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015019969/su5221fig1.tif The mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. Click here for additional data file. b . DOI: 10.1107/S2056989015019969/su5221fig2.tif Crystal packing of the title compound, viewed along the b axis. The hydrogen bonds are shown as dashed lines (see Table 1). CCDC reference: 1432588 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H12Cl2O2SeZ = 2
Mr = 386.12F(000) = 384
Triclinic, P1Dx = 1.654 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.7107 Å
a = 7.9664 (7) ÅCell parameters from 1842 reflections
b = 9.2804 (10) Åθ = 3.9–27.7°
c = 10.9045 (12) ŵ = 2.77 mm1
α = 104.612 (9)°T = 293 K
β = 95.886 (8)°Needle, colourless
γ = 91.102 (8)°0.13 × 0.08 × 0.04 mm
V = 775.14 (14) Å3
Oxford Diffraction Xcalibur diffractometer2878 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
ω/2θ scansθmax = 32.0°, θmin = 3.4°
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013)h = −11→11
Tmin = 0.519, Tmax = 1.000k = −13→13
8193 measured reflectionsl = −16→11
4862 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.134H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.047P)2 + 0.1701P] where P = (Fo2 + 2Fc2)/3
4862 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.59 e Å3
0 restraintsΔρmin = −0.49 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Se10.53262 (4)0.10191 (4)0.76583 (4)0.05281 (16)
Cl1−0.25879 (14)−0.40473 (13)0.99518 (12)0.0730 (3)
Cl20.13155 (14)0.78058 (13)0.40236 (15)0.0818 (4)
O1−0.2370 (3)−0.1702 (3)0.8662 (3)0.0610 (7)
O20.1088 (4)0.4605 (3)0.3572 (3)0.0714 (8)
C10.3337 (4)0.0067 (4)0.8013 (3)0.0394 (8)
C20.1712 (4)0.0498 (4)0.7722 (4)0.0440 (8)
H210.15480.12710.73280.053*
C30.0353 (4)−0.0224 (4)0.8020 (3)0.0423 (8)
H31−0.07290.00710.78250.051*
C40.0557 (4)−0.1385 (3)0.8605 (3)0.0362 (7)
C50.2200 (4)−0.1800 (4)0.8892 (3)0.0392 (8)
H510.2365−0.25740.92850.047*
C60.3576 (4)−0.1082 (4)0.8603 (3)0.0406 (8)
H610.4661−0.13680.88030.049*
C70.4308 (4)0.2302 (4)0.6692 (4)0.0415 (8)
C80.3485 (5)0.1721 (4)0.5489 (4)0.0488 (9)
H810.34150.06950.51390.059*
C90.2762 (5)0.2656 (4)0.4798 (4)0.0470 (8)
H910.22000.22560.39890.056*
C100.2872 (4)0.4188 (4)0.5306 (3)0.0402 (8)
C110.3757 (5)0.4760 (4)0.6494 (4)0.0490 (9)
H1110.38790.57870.68290.059*
C120.4456 (5)0.3831 (4)0.7184 (4)0.0500 (9)
H1210.50330.42320.79890.060*
C13−0.0979 (4)−0.2116 (4)0.8894 (3)0.0425 (8)
C14−0.0706 (5)−0.3401 (4)0.9497 (4)0.0514 (9)
H1410.0117−0.30871.02440.062*
H142−0.0248−0.42140.88980.062*
C150.1994 (4)0.5136 (4)0.4539 (4)0.0465 (9)
C160.2244 (5)0.6811 (4)0.5070 (4)0.0540 (10)
H1610.34440.70760.52430.065*
H1620.17580.71010.58720.065*
U11U22U33U12U13U23
Se10.03407 (19)0.0680 (3)0.0687 (3)−0.00036 (16)0.00438 (18)0.0409 (2)
Cl10.0585 (6)0.0786 (7)0.0896 (9)−0.0193 (5)0.0163 (6)0.0345 (6)
Cl20.0582 (6)0.0802 (7)0.1284 (12)0.0049 (5)0.0010 (7)0.0700 (8)
O10.0318 (12)0.0782 (19)0.083 (2)0.0059 (12)0.0080 (13)0.0385 (16)
O20.081 (2)0.0686 (19)0.060 (2)0.0050 (16)−0.0141 (17)0.0170 (16)
C10.0312 (15)0.0460 (18)0.044 (2)0.0008 (13)0.0040 (15)0.0170 (16)
C20.0387 (17)0.0477 (19)0.053 (2)0.0035 (15)0.0039 (16)0.0268 (17)
C30.0326 (15)0.0475 (19)0.050 (2)0.0065 (14)0.0018 (15)0.0183 (17)
C40.0303 (15)0.0424 (17)0.0371 (19)0.0027 (13)0.0037 (14)0.0124 (15)
C50.0334 (15)0.0426 (18)0.048 (2)0.0066 (13)0.0045 (15)0.0242 (16)
C60.0277 (14)0.0510 (19)0.048 (2)0.0090 (14)0.0006 (14)0.0218 (16)
C70.0338 (16)0.0500 (19)0.046 (2)−0.0004 (14)0.0077 (16)0.0214 (17)
C80.055 (2)0.0373 (18)0.054 (2)−0.0036 (16)0.0018 (19)0.0130 (17)
C90.0465 (19)0.050 (2)0.043 (2)−0.0039 (16)−0.0016 (17)0.0108 (17)
C100.0383 (17)0.0430 (18)0.044 (2)−0.0007 (14)0.0103 (16)0.0178 (16)
C110.061 (2)0.0396 (19)0.045 (2)−0.0020 (17)0.0022 (19)0.0107 (17)
C120.054 (2)0.055 (2)0.040 (2)−0.0037 (18)−0.0008 (18)0.0127 (18)
C130.0337 (16)0.053 (2)0.042 (2)−0.0001 (14)0.0036 (15)0.0146 (17)
C140.0443 (19)0.057 (2)0.059 (3)−0.0034 (17)0.0112 (19)0.0253 (19)
C150.0394 (17)0.054 (2)0.053 (2)0.0040 (16)0.0098 (18)0.0240 (19)
C160.047 (2)0.049 (2)0.077 (3)0.0029 (16)0.009 (2)0.036 (2)
Se1—C71.919 (3)C7—C81.377 (5)
Se1—C11.920 (3)C7—C121.383 (5)
Cl1—C141.766 (4)C8—C91.383 (5)
Cl2—C161.757 (4)C8—H810.9300
O1—C131.203 (4)C9—C101.387 (5)
O2—C151.202 (5)C9—H910.9300
C1—C61.384 (5)C10—C111.382 (5)
C1—C21.392 (4)C10—C151.495 (5)
C2—C31.371 (5)C11—C121.372 (5)
C2—H210.9300C11—H1110.9300
C3—C41.388 (5)C12—H1210.9300
C3—H310.9300C13—C141.510 (5)
C4—C51.398 (4)C14—H1410.9700
C4—C131.487 (4)C14—H1420.9700
C5—C61.376 (4)C15—C161.517 (5)
C5—H510.9300C16—H1610.9700
C6—H610.9300C16—H1620.9700
C7—Se1—C1100.05 (14)C11—C10—C9118.8 (3)
C6—C1—C2120.0 (3)C11—C10—C15123.3 (3)
C6—C1—Se1117.0 (2)C9—C10—C15117.9 (3)
C2—C1—Se1123.0 (3)C12—C11—C10120.8 (3)
C3—C2—C1119.7 (3)C12—C11—H111119.6
C3—C2—H21120.2C10—C11—H111119.6
C1—C2—H21120.2C11—C12—C7120.4 (4)
C2—C3—C4121.5 (3)C11—C12—H121119.8
C2—C3—H31119.2C7—C12—H121119.8
C4—C3—H31119.2O1—C13—C4121.8 (3)
C3—C4—C5118.0 (3)O1—C13—C14121.6 (3)
C3—C4—C13118.3 (3)C4—C13—C14116.7 (3)
C5—C4—C13123.7 (3)C13—C14—Cl1112.6 (3)
C6—C5—C4121.1 (3)C13—C14—H141109.1
C6—C5—H51119.4Cl1—C14—H141109.1
C4—C5—H51119.4C13—C14—H142109.1
C5—C6—C1119.7 (3)Cl1—C14—H142109.1
C5—C6—H61120.1H141—C14—H142107.8
C1—C6—H61120.1O2—C15—C10121.9 (3)
C8—C7—C12119.4 (3)O2—C15—C16121.3 (4)
C8—C7—Se1120.7 (3)C10—C15—C16116.7 (3)
C12—C7—Se1119.9 (3)C15—C16—Cl2112.6 (3)
C7—C8—C9120.2 (3)C15—C16—H161109.1
C7—C8—H81119.9Cl2—C16—H161109.1
C9—C8—H81119.9C15—C16—H162109.1
C8—C9—C10120.4 (4)Cl2—C16—H162109.1
C8—C9—H91119.8H161—C16—H162107.8
C10—C9—H91119.8
C6—C1—C2—C3−0.2 (5)C15—C10—C11—C12176.3 (3)
Se1—C1—C2—C3−179.2 (3)C10—C11—C12—C71.0 (6)
C1—C2—C3—C4−0.1 (6)C8—C7—C12—C111.5 (5)
C2—C3—C4—C50.3 (5)Se1—C7—C12—C11179.0 (3)
C2—C3—C4—C13−179.8 (3)C3—C4—C13—O1−1.9 (5)
C3—C4—C5—C60.0 (5)C5—C4—C13—O1178.0 (4)
C13—C4—C5—C6−180.0 (3)C3—C4—C13—C14178.4 (3)
C4—C5—C6—C1−0.3 (5)C5—C4—C13—C14−1.7 (5)
C2—C1—C6—C50.4 (5)O1—C13—C14—Cl1−6.1 (5)
Se1—C1—C6—C5179.4 (3)C4—C13—C14—Cl1173.6 (3)
C12—C7—C8—C9−2.2 (5)C11—C10—C15—O2−172.1 (4)
Se1—C7—C8—C9−179.7 (3)C9—C10—C15—O26.9 (5)
C7—C8—C9—C100.5 (5)C11—C10—C15—C165.5 (5)
C8—C9—C10—C111.9 (5)C9—C10—C15—C16−175.5 (3)
C8—C9—C10—C15−177.1 (3)O2—C15—C16—Cl2−7.9 (5)
C9—C10—C11—C12−2.7 (5)C10—C15—C16—Cl2174.6 (2)
D—H···AD—HH···AD···AD—H···A
C6—H61···O1i0.932.413.288 (4)158
C16—H161···Cg2ii0.972.823.611 (4)140
C16—H162···Cg1iii0.972.923.749 (4)144
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of benzene rings C1–C6 and C7–C12, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C6—H61⋯O1i 0.932.413.288 (4)158
C16—H161⋯Cg2ii 0.972.823.611 (4)140
C16—H162⋯Cg1iii 0.972.923.749 (4)144

Symmetry codes: (i) ; (ii) ; (iii) .

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